| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613039
Identifier: 120613039
GI number: 120613039
Start: 4894113
End: 4894769
Strand: Direct
Name: 120613039
Synonym: Aave_4403
Alternate gene names: NA
Gene position: 4894113-4894769 (Clockwise)
Preceding gene: 120613038
Following gene: 120613040
Centisome position: 91.43
GC content: 60.58
Gene sequence:
>657_bases GTGTCTCGTGACGAAAACGCTTTGCACGAAGGGATCGCGCTCTACTATGAGCGTCGACTGCATGAGCACGGGCCGACCCC CCGAGGTGTGGACTGGAACGGAGCGGAATCCCAGCAGCTTCGCTTCGCCCAGCTGACGCAGATACTGCAAGCCGGCCCCG GTCCGGACAGTGACCGTCCGACGACCCTGAACGATCTGGGCTGCGGTTATGGAGCCCTGCTCGACTTCCTTGTGGAGACA GGCTGGAACATCGACTACGAGGGTATCGACCTGTCCGCCTCGATGGTGCAGGCAGCCCAGGCACGCCACGCAGGCGTCGC GAACGCCCGCTTCCGGGTCGGTGCAGCCTGTACCCGCATGGCCGACTACAGCGTGGCCAGCGGACTGTTCAATGTCCGTC AGGAGGTGCCTGTTCCGTTGTGGGAGAAATTCATCCATGACACGCTGGACGATCTGGACCGCAGCAGCCGCCGTGGATTT GCGTTCAATTGCCTCACCTCATACTCGGACGCAGAGAAGATGAAGCCCCATCTGCACTATTGCGTACCCGAAGAGATCTT TCGTCACTGCAAAACCCGATTCTCACGCCATGTCGCACTGCTGCACGACTATGGGCTCTACGAATTCACCATCCTGGTAC GCAAGCAGGTCGGGTGA
Upstream 100 bases:
>100_bases CAGCCCCACGGTCCCTTCACCCATTTCGTGAGCATCGTCGACCTATTGATGAGCACGGGAGAGAAAGCGGCCAGCTATCT CATCCAGCAGGAATCTTCGC
Downstream 100 bases:
>100_bases TGCCGCCGCCAACCGATACACACAGCATGAACACCGCTCCATCCCCTGAAAAAAACCAGAAGCACGAGTCTTCGGTACTG ACGCACTCCGCGATCGACGG
Product: SAM-binding motif-containing protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain Protein; S-Adenosyl-L-Methionine-Dependent Methyltransferase
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSRDENALHEGIALYYERRLHEHGPTPRGVDWNGAESQQLRFAQLTQILQAGPGPDSDRPTTLNDLGCGYGALLDFLVET GWNIDYEGIDLSASMVQAAQARHAGVANARFRVGAACTRMADYSVASGLFNVRQEVPVPLWEKFIHDTLDDLDRSSRRGF AFNCLTSYSDAEKMKPHLHYCVPEEIFRHCKTRFSRHVALLHDYGLYEFTILVRKQVG
Sequences:
>Translated_218_residues MSRDENALHEGIALYYERRLHEHGPTPRGVDWNGAESQQLRFAQLTQILQAGPGPDSDRPTTLNDLGCGYGALLDFLVET GWNIDYEGIDLSASMVQAAQARHAGVANARFRVGAACTRMADYSVASGLFNVRQEVPVPLWEKFIHDTLDDLDRSSRRGF AFNCLTSYSDAEKMKPHLHYCVPEEIFRHCKTRFSRHVALLHDYGLYEFTILVRKQVG >Mature_217_residues SRDENALHEGIALYYERRLHEHGPTPRGVDWNGAESQQLRFAQLTQILQAGPGPDSDRPTTLNDLGCGYGALLDFLVETG WNIDYEGIDLSASMVQAAQARHAGVANARFRVGAACTRMADYSVASGLFNVRQEVPVPLWEKFIHDTLDDLDRSSRRGFA FNCLTSYSDAEKMKPHLHYCVPEEIFRHCKTRFSRHVALLHDYGLYEFTILVRKQVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24630; Mature: 24499
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDENALHEGIALYYERRLHEHGPTPRGVDWNGAESQQLRFAQLTQILQAGPGPDSDRP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC TTLNDLGCGYGALLDFLVETGWNIDYEGIDLSASMVQAAQARHAGVANARFRVGAACTRM CCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ADYSVASGLFNVRQEVPVPLWEKFIHDTLDDLDRSSRRGFAFNCLTSYSDAEKMKPHLHY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCHHHCCCHHHC CVPEEIFRHCKTRFSRHVALLHDYGLYEFTILVRKQVG CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure SRDENALHEGIALYYERRLHEHGPTPRGVDWNGAESQQLRFAQLTQILQAGPGPDSDRP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC TTLNDLGCGYGALLDFLVETGWNIDYEGIDLSASMVQAAQARHAGVANARFRVGAACTRM CCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ADYSVASGLFNVRQEVPVPLWEKFIHDTLDDLDRSSRRGFAFNCLTSYSDAEKMKPHLHY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCHHHCCCHHHC CVPEEIFRHCKTRFSRHVALLHDYGLYEFTILVRKQVG CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA