| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613040
Identifier: 120613040
GI number: 120613040
Start: 4894769
End: 4895590
Strand: Direct
Name: 120613040
Synonym: Aave_4404
Alternate gene names: NA
Gene position: 4894769-4895590 (Clockwise)
Preceding gene: 120613039
Following gene: 120613041
Centisome position: 91.44
GC content: 60.22
Gene sequence:
>822_bases ATGCCGCCGCCAACCGATACACACAGCATGAACACCGCTCCATCCCCTGAAAAAAACCAGAAGCACGAGTCTTCGGTACT GACGCACTCCGCGATCGACGGCATTCAGGCCCGGGATGAACTCTTCGCCCTGATGAATGGCTACGCGAGCACACCCGAGG AAAAAGAACGGTCGCTAGGGCTGTTCCTTCGGGGCTCCCTTCTGGCCCGCATTCTTGCGGTGGCGCACATCTATCAGCAA ATCGTGGATATTCCCGGCATCATTTTCGATATCGGCACCTGGCGCGGGCAGACCGCGGTGCTGTGCGAAAACTTTCGTGC CATCTACGAGCCATTGCACTTCAATCGCCGGATCGTCTGTTTCGATACTTTCGAGGGGTACGCCGGTTTTGGCGACCAAG ACCGCGCGACTGCGCTGCACCAGGAGGGCACTTACTCGGTGGGTGGAACCGCCTATGCCGACTACCTGGCTCACCTGCTA CAGGTCCATGAGCGCGCCAATGCCATGGGGCACAACAACGGCAAGCACCAGGTCATCGCCGGAGACTGCCGGGAAACCAT TCCCGCATTTTTCGGAGACCATCCCAACGAGATCCTGAGTCTGGCGTTTTTCGACGTCAATGCGCTCGCACCCACACGCG AGGCGCTGGACCAAGTCTGGAAGCGGCTGGCCCCCGGGGGCATCGTGGCGTTCTGGCAATTGACCCGGGCAGGCATGCGC GCCGAAGGGCAGGCCTATGCCGCGGACCTCCTCAACCAGCATCGACACACATTGCATCGTGCGCCCACGTATCCCAGCCT TTGCTATGCCCGCAAGATGTGA
Upstream 100 bases:
>100_bases TCTTTCGTCACTGCAAAACCCGATTCTCACGCCATGTCGCACTGCTGCACGACTATGGGCTCTACGAATTCACCATCCTG GTACGCAAGCAGGTCGGGTG
Downstream 100 bases:
>100_bases GCGTGCTTTTCCATTTTCGTAGAGCAGCCATATGCATACCGTCGTCATAGGAAACGGCATCGTCGCCCTCTCCACGGCTT TCAGGCTCATGCAACGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NDP-Hexose 3-O-Methyltransferase
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPPPTDTHSMNTAPSPEKNQKHESSVLTHSAIDGIQARDELFALMNGYASTPEEKERSLGLFLRGSLLARILAVAHIYQQ IVDIPGIIFDIGTWRGQTAVLCENFRAIYEPLHFNRRIVCFDTFEGYAGFGDQDRATALHQEGTYSVGGTAYADYLAHLL QVHERANAMGHNNGKHQVIAGDCRETIPAFFGDHPNEILSLAFFDVNALAPTREALDQVWKRLAPGGIVAFWQLTRAGMR AEGQAYAADLLNQHRHTLHRAPTYPSLCYARKM
Sequences:
>Translated_273_residues MPPPTDTHSMNTAPSPEKNQKHESSVLTHSAIDGIQARDELFALMNGYASTPEEKERSLGLFLRGSLLARILAVAHIYQQ IVDIPGIIFDIGTWRGQTAVLCENFRAIYEPLHFNRRIVCFDTFEGYAGFGDQDRATALHQEGTYSVGGTAYADYLAHLL QVHERANAMGHNNGKHQVIAGDCRETIPAFFGDHPNEILSLAFFDVNALAPTREALDQVWKRLAPGGIVAFWQLTRAGMR AEGQAYAADLLNQHRHTLHRAPTYPSLCYARKM >Mature_272_residues PPPTDTHSMNTAPSPEKNQKHESSVLTHSAIDGIQARDELFALMNGYASTPEEKERSLGLFLRGSLLARILAVAHIYQQI VDIPGIIFDIGTWRGQTAVLCENFRAIYEPLHFNRRIVCFDTFEGYAGFGDQDRATALHQEGTYSVGGTAYADYLAHLLQ VHERANAMGHNNGKHQVIAGDCRETIPAFFGDHPNEILSLAFFDVNALAPTREALDQVWKRLAPGGIVAFWQLTRAGMRA EGQAYAADLLNQHRHTLHRAPTYPSLCYARKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30387; Mature: 30255
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPTDTHSMNTAPSPEKNQKHESSVLTHSAIDGIQARDELFALMNGYASTPEEKERSLG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LFLRGSLLARILAVAHIYQQIVDIPGIIFDIGTWRGQTAVLCENFRAIYEPLHFNRRIVC HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEE FDTFEGYAGFGDQDRATALHQEGTYSVGGTAYADYLAHLLQVHERANAMGHNNGKHQVIA EECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GDCRETIPAFFGDHPNEILSLAFFDVNALAPTREALDQVWKRLAPGGIVAFWQLTRAGMR CCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC AEGQAYAADLLNQHRHTLHRAPTYPSLCYARKM CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure PPPTDTHSMNTAPSPEKNQKHESSVLTHSAIDGIQARDELFALMNGYASTPEEKERSLG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LFLRGSLLARILAVAHIYQQIVDIPGIIFDIGTWRGQTAVLCENFRAIYEPLHFNRRIVC HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEE FDTFEGYAGFGDQDRATALHQEGTYSVGGTAYADYLAHLLQVHERANAMGHNNGKHQVIA EECCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GDCRETIPAFFGDHPNEILSLAFFDVNALAPTREALDQVWKRLAPGGIVAFWQLTRAGMR CCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC AEGQAYAADLLNQHRHTLHRAPTYPSLCYARKM CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA