Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120613127

Identifier: 120613127

GI number: 120613127

Start: 4991772

End: 4992764

Strand: Direct

Name: 120613127

Synonym: Aave_4494

Alternate gene names: NA

Gene position: 4991772-4992764 (Clockwise)

Preceding gene: 120613126

Following gene: 120613128

Centisome position: 93.26

GC content: 71.0

Gene sequence:

>993_bases
ATGACGAAGTACCTGCCGGCGCTGCGGCGCACCGGAGCCGCACTCCTCATGGCCATCGCGGTATCGGGCCCATGGTCCGC
GGCGCACGCCGAGGGCTACCCGGCCAGGCCCGTGCAGCTCGTCGTCCCCTTCCCTCCCGGCGGGGCCGTGGACATCGTCG
GCCGGCTGATCGGCAAGCCGCTGGGCGACGGCCTGGGCCAGCCGGTGGTGGTCGAGAACAAGGCCGGCGCCGGCACCATC
GTGGGGGCGGCCTTCGTGGCCAATGCGCCGGCCGACGGCTACACGCTGCTGATCAGTTCGGGATCGACATTCACCGGCAA
TCCTGCGCTCAACGCCAAACTGCCGTACGACCCCGTGCGGAGCTACGAACCCATCGGCATGGTGGCGCGGGTGCCGCTGG
TGCTGCTGGCCCACCGCGACGTACCGGCCCGCAACCTGGCGGAGGTGATCGCCGCGGTGCAGCGCGCACCAGACAAGTTT
TCCTACGGATCGTTCGGCAACGGCACCACGGGCCACTTCGCGGGCGAGCTGCTGTGGGCGGCCACCGGCATCCGGCCGGT
GCACGTGCCCTACCGCGGCAGCGCGCCGGCCATGGCGGACCTGATGGGCGGGCAGATTCCCTTCACCATCGACACGGTAG
CCGCCGCACTGCCGCAGTTGAAGGCGGGCAAGATCAAGGCCATCGCCGTCATGGGCGCCACGCGCGCCACCCAACTGCCC
GATGTGCCCACCGTGGCGGAAAGCGGCTTTCCAGGGTTCGCCGCGGATTCCTGGCTCGCCGTCGTGGCGCCGCGCGGCCT
GCCGGCCGATGCCAGGGCCCGGCTGCAAAAAGCCCTGGGCGAGGCGATGGCGGCGCCCGAAGTCCGCAGTAAGCTCATCG
CCAGCGGGCTGGAGCCCGCCTACGAATCTGCCGATGCGGTGCTGTCGCGCATCGAGGATGAACTGCCGCGCATGCGCGCC
ATCGCGCAGCGCGCGAACATCCGCCCTGAATGA

Upstream 100 bases:

>100_bases
GTGCCGGCGCTCAACGCCTACAGCTTCCTGTTCCGCAACGGCTGAACGCCTGCCGCAGCCCGCGCCGTCCCACCGTTCCC
CCACCGGAAGGAGCCCCGAA

Downstream 100 bases:

>100_bases
ACCCTGGCCGGAGCACGGGCACTACACCTTCGCGGCAACGCTGTAGGCAAAATTCGCCTATCTCGCATTTTTCGTCTGGA
AATAGCACCATTTCAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKPLGDGLGQPVVVENKAGAGTI
VGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVRSYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKF
SYGSFGNGTTGHFAGELLWAATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP
DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPAYESADAVLSRIEDELPRMRA
IAQRANIRPE

Sequences:

>Translated_330_residues
MTKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKPLGDGLGQPVVVENKAGAGTI
VGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVRSYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKF
SYGSFGNGTTGHFAGELLWAATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP
DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPAYESADAVLSRIEDELPRMRA
IAQRANIRPE
>Mature_329_residues
TKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKPLGDGLGQPVVVENKAGAGTIV
GAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVRSYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKFS
YGSFGNGTTGHFAGELLWAATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLPD
VPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPAYESADAVLSRIEDELPRMRAI
AQRANIRPE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34155; Mature: 34024

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKP
CCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCH
LGDGLGQPVVVENKAGAGTIVGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVR
HHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCC
SYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKFSYGSFGNGTTGHFAGELLWA
CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
ATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP
HCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPA
CCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
YESADAVLSRIEDELPRMRAIAQRANIRPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKP
CCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCH
LGDGLGQPVVVENKAGAGTIVGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVR
HHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCC
SYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKFSYGSFGNGTTGHFAGELLWA
CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
ATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP
HCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPA
CCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
YESADAVLSRIEDELPRMRAIAQRANIRPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]