Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120613123

Identifier: 120613123

GI number: 120613123

Start: 4987276

End: 4987872

Strand: Reverse

Name: 120613123

Synonym: Aave_4490

Alternate gene names: NA

Gene position: 4987872-4987276 (Counterclockwise)

Preceding gene: 120613125

Following gene: 120613122

Centisome position: 93.18

GC content: 68.84

Gene sequence:

>597_bases
ATGCCGCCCATGTTCCACCACGGGCCGCAAGCCCCCGCTTCCATGCCGCGTCCTTCCGCTTCTTCTCCCTCGTCTTCCAC
TTCGCTGGTCCAGCGCGACACGGCCGCCTGGCAGCTGCAGGTCTGGGTGTCGTTCGGCATCGCCGCGTTCTGCTGCGCCG
TGGGCCTGGCCTGGCTGCCGGGCGAGCGGCTGGAGCAGATCTTCATGGTGATGGGCTATGTCTTCTGCCTCTCCGCGGTG
TTCATGCTCGCCAAGTTCGTGCGCGACAACCAGGCCGCCACGCCGCGCGGAGCGGGCGATACGCCGCTCTTCAAGCTGGT
GGTCTGGGGCGGCTTCGCCGTGGCGGTGGGACTGACCGGATGGGGCCTGTGGGGCATGGACATCTCTCCCACCTACAAGG
CCTTCCTGGGCGTGAGCTGGCTCTACCTGCTGACGACGGCGTTCACGCTGGCCAAGATGCTGCGCGACCGCCACGAGGCC
GACCTGGCCGAGGCGCGACTGCTGGGCCGCCGCGAAGCGATGCAGGCGCCGGCCTCGGCTTCTCCCCTGCAGGAAGCTCC
CGCTACCGAAGTGCGCCCTGACCGCGCCATGAACTGA

Upstream 100 bases:

>100_bases
TGGGCGTGGCCATTACCCGGTATCGCCTGGCGATACCAGCCGTCCGAGGCACCGCCACTGCACCGCTTCGTGAAGCCCGC
CTGCCGGCGCGGTGGCCATG

Downstream 100 bases:

>100_bases
ACCCGGGAGACCACTGCCATGTCACGTTTTTCATACCGGCCCTTGCTACGTCAGTTCACAACTTCCCCACATGGGCGGGG
GGCCGGGCGCTGGCTGGCGG

Product: YiaAB two helix domain-containing protein

Products: NA

Alternate protein names: YiaAB Two Helix Domain Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPPMFHHGPQAPASMPRPSASSPSSSTSLVQRDTAAWQLQVWVSFGIAAFCCAVGLAWLPGERLEQIFMVMGYVFCLSAV
FMLAKFVRDNQAATPRGAGDTPLFKLVVWGGFAVAVGLTGWGLWGMDISPTYKAFLGVSWLYLLTTAFTLAKMLRDRHEA
DLAEARLLGRREAMQAPASASPLQEAPATEVRPDRAMN

Sequences:

>Translated_198_residues
MPPMFHHGPQAPASMPRPSASSPSSSTSLVQRDTAAWQLQVWVSFGIAAFCCAVGLAWLPGERLEQIFMVMGYVFCLSAV
FMLAKFVRDNQAATPRGAGDTPLFKLVVWGGFAVAVGLTGWGLWGMDISPTYKAFLGVSWLYLLTTAFTLAKMLRDRHEA
DLAEARLLGRREAMQAPASASPLQEAPATEVRPDRAMN
>Mature_197_residues
PPMFHHGPQAPASMPRPSASSPSSSTSLVQRDTAAWQLQVWVSFGIAAFCCAVGLAWLPGERLEQIFMVMGYVFCLSAVF
MLAKFVRDNQAATPRGAGDTPLFKLVVWGGFAVAVGLTGWGLWGMDISPTYKAFLGVSWLYLLTTAFTLAKMLRDRHEAD
LAEARLLGRREAMQAPASASPLQEAPATEVRPDRAMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21520; Mature: 21389

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPMFHHGPQAPASMPRPSASSPSSSTSLVQRDTAAWQLQVWVSFGIAAFCCAVGLAWLP
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GERLEQIFMVMGYVFCLSAVFMLAKFVRDNQAATPRGAGDTPLFKLVVWGGFAVAVGLTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
WGLWGMDISPTYKAFLGVSWLYLLTTAFTLAKMLRDRHEADLAEARLLGRREAMQAPASA
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPLQEAPATEVRPDRAMN
CCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PPMFHHGPQAPASMPRPSASSPSSSTSLVQRDTAAWQLQVWVSFGIAAFCCAVGLAWLP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GERLEQIFMVMGYVFCLSAVFMLAKFVRDNQAATPRGAGDTPLFKLVVWGGFAVAVGLTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
WGLWGMDISPTYKAFLGVSWLYLLTTAFTLAKMLRDRHEADLAEARLLGRREAMQAPASA
CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SPLQEAPATEVRPDRAMN
CCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA