| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yliJ [H]
Identifier: 120613074
GI number: 120613074
Start: 4933182
End: 4933802
Strand: Direct
Name: yliJ [H]
Synonym: Aave_4438
Alternate gene names: 120613074
Gene position: 4933182-4933802 (Clockwise)
Preceding gene: 120613073
Following gene: 120613075
Centisome position: 92.16
GC content: 71.82
Gene sequence:
>621_bases ATGCTGCGGCTCTGGGGACGGACGTCGTCCATCAACGTGCGCAAGGTCGTCTGGGCCGCGCAGGAGCTGTCGCTGGAGCT GCAGCGCACCGACGCGGGCGGCCAGTTCGGGCTCGTGCGCGAAGCGCAGTTCCTCTCGCTCAATCCCAACGGCCTGGTGC CGCTCATCGAGGACGAAAGCACCACGCTCTGGGAATCGAACACCATCGTGCGCTACCTCTGCGCGCGCCATGCGCCGGGC GACCTCTATCCGGAAGACCTGCCCACGCGTTTCCTCGCCGAGCAGTGGATGGACTGGCAGCAGACCACCCTCAACCCGGC CGGCCGCGATGCCTTCCTGCAGTGGATCCGCACGCCCGCGGCGCAGCGCGACCCGGAGGCGATCGCGCGCTCGGTGGCGG CGACCGAGCCGCTGATGGAGCTGCTCGACGCGCACCTGGCCCGGCATGCCTACCTGGCGGGCGACCGCTTCACCATGGCG GACATCCCCGTGGGCTGCGAGATCCACCGCTGGTGGGGCCTGCCGCAGGAGCGCCCCGCGCGGCCGCACCTGGAGCGCTG GTTCTCCGCGCTGCGCGCGCGCAGTGGCGCCCTGGGCGTGCTGGACCAGCCGCTCGCCTGA
Upstream 100 bases:
>100_bases TCCTTCGTCACCGCGAGCGCGCAGCAGATCCAGGACGGCATCGCCGCGCTGGCCGCCGCCATCCGCGCGCGCCTGCCCCA GTCCGTGGAGGCCTGACGCC
Downstream 100 bases:
>100_bases CGCTGCCCGCGGCGGCGGCAGTTTTTCCGATGCCACGGCGGCCAGAACGGCCGCCGGGAAGGGCCGCGCCCGCACGGTCC GGATGCTGCCCCGTCGTGCG
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLRLWGRTSSINVRKVVWAAQELSLELQRTDAGGQFGLVREAQFLSLNPNGLVPLIEDESTTLWESNTIVRYLCARHAPG DLYPEDLPTRFLAEQWMDWQQTTLNPAGRDAFLQWIRTPAAQRDPEAIARSVAATEPLMELLDAHLARHAYLAGDRFTMA DIPVGCEIHRWWGLPQERPARPHLERWFSALRARSGALGVLDQPLA
Sequences:
>Translated_206_residues MLRLWGRTSSINVRKVVWAAQELSLELQRTDAGGQFGLVREAQFLSLNPNGLVPLIEDESTTLWESNTIVRYLCARHAPG DLYPEDLPTRFLAEQWMDWQQTTLNPAGRDAFLQWIRTPAAQRDPEAIARSVAATEPLMELLDAHLARHAYLAGDRFTMA DIPVGCEIHRWWGLPQERPARPHLERWFSALRARSGALGVLDQPLA >Mature_206_residues MLRLWGRTSSINVRKVVWAAQELSLELQRTDAGGQFGLVREAQFLSLNPNGLVPLIEDESTTLWESNTIVRYLCARHAPG DLYPEDLPTRFLAEQWMDWQQTTLNPAGRDAFLQWIRTPAAQRDPEAIARSVAATEPLMELLDAHLARHAYLAGDRFTMA DIPVGCEIHRWWGLPQERPARPHLERWFSALRARSGALGVLDQPLA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=208, Percent_Identity=39.4230769230769, Blast_Score=145, Evalue=3e-36, Organism=Drosophila melanogaster, GI24654983, Length=190, Percent_Identity=30, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI17864594, Length=177, Percent_Identity=27.1186440677966, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17864598, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922526, Length=168, Percent_Identity=27.9761904761905, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI85725204, Length=191, Percent_Identity=27.2251308900524, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737923, Length=191, Percent_Identity=27.2251308900524, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24654965, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24654996, Length=196, Percent_Identity=28.0612244897959, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23359; Mature: 23359
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLWGRTSSINVRKVVWAAQELSLELQRTDAGGQFGLVREAQFLSLNPNGLVPLIEDES CEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCEEECCEEEEECCCCCEEEEECCC TTLWESNTIVRYLCARHAPGDLYPEDLPTRFLAEQWMDWQQTTLNPAGRDAFLQWIRTPA CEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCC AQRDPEAIARSVAATEPLMELLDAHLARHAYLAGDRFTMADIPVGCEIHRWWGLPQERPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHCCCCCCCCC RPHLERWFSALRARSGALGVLDQPLA CHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLRLWGRTSSINVRKVVWAAQELSLELQRTDAGGQFGLVREAQFLSLNPNGLVPLIEDES CEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCEEECCEEEEECCCCCEEEEECCC TTLWESNTIVRYLCARHAPGDLYPEDLPTRFLAEQWMDWQQTTLNPAGRDAFLQWIRTPA CEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCC AQRDPEAIARSVAATEPLMELLDAHLARHAYLAGDRFTMADIPVGCEIHRWWGLPQERPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEHHHCCCCCCCCC RPHLERWFSALRARSGALGVLDQPLA CHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]