| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613127
Identifier: 120613127
GI number: 120613127
Start: 4991772
End: 4992764
Strand: Direct
Name: 120613127
Synonym: Aave_4494
Alternate gene names: NA
Gene position: 4991772-4992764 (Clockwise)
Preceding gene: 120613126
Following gene: 120613128
Centisome position: 93.26
GC content: 71.0
Gene sequence:
>993_bases ATGACGAAGTACCTGCCGGCGCTGCGGCGCACCGGAGCCGCACTCCTCATGGCCATCGCGGTATCGGGCCCATGGTCCGC GGCGCACGCCGAGGGCTACCCGGCCAGGCCCGTGCAGCTCGTCGTCCCCTTCCCTCCCGGCGGGGCCGTGGACATCGTCG GCCGGCTGATCGGCAAGCCGCTGGGCGACGGCCTGGGCCAGCCGGTGGTGGTCGAGAACAAGGCCGGCGCCGGCACCATC GTGGGGGCGGCCTTCGTGGCCAATGCGCCGGCCGACGGCTACACGCTGCTGATCAGTTCGGGATCGACATTCACCGGCAA TCCTGCGCTCAACGCCAAACTGCCGTACGACCCCGTGCGGAGCTACGAACCCATCGGCATGGTGGCGCGGGTGCCGCTGG TGCTGCTGGCCCACCGCGACGTACCGGCCCGCAACCTGGCGGAGGTGATCGCCGCGGTGCAGCGCGCACCAGACAAGTTT TCCTACGGATCGTTCGGCAACGGCACCACGGGCCACTTCGCGGGCGAGCTGCTGTGGGCGGCCACCGGCATCCGGCCGGT GCACGTGCCCTACCGCGGCAGCGCGCCGGCCATGGCGGACCTGATGGGCGGGCAGATTCCCTTCACCATCGACACGGTAG CCGCCGCACTGCCGCAGTTGAAGGCGGGCAAGATCAAGGCCATCGCCGTCATGGGCGCCACGCGCGCCACCCAACTGCCC GATGTGCCCACCGTGGCGGAAAGCGGCTTTCCAGGGTTCGCCGCGGATTCCTGGCTCGCCGTCGTGGCGCCGCGCGGCCT GCCGGCCGATGCCAGGGCCCGGCTGCAAAAAGCCCTGGGCGAGGCGATGGCGGCGCCCGAAGTCCGCAGTAAGCTCATCG CCAGCGGGCTGGAGCCCGCCTACGAATCTGCCGATGCGGTGCTGTCGCGCATCGAGGATGAACTGCCGCGCATGCGCGCC ATCGCGCAGCGCGCGAACATCCGCCCTGAATGA
Upstream 100 bases:
>100_bases GTGCCGGCGCTCAACGCCTACAGCTTCCTGTTCCGCAACGGCTGAACGCCTGCCGCAGCCCGCGCCGTCCCACCGTTCCC CCACCGGAAGGAGCCCCGAA
Downstream 100 bases:
>100_bases ACCCTGGCCGGAGCACGGGCACTACACCTTCGCGGCAACGCTGTAGGCAAAATTCGCCTATCTCGCATTTTTCGTCTGGA AATAGCACCATTTCAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKPLGDGLGQPVVVENKAGAGTI VGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVRSYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKF SYGSFGNGTTGHFAGELLWAATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPAYESADAVLSRIEDELPRMRA IAQRANIRPE
Sequences:
>Translated_330_residues MTKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKPLGDGLGQPVVVENKAGAGTI VGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVRSYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKF SYGSFGNGTTGHFAGELLWAATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPAYESADAVLSRIEDELPRMRA IAQRANIRPE >Mature_329_residues TKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKPLGDGLGQPVVVENKAGAGTIV GAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVRSYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKFS YGSFGNGTTGHFAGELLWAATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLPD VPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPAYESADAVLSRIEDELPRMRAI AQRANIRPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34155; Mature: 34024
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKP CCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCH LGDGLGQPVVVENKAGAGTIVGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVR HHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCC SYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKFSYGSFGNGTTGHFAGELLWA CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH ATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP HCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPA CCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH YESADAVLSRIEDELPRMRAIAQRANIRPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TKYLPALRRTGAALLMAIAVSGPWSAAHAEGYPARPVQLVVPFPPGGAVDIVGRLIGKP CCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCH LGDGLGQPVVVENKAGAGTIVGAAFVANAPADGYTLLISSGSTFTGNPALNAKLPYDPVR HHCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCC SYEPIGMVARVPLVLLAHRDVPARNLAEVIAAVQRAPDKFSYGSFGNGTTGHFAGELLWA CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH ATGIRPVHVPYRGSAPAMADLMGGQIPFTIDTVAAALPQLKAGKIKAIAVMGATRATQLP HCCCEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC DVPTVAESGFPGFAADSWLAVVAPRGLPADARARLQKALGEAMAAPEVRSKLIASGLEPA CCCCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH YESADAVLSRIEDELPRMRAIAQRANIRPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]