| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is livK [C]
Identifier: 120612978
GI number: 120612978
Start: 4823142
End: 4824263
Strand: Direct
Name: livK [C]
Synonym: Aave_4342
Alternate gene names: 120612978
Gene position: 4823142-4824263 (Clockwise)
Preceding gene: 120612976
Following gene: 120612992
Centisome position: 90.11
GC content: 68.72
Gene sequence:
>1122_bases ATGGCCCATTCCTGGCAGACCACCGGCGCCGCCCTGGCCCTCGCGGCCGCTTCCCTGTTCTCTCCGGCCGCCTGGAGCCA GTTGCAGGTGGGACAGACGGCCGGCTTCACCGGGCCCGTGTCCTCGGGCGTGCAGGAAACCACCGAGGGCGCGAAGCTCT ACCTGGATGCGGTGAACGCGCGGGGCGGCGTGAATGGGCAGAAGATCGAGCTCATTTCGCTCGACGACAAGTTCGACCCC GCCCTGGCGCAGGCCAACGCGCGCAAGCTCATCGAGGAGCAGAACGTGCTCGCGATGTTCCTCACCCGCGGCACGCCCCA CACGGAAGCCATCATCCCCCTGCTCGACAAATTCGACGTCCCCCTCGTGGCTCCCTCCACGGGTGCGATGGTGCTGCACC GCCCCGTGCGCCGACACGTATTCAACGTGCGAGCCCCCTACCAGCGCGAAGCCGAGAAGGCCATCACCCACCTGGCGTCG ATGGGCATTTCCCGGATCGCGGTGGTCCTCACCGACGACAGCTTCGGCTCCGACGGGCTGGCGGGCGCGCTCAAGGGCTT CGAGGCCGCGAAGCTCAAGCCCGTGCTGGAGGAGCGCTTCGACCGGGCCAAGCCCGATTTCTCCGCCATCGCGCCCAAGC TGGCGCAGACGCAGGCCCAGGCCGTGCTCATGATCGCATCGGGGACCGCGGCGGTCGAAGGCTATGCGGCCTTCCGGGCG GCCGGCTCGGGTGCCCAGCTCGTCACCCTGTCCAACAACGCATCGTCCGGATTCGCCAGGAGCCTGGGCGCGAATGCGCG CGGCGTCATCGTCACGCAGGTGTTCCCGAACGAACGGGCCACGAACTATCCGCTCGTGCGCGAGGCGCACGACCTGGCGA AAGCGCACGGCAAGGAAGTGAGCCCCGCCATGCTCGAAGGCATAGCGGCGGCCAAGGTGCTGGTGGAGGGACTGCGCCGC GCGGGCGCCAAGCCCACGCGCGAACGCCTGCAGGCGGCACTGGAGGGCATCCAGAAATTCGACATCGGCGGCCTGGAGGT GAACTTCAGCCCCGAGGACCACACCGGCCTGGATTTCGCCGACCTGTCCATCATCGGCACCGACGGCAAGTTCCGCCGCT GA
Upstream 100 bases:
>100_bases CTTCCGCGGACGTTCTGCACCGCAGCAACGGCGTACCGCCGCCGGCGCCGGCCCCGCGCCCATCGGACCACCCCACGCCT TTCCTGGAGATTCCACCATC
Downstream 100 bases:
>100_bases GCGGCGGCGGAAGTCCGGGCGGGCCCGCCCCGAGATGGCCACCCCGCACCCGGGGACCCGCATGGAAAAAGCCCGCTCCT GCAGCGGGCTTTTTCGTTTC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MAHSWQTTGAALALAAASLFSPAAWSQLQVGQTAGFTGPVSSGVQETTEGAKLYLDAVNARGGVNGQKIELISLDDKFDP ALAQANARKLIEEQNVLAMFLTRGTPHTEAIIPLLDKFDVPLVAPSTGAMVLHRPVRRHVFNVRAPYQREAEKAITHLAS MGISRIAVVLTDDSFGSDGLAGALKGFEAAKLKPVLEERFDRAKPDFSAIAPKLAQTQAQAVLMIASGTAAVEGYAAFRA AGSGAQLVTLSNNASSGFARSLGANARGVIVTQVFPNERATNYPLVREAHDLAKAHGKEVSPAMLEGIAAAKVLVEGLRR AGAKPTRERLQAALEGIQKFDIGGLEVNFSPEDHTGLDFADLSIIGTDGKFRR
Sequences:
>Translated_373_residues MAHSWQTTGAALALAAASLFSPAAWSQLQVGQTAGFTGPVSSGVQETTEGAKLYLDAVNARGGVNGQKIELISLDDKFDP ALAQANARKLIEEQNVLAMFLTRGTPHTEAIIPLLDKFDVPLVAPSTGAMVLHRPVRRHVFNVRAPYQREAEKAITHLAS MGISRIAVVLTDDSFGSDGLAGALKGFEAAKLKPVLEERFDRAKPDFSAIAPKLAQTQAQAVLMIASGTAAVEGYAAFRA AGSGAQLVTLSNNASSGFARSLGANARGVIVTQVFPNERATNYPLVREAHDLAKAHGKEVSPAMLEGIAAAKVLVEGLRR AGAKPTRERLQAALEGIQKFDIGGLEVNFSPEDHTGLDFADLSIIGTDGKFRR >Mature_372_residues AHSWQTTGAALALAAASLFSPAAWSQLQVGQTAGFTGPVSSGVQETTEGAKLYLDAVNARGGVNGQKIELISLDDKFDPA LAQANARKLIEEQNVLAMFLTRGTPHTEAIIPLLDKFDVPLVAPSTGAMVLHRPVRRHVFNVRAPYQREAEKAITHLASM GISRIAVVLTDDSFGSDGLAGALKGFEAAKLKPVLEERFDRAKPDFSAIAPKLAQTQAQAVLMIASGTAAVEGYAAFRAA GSGAQLVTLSNNASSGFARSLGANARGVIVTQVFPNERATNYPLVREAHDLAKAHGKEVSPAMLEGIAAAKVLVEGLRRA GAKPTRERLQAALEGIQKFDIGGLEVNFSPEDHTGLDFADLSIIGTDGKFRR
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39400; Mature: 39269
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHSWQTTGAALALAAASLFSPAAWSQLQVGQTAGFTGPVSSGVQETTEGAKLYLDAVNA CCCCCCCCHHHHHHHHHHHCCCCHHCCEECCCCCCCCCCHHCCHHHHCCCCEEEEEEECC RGGVNGQKIELISLDDKFDPALAQANARKLIEEQNVLAMFLTRGTPHTEAIIPLLDKFDV CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCC PLVAPSTGAMVLHRPVRRHVFNVRAPYQREAEKAITHLASMGISRIAVVLTDDSFGSDGL CEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCH AGALKGFEAAKLKPVLEERFDRAKPDFSAIAPKLAQTQAQAVLMIASGTAAVEGYAAFRA HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHC AGSGAQLVTLSNNASSGFARSLGANARGVIVTQVFPNERATNYPLVREAHDLAKAHGKEV CCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC SPAMLEGIAAAKVLVEGLRRAGAKPTRERLQAALEGIQKFDIGGLEVNFSPEDHTGLDFA CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE DLSIIGTDGKFRR EEEEECCCCCCCC >Mature Secondary Structure AHSWQTTGAALALAAASLFSPAAWSQLQVGQTAGFTGPVSSGVQETTEGAKLYLDAVNA CCCCCCCHHHHHHHHHHHCCCCHHCCEECCCCCCCCCCHHCCHHHHCCCCEEEEEEECC RGGVNGQKIELISLDDKFDPALAQANARKLIEEQNVLAMFLTRGTPHTEAIIPLLDKFDV CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCC PLVAPSTGAMVLHRPVRRHVFNVRAPYQREAEKAITHLASMGISRIAVVLTDDSFGSDGL CEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCH AGALKGFEAAKLKPVLEERFDRAKPDFSAIAPKLAQTQAQAVLMIASGTAAVEGYAAFRA HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHC AGSGAQLVTLSNNASSGFARSLGANARGVIVTQVFPNERATNYPLVREAHDLAKAHGKEV CCCCCEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC SPAMLEGIAAAKVLVEGLRRAGAKPTRERLQAALEGIQKFDIGGLEVNFSPEDHTGLDFA CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE DLSIIGTDGKFRR EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]