| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613122
Identifier: 120613122
GI number: 120613122
Start: 4986751
End: 4987257
Strand: Reverse
Name: 120613122
Synonym: Aave_4489
Alternate gene names: NA
Gene position: 4987257-4986751 (Counterclockwise)
Preceding gene: 120613123
Following gene: 120613121
Centisome position: 93.17
GC content: 73.18
Gene sequence:
>507_bases ATGTCACGTTTTTCATACCGGCCCTTGCTACGTCAGTTCACAACTTCCCCACATGGGCGGGGGGCCGGGCGCTGGCTGGC GGGGCTGGCCCTCGCCAGCGCCGCCATCGCATTGGCGCCGCCAGCGCGGGCGCAGAGCGAGGCTTCCGCAGCGCTGTCGA TGCTGCCCGTGGCGTCCGTCGTGGGAACCGCGTCTGTCGGATCCGCGGCAGTCGGCGCGGTGGCCACCGTGCCCGTGGCG CTCTCCGTGGCCGGCGCGGTGCTCACGGTGCGCGCCGTGGAGGCATCTGCCGCCGGCACGGTCTATGTGCTGGAGCGCGC TTCCGACGGTGCCCGCGTGAGCGTGGAGGTGGCGGGCCGCGCCGCTTCGGGCATCGTGGCGGGCGTGGGCACCGTCGTCA CCTGCAGCGTCATCGGCACGGGCGTGGTGCTGTCGGCGGCGGGCGAGGTCCTGGCGTTCGTGCCCAATGCGCTGGGCGGG GCGCTGCTGCACAACGAGCGGTTGTGA
Upstream 100 bases:
>100_bases AGCGATGCAGGCGCCGGCCTCGGCTTCTCCCCTGCAGGAAGCTCCCGCTACCGAAGTGCGCCCTGACCGCGCCATGAACT GAACCCGGGAGACCACTGCC
Downstream 100 bases:
>100_bases GCGTGCCGGCCATGACCCATTCCCGCACCTCGCTGCGCCCTGCCGCCGTGGGCGCCGCCCGGCTGCTGCTGGCCGCTGCG CTGGCGATGGGGGCCACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSRFSYRPLLRQFTTSPHGRGAGRWLAGLALASAAIALAPPARAQSEASAALSMLPVASVVGTASVGSAAVGAVATVPVA LSVAGAVLTVRAVEASAAGTVYVLERASDGARVSVEVAGRAASGIVAGVGTVVTCSVIGTGVVLSAAGEVLAFVPNALGG ALLHNERL
Sequences:
>Translated_168_residues MSRFSYRPLLRQFTTSPHGRGAGRWLAGLALASAAIALAPPARAQSEASAALSMLPVASVVGTASVGSAAVGAVATVPVA LSVAGAVLTVRAVEASAAGTVYVLERASDGARVSVEVAGRAASGIVAGVGTVVTCSVIGTGVVLSAAGEVLAFVPNALGG ALLHNERL >Mature_167_residues SRFSYRPLLRQFTTSPHGRGAGRWLAGLALASAAIALAPPARAQSEASAALSMLPVASVVGTASVGSAAVGAVATVPVAL SVAGAVLTVRAVEASAAGTVYVLERASDGARVSVEVAGRAASGIVAGVGTVVTCSVIGTGVVLSAAGEVLAFVPNALGGA LLHNERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16329; Mature: 16198
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFSYRPLLRQFTTSPHGRGAGRWLAGLALASAAIALAPPARAQSEASAALSMLPVASV CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VGTASVGSAAVGAVATVPVALSVAGAVLTVRAVEASAAGTVYVLERASDGARVSVEVAGR HCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCCCEEEEEECCC AASGIVAGVGTVVTCSVIGTGVVLSAAGEVLAFVPNALGGALLHNERL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC >Mature Secondary Structure SRFSYRPLLRQFTTSPHGRGAGRWLAGLALASAAIALAPPARAQSEASAALSMLPVASV CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VGTASVGSAAVGAVATVPVALSVAGAVLTVRAVEASAAGTVYVLERASDGARVSVEVAGR HCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCCCEEEEEECCC AASGIVAGVGTVVTCSVIGTGVVLSAAGEVLAFVPNALGGALLHNERL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA