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The map label for this gene is 120612976

Identifier: 120612976

GI number: 120612976

Start: 4816002

End: 4817138

Strand: Direct

Name: 120612976

Synonym: Aave_4340

Alternate gene names: NA

Gene position: 4816002-4817138 (Clockwise)

Preceding gene: 120612975

Following gene: 120612978

Centisome position: 89.97

GC content: 71.59

Gene sequence:

>1137_bases
ATGTCCGCGGAGTCGTTCGGGCAGCGCATCCCGCGCGCTCCGGGCCACTGCGAGAGTGCAATTCCCCACATTGCAAGGAA
CTGCATCCAGGGCTATTTCACCGATCTCCTCCTCGCGGCTCCAGGGCGTCCAGGCGCCTGGCGCGCAGGACACCGCCGGC
GCGCAGACCCTGCTCGCGCAGGTGCTGATGGCACTGCTCGAAGGCCTGTTCCAGAAGCTGTCCAAGCATCGCCAGGCGCC
CTCTCCGCAATCCTCCGAGCAGGGCGGCGGCCCGGCCTCCGGCGAAGGCAACCGCAGCGGCGGTGGCAGCGGCAGCCCGT
CCGGCGCCGCGCCATCGGCAGCCCCGGCACCGGCCGCCGCTCCCGCCTCCGGCGCCAAGCCCGCGGCCTCCGGCCCCGGC
GCCACGCAACCCGCGGCGACCGGCGACCTCGGATCGAAGAGCGTGGACGAGGCCCAGGGCAAGGTCCAGCCGAAATTCCT
GCCGGTGCTGCGCGGCGACGAGCAGCAACAGGACGCCAAGGTCCGGACGCAGGCCGACTTCGGCCGTGCGGTGGACGAGA
CCGCCAAGGAATACGGCCTGGACCCCAGCGTCTTCCGCGCCCAGCTCCAGTCGGAGTCCGGCGCCTTCACCCAGGGCTTC
CGCAAGGCGATGCAGCACGAGGGCGACCTCGACCGCGCCGGCGACAACAACACCTCGATCGGCCTGGGCCAGATCTCCCG
CAAGTTCATGGATGGCCGCGACTGGTCCGCCGACGGCCCCGGCAACAGCCGCGTCGGCGGCCAGAAGGTGCCTTCCGAGC
AATACGAGAAGAGCGTGACCGTGCAACTGCGGATGGCGGCGTCCAACATGGCGCAGCGCATCGCGGACCACGGCGGCCTG
AAGCAGGGCCTGTCCTACTACGTCTCGGGCGATGCCAACCCCGCCAACCCCAAGGCGCAGGAATACCTCCAGCACATCAA
CGAGGCGCTGCGCAACCCCGAGGTGATGAACCCGGGCCGCTGAACCCTAGTCGCCGCGCGCCAGCACGGGCGCGATCGCA
CGGCCCGTGTGCGTGCCCAGGCGCACCACCTCCTCGGGCGTGGCGGCCGCCACGATGCGGCCGCCGTCCCTGCCGCCCTC
GGGACCCAGGTCGATGA

Upstream 100 bases:

>100_bases
GGCGCCTACGAACGCACGATGGCGCTGTACCGGCGCATGCTCGACGCGATCCGCACCGGGCGCATCGACGCCTTCGCCTG
AGGCGCGGGCGCGGCTTCGC

Downstream 100 bases:

>100_bases
TCCAGTCGGCCTCGGCGATCACGTCGAGGTCGTGCTCGATCACCACCACGCTGTGGCCGCCATCGACCAGGCGATGCAGC
ACGCGGATGAGCTTGTGGAC

Product: LigA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSAESFGQRIPRAPGHCESAIPHIARNCIQGYFTDLLLAAPGRPGAWRAGHRRRADPARAGADGTARRPVPEAVQASPGA
LSAILRAGRRPGLRRRQPQRRWQRQPVRRRAIGSPGTGRRSRLRRQARGLRPRRHATRGDRRPRIEERGRGPGQGPAEIP
AGAARRRAATGRQGPDAGRLRPCGGRDRQGIRPGPQRLPRPAPVGVRRLHPGLPQGDAARGRPRPRRRQQHLDRPGPDLP
QVHGWPRLVRRRPRQQPRRRPEGAFRAIREERDRATADGGVQHGAAHRGPRRPEAGPVLLRLGRCQPRQPQGAGIPPAHQ
RGAAQPRGDEPGPLNPSRRAPARARSHGPCACPGAPPPRAWRPPRCGRRPCRPRDPGR

Sequences:

>Translated_378_residues
MSAESFGQRIPRAPGHCESAIPHIARNCIQGYFTDLLLAAPGRPGAWRAGHRRRADPARAGADGTARRPVPEAVQASPGA
LSAILRAGRRPGLRRRQPQRRWQRQPVRRRAIGSPGTGRRSRLRRQARGLRPRRHATRGDRRPRIEERGRGPGQGPAEIP
AGAARRRAATGRQGPDAGRLRPCGGRDRQGIRPGPQRLPRPAPVGVRRLHPGLPQGDAARGRPRPRRRQQHLDRPGPDLP
QVHGWPRLVRRRPRQQPRRRPEGAFRAIREERDRATADGGVQHGAAHRGPRRPEAGPVLLRLGRCQPRQPQGAGIPPAHQ
RGAAQPRGDEPGPLNPSRRAPARARSHGPCACPGAPPPRAWRPPRCGRRPCRPRDPGR
>Mature_377_residues
SAESFGQRIPRAPGHCESAIPHIARNCIQGYFTDLLLAAPGRPGAWRAGHRRRADPARAGADGTARRPVPEAVQASPGAL
SAILRAGRRPGLRRRQPQRRWQRQPVRRRAIGSPGTGRRSRLRRQARGLRPRRHATRGDRRPRIEERGRGPGQGPAEIPA
GAARRRAATGRQGPDAGRLRPCGGRDRQGIRPGPQRLPRPAPVGVRRLHPGLPQGDAARGRPRPRRRQQHLDRPGPDLPQ
VHGWPRLVRRRPRQQPRRRPEGAFRAIREERDRATADGGVQHGAAHRGPRRPEAGPVLLRLGRCQPRQPQGAGIPPAHQR
GAAQPRGDEPGPLNPSRRAPARARSHGPCACPGAPPPRAWRPPRCGRRPCRPRDPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41684; Mature: 41553

Theoretical pI: Translated: 12.72; Mature: 12.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAESFGQRIPRAPGHCESAIPHIARNCIQGYFTDLLLAAPGRPGAWRAGHRRRADPARA
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
GADGTARRPVPEAVQASPGALSAILRAGRRPGLRRRQPQRRWQRQPVRRRAIGSPGTGRR
CCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHH
SRLRRQARGLRPRRHATRGDRRPRIEERGRGPGQGPAEIPAGAARRRAATGRQGPDAGRL
HHHHHHHHCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
RPCGGRDRQGIRPGPQRLPRPAPVGVRRLHPGLPQGDAARGRPRPRRRQQHLDRPGPDLP
CCCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
QVHGWPRLVRRRPRQQPRRRPEGAFRAIREERDRATADGGVQHGAAHRGPRRPEAGPVLL
CCCCCHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCHHCCCCCCCCCCCHHH
RLGRCQPRQPQGAGIPPAHQRGAAQPRGDEPGPLNPSRRAPARARSHGPCACPGAPPPRA
HHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
WRPPRCGRRPCRPRDPGR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAESFGQRIPRAPGHCESAIPHIARNCIQGYFTDLLLAAPGRPGAWRAGHRRRADPARA
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHC
GADGTARRPVPEAVQASPGALSAILRAGRRPGLRRRQPQRRWQRQPVRRRAIGSPGTGRR
CCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHH
SRLRRQARGLRPRRHATRGDRRPRIEERGRGPGQGPAEIPAGAARRRAATGRQGPDAGRL
HHHHHHHHCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
RPCGGRDRQGIRPGPQRLPRPAPVGVRRLHPGLPQGDAARGRPRPRRRQQHLDRPGPDLP
CCCCCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
QVHGWPRLVRRRPRQQPRRRPEGAFRAIREERDRATADGGVQHGAAHRGPRRPEAGPVLL
CCCCCHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCHHCCCCCCCCCCCHHH
RLGRCQPRQPQGAGIPPAHQRGAAQPRGDEPGPLNPSRRAPARARSHGPCACPGAPPPRA
HHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
WRPPRCGRRPCRPRDPGR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA