The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612995

Identifier: 120612995

GI number: 120612995

Start: 4843343

End: 4845706

Strand: Direct

Name: 120612995

Synonym: Aave_4359

Alternate gene names: NA

Gene position: 4843343-4845706 (Clockwise)

Preceding gene: 120612992

Following gene: 120612999

Centisome position: 90.48

GC content: 58.5

Gene sequence:

>2364_bases
ATGGATAACTTTTTCAACTTCGATATCAACGGTTATCGCCGAATGACGGCAGCAGTGGATGCTTCTCATGGTTCGCCGCC
CTCCCCAAGGGATGGAGGAAGCCGCACGCAGAGCTTCGATATGCACCCGTTGCGCGAGGCTCTTCCCTCGCTGGAAACCG
TGCACGGTCCTGTCCGGACCATGGTGCATTGCGCGCGTAAACCTAAACCAGTGCCCAAGTCAGTCGTGGAACTGGTGAAA
ATTCTCCCGAGATTTGGTAAGGGAGAAGCCTGGGAATCGCTGTGCCGAGATTTCCCCGGTATACAAGTTTATTTTTCAGA
TTATGGAATCAATGAGCGTGGCTTCGGTTTCCTGCTGAATCACCTGGACAGCGAACAAATTGACAATGTGGTGGAGCAGA
CAGAAAACCGGATCAACATTATCTGTTCCGACGATTTCAAAATTATCGCATTGAAAACCGCGGCGACGACAATCGAAACA
TGCCGCGCCAAATTCCAGGAACACGCCAAATTCCAGGAACTCTCCAGCTCAACTCTCTCGAATAAATCAGAAGGCAAATA
CTACAGAAACCTCATCGATAATTTTATGGATATCCTGGACAGGTTTGAAGCAGGAGAGAGCATACCCTCATTGGCCGAAA
CCGTGCCAGGCATCACCGGCTTCATTGGGAACCAGGGCTTCTCGAAAAAGGCCAAATATTTCCTGGAACACATCAAACCC
GAGGAAAAGGAGCGGATAGAACTTGCAGTCAAGCGCAGAAACAAAAACGTGAGCGCACCGAAGCCCTCCGGCGTACCGTC
CCCGTTCAGCGGGACGCTCCGCTATATCCATGAAAACCCCGACTATCTGATAAATACCTCGAAGGCATTCAGTAATCCAT
CGAATTCCATTGCAGACAAGGTATGCGATAAAAACCTCAGCATCCACCTCCTGAAAAAAATAGTCAACATAGAAACCGGC
GAACTGACTGCTACCGGAGAGAAGCTCATTTCGAACGCCGATCCCCAGACCCGGCGTCTGATTCGCGCCAACTTCAAGCT
CCGTTTCCGGGTGCCCTCCACGCCCGCGGCCGAAACCGCCTCCCCTGCCCATCAGGAGCCCTCTCACGGGCAGCACTATG
CTGCGCCCAATGATTCGTTCTTTTCCGGATTCTCGGGAGAAGTGCGCCGCTACCACGAACCCTCGACGCCCCAGTACCCG
CCCGCTGCCCCGGCCTTCAGCGAAGCCGGCCCCTACCACGCCCCCTATTACTACGGACAGCCCTATGCTCCACCCGGTGA
TTCGTTCTTTTCCGGATTCTCGGGAGAAGTGCGCCGCCACTACGAGCCCCCGACGCCCCAGTACCCTCCCGCCACCCCCG
CATCCAGCGAGGCTTCCCTCTATTACGACCCCTACTACAACCCCTATCACGGACAGCAATACGCTCCACCCGGCGATTCG
TTCTTTTCTGGATTCTCGGCAGAAGTGCGGCGCCACCACGAACCCTCGACGCCACAGTATCCGCAGAACTCCACCTCCAC
ATTCGGCGATCTTTCATCCCTGAACGAAGGCGCGTATTCGACCCGCGATTTCGATCTCAATACGCCGGCGGAAGTCACGC
AGCCATGGCGGGGCGATGGTTATGACGACGTCGAGTCGGCGGCCAGCCCCGAACGGATCGACGTGGACGCCCTGCCTTCT
CCGCAGAACTCCTCCGCACCGGCAGGCCAGGAATTGGCCCTGGCCGAAGAGGAGTGGCTGGGCGATGAGCACCTGATCAC
CTATGTCGGTACCATCGCGGACCGATTGCGGGGCCAGCCCGGCGCGGACTTGCTCAATTTCGCCGACCCGCTGCTGGTGA
CCCAGCTGATCCAGGGGGAAAGCGAGCAACGGAACAACGCCATGTACCACATCATCGGCCGGGGCGGGCCCATCGTCTTC
CTGCCCGTGAATGCGCCGGACTCCCACTGGTCGCTGCTCGTCATCGACCAGCGTACCGGCAATGCATTCCACTACGACTC
CCTGGTCTCTCCCGGGGACGCCAGGAACGCGGTCCACACACGCCAGTACCAGCTGGCCAGCAGGGCTGCGCGGGCCATGG
GTATCACCGGGCCTGTCCAGGGCATGCCCATCGCCCGCCAGCGCGACGGCCATTCCTGCGGCGACCATGTGCTCCAGGCC
ACCGAACAGCTGGCCCAGAGCGTGATCGCCGGCACGTTCGGCCAGCCGGGCACCATGGACCTGAGCGATCTGCAGACGGA
CCGCGGCCTCATTGCCGACACGATCGCCAACGCCACCGCAGACCGTAATGCGGAGCCGCCCCCCGCCACGTCCCGAACGC
ACGAAAGGCCAGCGAAGAAAAACAAGAAATGGTGGAAGTTCTAG

Upstream 100 bases:

>100_bases
CACCGGAAATCACGAAATATCCGTCGGCGTGCACCGCAACCACCTGGATTTACAGGAATTTCACGGTGCCCCGCGAAACC
CGTGATCCACATAAAAAAAA

Downstream 100 bases:

>100_bases
CAACCGTTAAGCCGGCGCCTTGCCCAGGAAATCCGGCAACTCGGCCATCGAACCGATGACCGTGAAGGCCCCTGCCGCCC
GCAAGGCTTCGGCGGCGTCG

Product: peptidase C48, SUMO/Sentrin/Ubl1

Products: NA

Alternate protein names: Outer Protein D; Virulence Protein

Number of amino acids: Translated: 787; Mature: 787

Protein sequence:

>787_residues
MDNFFNFDINGYRRMTAAVDASHGSPPSPRDGGSRTQSFDMHPLREALPSLETVHGPVRTMVHCARKPKPVPKSVVELVK
ILPRFGKGEAWESLCRDFPGIQVYFSDYGINERGFGFLLNHLDSEQIDNVVEQTENRINIICSDDFKIIALKTAATTIET
CRAKFQEHAKFQELSSSTLSNKSEGKYYRNLIDNFMDILDRFEAGESIPSLAETVPGITGFIGNQGFSKKAKYFLEHIKP
EEKERIELAVKRRNKNVSAPKPSGVPSPFSGTLRYIHENPDYLINTSKAFSNPSNSIADKVCDKNLSIHLLKKIVNIETG
ELTATGEKLISNADPQTRRLIRANFKLRFRVPSTPAAETASPAHQEPSHGQHYAAPNDSFFSGFSGEVRRYHEPSTPQYP
PAAPAFSEAGPYHAPYYYGQPYAPPGDSFFSGFSGEVRRHYEPPTPQYPPATPASSEASLYYDPYYNPYHGQQYAPPGDS
FFSGFSAEVRRHHEPSTPQYPQNSTSTFGDLSSLNEGAYSTRDFDLNTPAEVTQPWRGDGYDDVESAASPERIDVDALPS
PQNSSAPAGQELALAEEEWLGDEHLITYVGTIADRLRGQPGADLLNFADPLLVTQLIQGESEQRNNAMYHIIGRGGPIVF
LPVNAPDSHWSLLVIDQRTGNAFHYDSLVSPGDARNAVHTRQYQLASRAARAMGITGPVQGMPIARQRDGHSCGDHVLQA
TEQLAQSVIAGTFGQPGTMDLSDLQTDRGLIADTIANATADRNAEPPPATSRTHERPAKKNKKWWKF

Sequences:

>Translated_787_residues
MDNFFNFDINGYRRMTAAVDASHGSPPSPRDGGSRTQSFDMHPLREALPSLETVHGPVRTMVHCARKPKPVPKSVVELVK
ILPRFGKGEAWESLCRDFPGIQVYFSDYGINERGFGFLLNHLDSEQIDNVVEQTENRINIICSDDFKIIALKTAATTIET
CRAKFQEHAKFQELSSSTLSNKSEGKYYRNLIDNFMDILDRFEAGESIPSLAETVPGITGFIGNQGFSKKAKYFLEHIKP
EEKERIELAVKRRNKNVSAPKPSGVPSPFSGTLRYIHENPDYLINTSKAFSNPSNSIADKVCDKNLSIHLLKKIVNIETG
ELTATGEKLISNADPQTRRLIRANFKLRFRVPSTPAAETASPAHQEPSHGQHYAAPNDSFFSGFSGEVRRYHEPSTPQYP
PAAPAFSEAGPYHAPYYYGQPYAPPGDSFFSGFSGEVRRHYEPPTPQYPPATPASSEASLYYDPYYNPYHGQQYAPPGDS
FFSGFSAEVRRHHEPSTPQYPQNSTSTFGDLSSLNEGAYSTRDFDLNTPAEVTQPWRGDGYDDVESAASPERIDVDALPS
PQNSSAPAGQELALAEEEWLGDEHLITYVGTIADRLRGQPGADLLNFADPLLVTQLIQGESEQRNNAMYHIIGRGGPIVF
LPVNAPDSHWSLLVIDQRTGNAFHYDSLVSPGDARNAVHTRQYQLASRAARAMGITGPVQGMPIARQRDGHSCGDHVLQA
TEQLAQSVIAGTFGQPGTMDLSDLQTDRGLIADTIANATADRNAEPPPATSRTHERPAKKNKKWWKF
>Mature_787_residues
MDNFFNFDINGYRRMTAAVDASHGSPPSPRDGGSRTQSFDMHPLREALPSLETVHGPVRTMVHCARKPKPVPKSVVELVK
ILPRFGKGEAWESLCRDFPGIQVYFSDYGINERGFGFLLNHLDSEQIDNVVEQTENRINIICSDDFKIIALKTAATTIET
CRAKFQEHAKFQELSSSTLSNKSEGKYYRNLIDNFMDILDRFEAGESIPSLAETVPGITGFIGNQGFSKKAKYFLEHIKP
EEKERIELAVKRRNKNVSAPKPSGVPSPFSGTLRYIHENPDYLINTSKAFSNPSNSIADKVCDKNLSIHLLKKIVNIETG
ELTATGEKLISNADPQTRRLIRANFKLRFRVPSTPAAETASPAHQEPSHGQHYAAPNDSFFSGFSGEVRRYHEPSTPQYP
PAAPAFSEAGPYHAPYYYGQPYAPPGDSFFSGFSGEVRRHYEPPTPQYPPATPASSEASLYYDPYYNPYHGQQYAPPGDS
FFSGFSAEVRRHHEPSTPQYPQNSTSTFGDLSSLNEGAYSTRDFDLNTPAEVTQPWRGDGYDDVESAASPERIDVDALPS
PQNSSAPAGQELALAEEEWLGDEHLITYVGTIADRLRGQPGADLLNFADPLLVTQLIQGESEQRNNAMYHIIGRGGPIVF
LPVNAPDSHWSLLVIDQRTGNAFHYDSLVSPGDARNAVHTRQYQLASRAARAMGITGPVQGMPIARQRDGHSCGDHVLQA
TEQLAQSVIAGTFGQPGTMDLSDLQTDRGLIADTIANATADRNAEPPPATSRTHERPAKKNKKWWKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87061; Mature: 87061

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50600 ULP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNFFNFDINGYRRMTAAVDASHGSPPSPRDGGSRTQSFDMHPLREALPSLETVHGPVRT
CCCEEECCCCCCEEEEHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MVHCARKPKPVPKSVVELVKILPRFGKGEAWESLCRDFPGIQVYFSDYGINERGFGFLLN
HHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
HLDSEQIDNVVEQTENRINIICSDDFKIIALKTAATTIETCRAKFQEHAKFQELSSSTLS
HCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NKSEGKYYRNLIDNFMDILDRFEAGESIPSLAETVPGITGFIGNQGFSKKAKYFLEHIKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCC
EEKERIELAVKRRNKNVSAPKPSGVPSPFSGTLRYIHENPDYLINTSKAFSNPSNSIADK
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECHHHHCCCCHHHHHH
VCDKNLSIHLLKKIVNIETGELTATGEKLISNADPQTRRLIRANFKLRFRVPSTPAAETA
HHCCCCHHHHHHHHHCCCCCCEEECHHHHHCCCCHHHHHHHEECCEEEEECCCCCCCCCC
SPAHQEPSHGQHYAAPNDSFFSGFSGEVRRYHEPSTPQYPPAAPAFSEAGPYHAPYYYGQ
CCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PYAPPGDSFFSGFSGEVRRHYEPPTPQYPPATPASSEASLYYDPYYNPYHGQQYAPPGDS
CCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
FFSGFSAEVRRHHEPSTPQYPQNSTSTFGDLSSLNEGAYSTRDFDLNTPAEVTQPWRGDG
HHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCC
YDDVESAASPERIDVDALPSPQNSSAPAGQELALAEEEWLGDEHLITYVGTIADRLRGQP
CHHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCC
GADLLNFADPLLVTQLIQGESEQRNNAMYHIIGRGGPIVFLPVNAPDSHWSLLVIDQRTG
CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCC
NAFHYDSLVSPGDARNAVHTRQYQLASRAARAMGITGPVQGMPIARQRDGHSCGDHVLQA
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
TEQLAQSVIAGTFGQPGTMDLSDLQTDRGLIADTIANATADRNAEPPPATSRTHERPAKK
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
NKKWWKF
CCCCCCC
>Mature Secondary Structure
MDNFFNFDINGYRRMTAAVDASHGSPPSPRDGGSRTQSFDMHPLREALPSLETVHGPVRT
CCCEEECCCCCCEEEEHEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
MVHCARKPKPVPKSVVELVKILPRFGKGEAWESLCRDFPGIQVYFSDYGINERGFGFLLN
HHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
HLDSEQIDNVVEQTENRINIICSDDFKIIALKTAATTIETCRAKFQEHAKFQELSSSTLS
HCCHHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NKSEGKYYRNLIDNFMDILDRFEAGESIPSLAETVPGITGFIGNQGFSKKAKYFLEHIKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCC
EEKERIELAVKRRNKNVSAPKPSGVPSPFSGTLRYIHENPDYLINTSKAFSNPSNSIADK
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECHHHHCCCCHHHHHH
VCDKNLSIHLLKKIVNIETGELTATGEKLISNADPQTRRLIRANFKLRFRVPSTPAAETA
HHCCCCHHHHHHHHHCCCCCCEEECHHHHHCCCCHHHHHHHEECCEEEEECCCCCCCCCC
SPAHQEPSHGQHYAAPNDSFFSGFSGEVRRYHEPSTPQYPPAAPAFSEAGPYHAPYYYGQ
CCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PYAPPGDSFFSGFSGEVRRHYEPPTPQYPPATPASSEASLYYDPYYNPYHGQQYAPPGDS
CCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
FFSGFSAEVRRHHEPSTPQYPQNSTSTFGDLSSLNEGAYSTRDFDLNTPAEVTQPWRGDG
HHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCC
YDDVESAASPERIDVDALPSPQNSSAPAGQELALAEEEWLGDEHLITYVGTIADRLRGQP
CHHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHCCCC
GADLLNFADPLLVTQLIQGESEQRNNAMYHIIGRGGPIVFLPVNAPDSHWSLLVIDQRTG
CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCC
NAFHYDSLVSPGDARNAVHTRQYQLASRAARAMGITGPVQGMPIARQRDGHSCGDHVLQA
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
TEQLAQSVIAGTFGQPGTMDLSDLQTDRGLIADTIANATADRNAEPPPATSRTHERPAKK
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
NKKWWKF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA