Click here to switch to the map view.

The map label for this gene is 120613041

Identifier: 120613041

GI number: 120613041

Start: 4895622

End: 4897076

Strand: Direct

Name: 120613041

Synonym: Aave_4405

Alternate gene names: NA

Gene position: 4895622-4897076 (Clockwise)

Preceding gene: 120613040

Following gene: 120613042

Centisome position: 91.46

GC content: 63.64

Gene sequence:

>1455_bases
ATGCATACCGTCGTCATAGGAAACGGCATCGTCGCCCTCTCCACGGCTTTCAGGCTCATGCAACGGCTGGGGCCCCATGA
CCAGATCACCTTGATAGGTCCGCGGGCCCGGCCCGGCTCCGCTACCCAGGCGGCTGCGGCAATGCTCAATTCATTCGCGG
AAATCGAAGCGGGAGGTCTGGAACACCCCGTCGATCTCTTCCGCTTCGAGCTCAGCCATCTGGCCACCCGCATGTGGCCC
CGGTTCGAGCGCGAGATCATCGATCAGGCGGGAGGGTGCCTGCCCGCCGACTGCGGGCACTGTACCGGCTTTGGCGGAGG
CGGCTGCATCGATACGGGCACATTCGTCATCAATAATAATGCAGCAGACGATCTGGACGATGAAAATTTCGAGGCCATCG
CCACGGCCCTGGACGATTTCAGCGAACCCTACGAATACGTCTCGCCTCGCAGCATTCCCAATTACCGGCCACACCAGGGG
CAACGCGCCGTGCGAGCCCTATTCATACCGGGCGAAGGCTGGGTCAATCCGCGGCTGATGCTGGAAAAGCTCGACATGGT
GGTCGGGCGCCATCCGCGGGTGAGATTCCTGGAGGCCAGTGCACAACGTCTCCAGCACGGCCATGGATCCATCACCGGCG
TGGTCCTGAACAATGCGCAGGTGGTGGAGGCGGACAAGTTCGTGCTGGCGACAGGGGCATCTGCCTGGGACCTGCTGCAG
CGCAGCGACCTGGACATCGGCATGCAGCGGGTGTTCTATGGCGTCGGCGTATCTCTGGAAATCGAGAGCCCCGACAATCC
CCATACCCACTGCATTCGCACACCGAACCGAGGGCTGGCGTGCGGCGTCTACAGCGCACCCTACTTCACAGGCCCCCGTC
GGCCGACCGACCACATTCTCATAGGGGCCAGCAGTTTCACATCGGCGACCCCCGTGGAGCACGCCCGCATCGGCAGCGTG
GAGTCCCTGTTGAAATCCGCCATGGAGCAGATCAACCGCGATTTCTACCGGGCCTCCCTGGTCCGTGTGAACGTGGGCTG
GCGGCCCAGCAGCCAGGACGGATATCCCATGGTAGGGCCGACGGCGCTTCACAATCTCATCGTCGCCACGGGGACCAAGC
GCGACGGCTTCCACATGGCACCGGTCCTCTCCCAGTATCTGGCGGGACTCGTTCATGGCGATCCCCTCCCCGACGAGCGC
TGGAACTGGCTGGCCCCCGATCGCGCGCCGCTGCGGTTGCTGACACGCGAGCAGGCGATCGCCAAAGCGGTGCGGCACCA
GATCAGCGCGGCCTATCAACATGGTTTCGTGCCTGCGAAGAGCCGCATGCCGGACCAACTGGCCGACACCTACCGCAGCC
AGCTGGAACAATTGCATGACCAGGTGGGCGCCATCGACTGGGGGATTCCGCCCGATATGCTCGACATGTACCGGTACGGC
CACGCAAAGGCCTGA

Upstream 100 bases:

>100_bases
AACCAGCATCGACACACATTGCATCGTGCGCCCACGTATCCCAGCCTTTGCTATGCCCGCAAGATGTGAGCGTGCTTTTC
CATTTTCGTAGAGCAGCCAT

Downstream 100 bases:

>100_bases
ACCGGGTCCCCGCCCCTCACGGAAGAGCCCAGCCATGGACAACTCCAGCATCCCTTTCGGCCAGCCGTTCATCGTCGGCA
AGGAGCTTTTCTACATCGCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Formimidoyl Fortimicin A Synthetase; LOW QUALITY PROTEIN Formimidoyl Fortimicin A Synthetase; Oxidoreductase; Fortimicin A N-Forimidoyltransferase; Glycine/D-Amino Acid Oxidase

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MHTVVIGNGIVALSTAFRLMQRLGPHDQITLIGPRARPGSATQAAAAMLNSFAEIEAGGLEHPVDLFRFELSHLATRMWP
RFEREIIDQAGGCLPADCGHCTGFGGGGCIDTGTFVINNNAADDLDDENFEAIATALDDFSEPYEYVSPRSIPNYRPHQG
QRAVRALFIPGEGWVNPRLMLEKLDMVVGRHPRVRFLEASAQRLQHGHGSITGVVLNNAQVVEADKFVLATGASAWDLLQ
RSDLDIGMQRVFYGVGVSLEIESPDNPHTHCIRTPNRGLACGVYSAPYFTGPRRPTDHILIGASSFTSATPVEHARIGSV
ESLLKSAMEQINRDFYRASLVRVNVGWRPSSQDGYPMVGPTALHNLIVATGTKRDGFHMAPVLSQYLAGLVHGDPLPDER
WNWLAPDRAPLRLLTREQAIAKAVRHQISAAYQHGFVPAKSRMPDQLADTYRSQLEQLHDQVGAIDWGIPPDMLDMYRYG
HAKA

Sequences:

>Translated_484_residues
MHTVVIGNGIVALSTAFRLMQRLGPHDQITLIGPRARPGSATQAAAAMLNSFAEIEAGGLEHPVDLFRFELSHLATRMWP
RFEREIIDQAGGCLPADCGHCTGFGGGGCIDTGTFVINNNAADDLDDENFEAIATALDDFSEPYEYVSPRSIPNYRPHQG
QRAVRALFIPGEGWVNPRLMLEKLDMVVGRHPRVRFLEASAQRLQHGHGSITGVVLNNAQVVEADKFVLATGASAWDLLQ
RSDLDIGMQRVFYGVGVSLEIESPDNPHTHCIRTPNRGLACGVYSAPYFTGPRRPTDHILIGASSFTSATPVEHARIGSV
ESLLKSAMEQINRDFYRASLVRVNVGWRPSSQDGYPMVGPTALHNLIVATGTKRDGFHMAPVLSQYLAGLVHGDPLPDER
WNWLAPDRAPLRLLTREQAIAKAVRHQISAAYQHGFVPAKSRMPDQLADTYRSQLEQLHDQVGAIDWGIPPDMLDMYRYG
HAKA
>Mature_484_residues
MHTVVIGNGIVALSTAFRLMQRLGPHDQITLIGPRARPGSATQAAAAMLNSFAEIEAGGLEHPVDLFRFELSHLATRMWP
RFEREIIDQAGGCLPADCGHCTGFGGGGCIDTGTFVINNNAADDLDDENFEAIATALDDFSEPYEYVSPRSIPNYRPHQG
QRAVRALFIPGEGWVNPRLMLEKLDMVVGRHPRVRFLEASAQRLQHGHGSITGVVLNNAQVVEADKFVLATGASAWDLLQ
RSDLDIGMQRVFYGVGVSLEIESPDNPHTHCIRTPNRGLACGVYSAPYFTGPRRPTDHILIGASSFTSATPVEHARIGSV
ESLLKSAMEQINRDFYRASLVRVNVGWRPSSQDGYPMVGPTALHNLIVATGTKRDGFHMAPVLSQYLAGLVHGDPLPDER
WNWLAPDRAPLRLLTREQAIAKAVRHQISAAYQHGFVPAKSRMPDQLADTYRSQLEQLHDQVGAIDWGIPPDMLDMYRYG
HAKA

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53203; Mature: 53203

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTVVIGNGIVALSTAFRLMQRLGPHDQITLIGPRARPGSATQAAAAMLNSFAEIEAGGL
CCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
EHPVDLFRFELSHLATRMWPRFEREIIDQAGGCLPADCGHCTGFGGGGCIDTGTFVINNN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
AADDLDDENFEAIATALDDFSEPYEYVSPRSIPNYRPHQGQRAVRALFIPGEGWVNPRLM
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHH
LEKLDMVVGRHPRVRFLEASAQRLQHGHGSITGVVLNNAQVVEADKFVLATGASAWDLLQ
HHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCEEEECCCEEEEECCHHHHHHH
RSDLDIGMQRVFYGVGVSLEIESPDNPHTHCIRTPNRGLACGVYSAPYFTGPRRPTDHIL
HCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEE
IGASSFTSATPVEHARIGSVESLLKSAMEQINRDFYRASLVRVNVGWRPSSQDGYPMVGP
EECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCH
TALHNLIVATGTKRDGFHMAPVLSQYLAGLVHGDPLPDERWNWLAPDRAPLRLLTREQAI
HHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AKAVRHQISAAYQHGFVPAKSRMPDQLADTYRSQLEQLHDQVGAIDWGIPPDMLDMYRYG
HHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
HAKA
CCCC
>Mature Secondary Structure
MHTVVIGNGIVALSTAFRLMQRLGPHDQITLIGPRARPGSATQAAAAMLNSFAEIEAGGL
CCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
EHPVDLFRFELSHLATRMWPRFEREIIDQAGGCLPADCGHCTGFGGGGCIDTGTFVINNN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
AADDLDDENFEAIATALDDFSEPYEYVSPRSIPNYRPHQGQRAVRALFIPGEGWVNPRLM
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHH
LEKLDMVVGRHPRVRFLEASAQRLQHGHGSITGVVLNNAQVVEADKFVLATGASAWDLLQ
HHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEEEEECCCEEEECCCEEEEECCHHHHHHH
RSDLDIGMQRVFYGVGVSLEIESPDNPHTHCIRTPNRGLACGVYSAPYFTGPRRPTDHIL
HCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCEEE
IGASSFTSATPVEHARIGSVESLLKSAMEQINRDFYRASLVRVNVGWRPSSQDGYPMVGP
EECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCH
TALHNLIVATGTKRDGFHMAPVLSQYLAGLVHGDPLPDERWNWLAPDRAPLRLLTREQAI
HHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AKAVRHQISAAYQHGFVPAKSRMPDQLADTYRSQLEQLHDQVGAIDWGIPPDMLDMYRYG
HHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
HAKA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA