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The map label for this gene is oruR [H]

Identifier: 120612992

GI number: 120612992

Start: 4839926

End: 4841026

Strand: Direct

Name: oruR [H]

Synonym: Aave_4356

Alternate gene names: 120612992

Gene position: 4839926-4841026 (Clockwise)

Preceding gene: 120612978

Following gene: 120612995

Centisome position: 90.42

GC content: 71.21

Gene sequence:

>1101_bases
ATGACGACGAAGTCCCCGGCACCTGCCAGCTCCGTGCCACAGCCGGTGGCGGCCACCCCCATCGCCTTCGTCAATGCCAT
CGTGCATGCCTATGTCCAGCGCGGCATGAGCCCCGCCCACGCCCTGGCAACGGCACAAATCCCGCCACACAGCCTGCAAA
ACCCGCAGGCCCGCATCACCGCCTTGCAGATGGAGGCGCTGTCCGCCGCCGCCATGCGCGAGCTCGACGACGAGGCCCTC
GGCTGGTTCTCCCGGCGCCTGCCCTGGGGCAGCTACGGCATGCTGGCGCGCGCCTCCATCAGCTCACCCACGCTGGGCAT
CGCACTGCGCCGCTGGTGCCGCCACCATGCGCTCATCGCGGACGACATCGGCCTGCACCTGGATGCCGTGGACGGTACCG
CCACGCTGTCGCTGTCCGAGCACCGCGACCTGGGCATGCTGCGCGAGTTCTGCACCGTCTCCGTGCTGCGCAATGCCCTC
GGGCTCGCCTGCTGGTTCATCGATTCCCGGCTTCCACTGCTGGACGCGTCCTTTCCGTTCCAGCCGCCGCCGCATGCCAC
GGTCTATCCGCTGCTCTTCGGGGTGGCTCCGCGCTTCGGCGCTTCCCAGGCCCTGCTGCGGTTCGACGCCCGATACCTCG
ACCTGCCCCTGCAGCGCGACGAGGACGCGCTGCGGCTGATGCTGCAACGCGCCCTGCCCCTCACCGTGCGCCAGTACCGC
CGCGACCGGCTGCTGGTGCAGCGCGTGCGGCAGGCGCTGGCCCACGCGCCGGAGCTGTCCCACAGCGCGCAGACGATCGC
CGCCGCGCTGCACGTCTCGGCCCGCACCCTGCACCGCCAGCTCCGGGAGGAAGGCGCCTCGCTGCAGGCACTCAAGGACG
AGGCCCGCCAGCAGCGCGCGCGGGATCTGCTCCAGCGCACGGACCGGCCCGTCAAGGCCGTGGCCCGGGCGGCCGGCTTC
GCCAGCGAGAAAAGCTTCATGCGCGCCTTCCGGCAGTGGACGGGAATGTCGCCAGCAGAATACCGGCGCCAGCGATGCGC
CAGGGCCATGGAAAGCCGCCCCTTCCACGCCGGCACGTCGGCAACATCCGCCGTTTCCTGA

Upstream 100 bases:

>100_bases
GCGGCCACACGGGCCAAGCATACGCCTGCGAGCCGCCGTCAGGGCCACCGATCAGGCCACACAGGTTGCAATTCGCGCCA
CCGGACTGCACACTCCCGGC

Downstream 100 bases:

>100_bases
CAGACTACGGGATCAGCAAAACACACCGGCCGATCCGTACTCATTTACCCGGATGCCGGAGATCTCCGCCATCTGGAAAA
ACAGGTAAAAACCGGATAGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTTKSPAPASSVPQPVAATPIAFVNAIVHAYVQRGMSPAHALATAQIPPHSLQNPQARITALQMEALSAAAMRELDDEAL
GWFSRRLPWGSYGMLARASISSPTLGIALRRWCRHHALIADDIGLHLDAVDGTATLSLSEHRDLGMLREFCTVSVLRNAL
GLACWFIDSRLPLLDASFPFQPPPHATVYPLLFGVAPRFGASQALLRFDARYLDLPLQRDEDALRLMLQRALPLTVRQYR
RDRLLVQRVRQALAHAPELSHSAQTIAAALHVSARTLHRQLREEGASLQALKDEARQQRARDLLQRTDRPVKAVARAAGF
ASEKSFMRAFRQWTGMSPAEYRRQRCARAMESRPFHAGTSATSAVS

Sequences:

>Translated_366_residues
MTTKSPAPASSVPQPVAATPIAFVNAIVHAYVQRGMSPAHALATAQIPPHSLQNPQARITALQMEALSAAAMRELDDEAL
GWFSRRLPWGSYGMLARASISSPTLGIALRRWCRHHALIADDIGLHLDAVDGTATLSLSEHRDLGMLREFCTVSVLRNAL
GLACWFIDSRLPLLDASFPFQPPPHATVYPLLFGVAPRFGASQALLRFDARYLDLPLQRDEDALRLMLQRALPLTVRQYR
RDRLLVQRVRQALAHAPELSHSAQTIAAALHVSARTLHRQLREEGASLQALKDEARQQRARDLLQRTDRPVKAVARAAGF
ASEKSFMRAFRQWTGMSPAEYRRQRCARAMESRPFHAGTSATSAVS
>Mature_365_residues
TTKSPAPASSVPQPVAATPIAFVNAIVHAYVQRGMSPAHALATAQIPPHSLQNPQARITALQMEALSAAAMRELDDEALG
WFSRRLPWGSYGMLARASISSPTLGIALRRWCRHHALIADDIGLHLDAVDGTATLSLSEHRDLGMLREFCTVSVLRNALG
LACWFIDSRLPLLDASFPFQPPPHATVYPLLFGVAPRFGASQALLRFDARYLDLPLQRDEDALRLMLQRALPLTVRQYRR
DRLLVQRVRQALAHAPELSHSAQTIAAALHVSARTLHRQLREEGASLQALKDEARQQRARDLLQRTDRPVKAVARAAGFA
SEKSFMRAFRQWTGMSPAEYRRQRCARAMESRPFHAGTSATSAVS

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786758, Length=99, Percent_Identity=31.3131313131313, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 40493; Mature: 40362

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKSPAPASSVPQPVAATPIAFVNAIVHAYVQRGMSPAHALATAQIPPHSLQNPQARIT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHH
ALQMEALSAAAMRELDDEALGWFSRRLPWGSYGMLARASISSPTLGIALRRWCRHHALIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCHHH
DDIGLHLDAVDGTATLSLSEHRDLGMLREFCTVSVLRNALGLACWFIDSRLPLLDASFPF
HCCCCEEECCCCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
QPPPHATVYPLLFGVAPRFGASQALLRFDARYLDLPLQRDEDALRLMLQRALPLTVRQYR
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHH
RDRLLVQRVRQALAHAPELSHSAQTIAAALHVSARTLHRQLREEGASLQALKDEARQQRA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RDLLQRTDRPVKAVARAAGFASEKSFMRAFRQWTGMSPAEYRRQRCARAMESRPFHAGTS
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
ATSAVS
CHHCCC
>Mature Secondary Structure 
TTKSPAPASSVPQPVAATPIAFVNAIVHAYVQRGMSPAHALATAQIPPHSLQNPQARIT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHH
ALQMEALSAAAMRELDDEALGWFSRRLPWGSYGMLARASISSPTLGIALRRWCRHHALIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCHHH
DDIGLHLDAVDGTATLSLSEHRDLGMLREFCTVSVLRNALGLACWFIDSRLPLLDASFPF
HCCCCEEECCCCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
QPPPHATVYPLLFGVAPRFGASQALLRFDARYLDLPLQRDEDALRLMLQRALPLTVRQYR
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHH
RDRLLVQRVRQALAHAPELSHSAQTIAAALHVSARTLHRQLREEGASLQALKDEARQQRA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RDLLQRTDRPVKAVARAAGFASEKSFMRAFRQWTGMSPAEYRRQRCARAMESRPFHAGTS
HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
ATSAVS
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]