| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613100
Identifier: 120613100
GI number: 120613100
Start: 4962425
End: 4962748
Strand: Reverse
Name: 120613100
Synonym: Aave_4465
Alternate gene names: NA
Gene position: 4962748-4962425 (Counterclockwise)
Preceding gene: 120613101
Following gene: 120613099
Centisome position: 92.71
GC content: 66.05
Gene sequence:
>324_bases ATGGGTTTTTCCGCAAGCGATGTCGTACCGTTCACCCAGGCACGCTCCCGCCTGTCCGAGCTGGCCGACCAGGCCAAGGC GGGCGCCGAGAAGATCATCACCAAGAACGGCGAGAGCTACGTCGCACTGATCGACGCCGACCGGCTCGACTACTACCATC GCCTGGAGCGCGAGCACATCCACCTGCTGCTGATCGACGATGCCAGGCGCGGCTTGGCCGACATCGAGGCAGGACGCACC TGCGGCGCGGACACCGCCATCGCCCAGATCCAGCAACGCCGCGCCGCCTTGACTGCCGGCAAGGCCTCCAAAAAGCGTGG CTGA
Upstream 100 bases:
>100_bases GCTACACGGACAAGGACATGCCGGCGCGGTAGGCCCACTTTGCCGGGCCGCCGGGGTTAGACTGTACAGAATTCTGCTGA CTCCCTAGCCGAGGTGCACC
Downstream 100 bases:
>100_bases GGCGAGCTACCGGGTCGAGCTGACCGCCAGTTTTCTGGAGCGGCTGGACGCCCTGGAAGCATTCTTGACGGAGGCAGACG CTGCCTTTGCCTTCGACGAC
Product: prevent-host-death family protein
Products: NA
Alternate protein names: Prevent-Host-Death Family; Prevent-Host-Death Protein
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGFSASDVVPFTQARSRLSELADQAKAGAEKIITKNGESYVALIDADRLDYYHRLEREHIHLLLIDDARRGLADIEAGRT CGADTAIAQIQQRRAALTAGKASKKRG
Sequences:
>Translated_107_residues MGFSASDVVPFTQARSRLSELADQAKAGAEKIITKNGESYVALIDADRLDYYHRLEREHIHLLLIDDARRGLADIEAGRT CGADTAIAQIQQRRAALTAGKASKKRG >Mature_106_residues GFSASDVVPFTQARSRLSELADQAKAGAEKIITKNGESYVALIDADRLDYYHRLEREHIHLLLIDDARRGLADIEAGRTC GADTAIAQIQQRRAALTAGKASKKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11695; Mature: 11564
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSASDVVPFTQARSRLSELADQAKAGAEKIITKNGESYVALIDADRLDYYHRLEREHI CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCE HLLLIDDARRGLADIEAGRTCGADTAIAQIQQRRAALTAGKASKKRG EEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GFSASDVVPFTQARSRLSELADQAKAGAEKIITKNGESYVALIDADRLDYYHRLEREHI CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCE HLLLIDDARRGLADIEAGRTCGADTAIAQIQQRRAALTAGKASKKRG EEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA