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The map label for this gene is tse [H]

Identifier: 120613128

GI number: 120613128

Start: 4992949

End: 4994766

Strand: Direct

Name: tse [H]

Synonym: Aave_4495

Alternate gene names: 120613128

Gene position: 4992949-4994766 (Clockwise)

Preceding gene: 120613127

Following gene: 120613132

Centisome position: 93.28

GC content: 70.13

Gene sequence:

>1818_bases
ATGACCCTCTTTCGCAACATGAAGCTCGGCACCATGCTCGGCATCGGTTTCGCCATCGTCATCGGCCTCAGCTTCATGGT
CGCCGCCTATGGCCGCTTCCAGCTCGACTCTACCGGCAAGACCCTGCATGCCCTGTCGAAGGAGCGGATGGACATCCTGC
TGCAGCTCCAGCAGGTCAAGGACAACACCAACGTCGTCGCCCGCGCGGTACGCAACCTGGCCCTGCTGGAAGACGAGGCC
GCCATGGCCGAAGAGAAGAAGCGGCTCGATGGCGTGGTCTCCGACACCTCGCAGATCATGGCCGCGCTGCAGCAGCGGGT
GGTTTCCGCCGAAGGCCGCGCGCTCATGGGCCGCATCGCCGAGGCGCGCCCGCAATTCCTGGGCACCGTGGACAAGGCGG
CGAAGCTCGGCCTGGCCAACGACCTGGCGAATGCGCGCACGGTGGTGCTCGGCGAGATGCGCACCGCGCAGAACGTCTAC
TTCAAGGCCGTGGAGGACATGATCTCCTACCAGCGCAAGGTGACCACGGACATGGCGGAATCGTCCAGCAGCGGTGCCAC
CGCCGCCGGCAACACCATGATCGTGCTGGCAGTGCTGTCGGCTGCGATCGGCGCGCTCGTCGCCTGGTCGATCACGCGCC
GCGTGAAGGGCCAGCTCGGCGGCGAACCCGCCTACGCAGCACAGATCGCCCAGGAAGTCGCCCGCGGCAACCTCGCCGTC
CACGTCGACCTGCGCCCCGGCGACTCCTCCTCCGTCCTCGCCGCCATGGGCGCCATGCGCGCCAACCTCGCTAAAGTAGT
CTCCGAAGTCCGCCACAGCAGCGAATCCATCGCCACCGGCGCTTCCGAGATCGCCACCGGCAACGCCGACCTCAGCCAGC
GCACCGAGGAGCAGGCCTCCAACCTCCAGCAGACCGCCGCCTCCATGGAGGAGATGGCCTCCACCGTCAAGCAGAACGCC
GACACCGTGCGCACCGCCTCCCAGCTCGCCTCCTCGGCCTCCGCCACCGCCGCGCGCGGCGGCGACGTCGTGGGCAACGT
CGTGCGCACCATGGAGGACATCACCGCCTCCTCCCGCAAGATCGGCGACATCATCGGCGTCATCGACTCCATCGCCTTCC
AGACCAACATCCTCGCCCTCAACGCCGCCGTCGAGGCCGCACGCGCCGGCGAACAGGGCCGGGGCTTCGCCGTCGTCGCC
GGCGAGGTGCGCACCCTCGCGCAGCGCTCCGCACAGGCCGCCAAGGAGATCAAGGCCCTCATCGGCGAGAGCGTCTCCAA
GGTCGAGACCGGCTCGCAGCTCGTGGGCGAGGCCGGCACCACCATGGGAGAAATCGTCGAGCAGGCCCGCCGCGTCGCCG
ACCTCATCGCCGAGATCGGAGCGGCCACCCACGAGCAGGAGCAGGGCATCTCCCAGGTGAGCGACGCCGTCAACCAGCTC
GACCAGGTCACCCAGCAGAACGCCGCGCTCGTGGAGGAATCCGCCGCCGCCGCCGACAGCCTCAACTCCCAGGCCGCGCG
CCTCGTGCAGCTCGTCAGCGTCTTCCAGGTCGATGCCAGTGCCTCCCAGGCCGTCATCGCACAGGCGCAGTCGCGCAGCC
GCGATACCGCCCGCGCCGCCTCCGCCGCGCTGCAGCATGCCAAGGCACCGGCTGCCGCGCAGCGCACGGCTCCCGGCATC
GCCGCCGCACCGGCAAAGCCCGCCCGGGCATCTGCGCCGGCCGCCACCCGCCCGGCACTCGCTCCTGCCCAGCAGCCGGC
CGCTCCCGCCCCCGCCAGGGCCGCCGGGTCCGGCAACGACGACTGGGAAACCTTCTGA

Upstream 100 bases:

>100_bases
GCACCATTTCAGCAATTTACTCACAATTGCACAACAATCCGTTACTACCCGGCGCCGGATGCCCGGCTCCGCTGCCAACG
ACCCGCCAGGAAGTAACAAC

Downstream 100 bases:

>100_bases
CGGACAGCCCGGCTCAGGGGCGCAGCCAGACCTGCATGCGCGGGTAAGGCTCGCCTCCCAGCGCCGCGGCCTGCGCGGGC
GACAGCGCCATGCCCGCCGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MTLFRNMKLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVKDNTNVVARAVRNLALLEDEA
AMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIAEARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVY
FKAVEDMISYQRKVTTDMAESSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKGQLGGEPAYAAQIAQEVARGNLAV
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASEIATGNADLSQRTEEQASNLQQTAASMEEMASTVKQNA
DTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRKIGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRTLAQRSAQAAKEIKALIGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDASASQAVIAQAQSRSRDTARAASAALQHAKAPAAAQRTAPGI
AAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGNDDWETF

Sequences:

>Translated_605_residues
MTLFRNMKLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVKDNTNVVARAVRNLALLEDEA
AMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIAEARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVY
FKAVEDMISYQRKVTTDMAESSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKGQLGGEPAYAAQIAQEVARGNLAV
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASEIATGNADLSQRTEEQASNLQQTAASMEEMASTVKQNA
DTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRKIGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVA
GEVRTLAQRSAQAAKEIKALIGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDASASQAVIAQAQSRSRDTARAASAALQHAKAPAAAQRTAPGI
AAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGNDDWETF
>Mature_604_residues
TLFRNMKLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVKDNTNVVARAVRNLALLEDEAA
MAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIAEARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVYF
KAVEDMISYQRKVTTDMAESSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKGQLGGEPAYAAQIAQEVARGNLAVH
VDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASEIATGNADLSQRTEEQASNLQQTAASMEEMASTVKQNAD
TVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRKIGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAG
EVRTLAQRSAQAAKEIKALIGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQLD
QVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDASASQAVIAQAQSRSRDTARAASAALQHAKAPAAAQRTAPGIA
AAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGNDDWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=292, Percent_Identity=60.958904109589, Blast_Score=295, Evalue=8e-81,
Organism=Escherichia coli, GI1788194, Length=292, Percent_Identity=56.1643835616438, Blast_Score=290, Evalue=2e-79,
Organism=Escherichia coli, GI2367378, Length=288, Percent_Identity=60.7638888888889, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1787690, Length=387, Percent_Identity=47.0284237726098, Blast_Score=285, Evalue=5e-78,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=42.8134556574924, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 62659; Mature: 62528

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFRNMKLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
DNTNVVARAVRNLALLEDEAAMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH
EARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVYFKAVEDMISYQRKVTTDMAE
HHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKGQLGGEPAYAAQIAQEVARGNLAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEE
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASEIATGNADLSQRTEEQAS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH
NLQQTAASMEEMASTVKQNADTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAQAAKEIKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDASASQAVIAQAQSRSRDTARAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
SAALQHAKAPAAAQRTAPGIAAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGND
HHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DWETF
CCCCC
>Mature Secondary Structure 
TLFRNMKLGTMLGIGFAIVIGLSFMVAAYGRFQLDSTGKTLHALSKERMDILLQLQQVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
DNTNVVARAVRNLALLEDEAAMAEEKKRLDGVVSDTSQIMAALQQRVVSAEGRALMGRIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH
EARPQFLGTVDKAAKLGLANDLANARTVVLGEMRTAQNVYFKAVEDMISYQRKVTTDMAE
HHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSSSGATAAGNTMIVLAVLSAAIGALVAWSITRRVKGQLGGEPAYAAQIAQEVARGNLAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEE
HVDLRPGDSSSVLAAMGAMRANLAKVVSEVRHSSESIATGASEIATGNADLSQRTEEQAS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHH
NLQQTAASMEEMASTVKQNADTVRTASQLASSASATAARGGDVVGNVVRTMEDITASSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
IGDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAQAAKEIKAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
IGESVSKVETGSQLVGEAGTTMGEIVEQARRVADLIAEIGAATHEQEQGISQVSDAVNQL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DQVTQQNAALVEESAAAADSLNSQAARLVQLVSVFQVDASASQAVIAQAQSRSRDTARAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
SAALQHAKAPAAAQRTAPGIAAAPAKPARASAPAATRPALAPAQQPAAPAPARAAGSGND
HHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DWETF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]