| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612975
Identifier: 120612975
GI number: 120612975
Start: 4815113
End: 4815982
Strand: Direct
Name: 120612975
Synonym: Aave_4339
Alternate gene names: NA
Gene position: 4815113-4815982 (Clockwise)
Preceding gene: 120612974
Following gene: 120612976
Centisome position: 89.96
GC content: 73.56
Gene sequence:
>870_bases ATGAATCTGCGTACTTCTTCCTGGATGCTGGGAGGCGCCGCCCTGTTGCTGCTCGCGGCGGGACTGGGCTTTCTGCAGTC GGGCACGGCCGAGGAATCCTCCGGCGCCCGCGAGGCGGCCGAGGCCGCCCCGGCGTCCCGCCCCCTGTCCGCGGACCTGC TCCGGGAATACAACCGGGCCGGCCGCCTGGATGGGTTCGTCCGCCAGGCGCTTTCGCATCCTGAGGCGGGAGGCGTGTTC TATGCCGTGCAGGCGCTGCGCCGGTGCCACGGCATCGCGGGCGCCGAGGCAGCTACAGCAGGCGCGGCCTCCGGCGAGGC CCGCGCGGCAGCGGAGACCCTGCGCCAACGGTGCGCGGGCCTGTCGGCAGAGGACACGGGGGACCGGCGCATCGCCCGGC TCGCCGCGGACGGGCTGCGCCGCAAGGACCCCTTGCTGGCCCTGGCCCTGCGCGCGGGCAAATCCGCCTACCAGGCCCCG GAGCGGCGCCAATCCCTGCTGTTCGACCTGCTGGCAGCCGGCGACCCGCTGCTCGTGCAGGACGTCGCCACGCGCCTCGC GGTCCGCGCCGACGCCGGCACGGGCACGCGCGGCTACCGGTTCGAGGGCGTCTTCCATCCCCAGTCGCAGGACGACGGCA TGGAGCTCGCCTTCTACCTTCTGCCCTGCGGGCTGGGACTGGACTGCACGCAGGCCGCCGACTGGGACCTGCTGGCCCGC TGCGCCAACGGATTCGAATGCGCCGCCAGCCGCCAGGACTATGTGCAGGCCGTGCTGCGCGACCGTCCTGGCGCCTACGA ACGCACGATGGCGCTGTACCGGCGCATGCTCGACGCGATCCGCACCGGGCGCATCGACGCCTTCGCCTGA
Upstream 100 bases:
>100_bases ACCCACTGCCGCGAAAGGCGCTTCCGCGGACTCGGAAAAGCGCATGCCGCTTCGCGTCGAATGCCCACCGGCCCTGCCTT CCACTCTCCAATGGGGCACC
Downstream 100 bases:
>100_bases GGCGCGGGCGCGGCTTCGCATGTCCGCGGAGTCGTTCGGGCAGCGCATCCCGCGCGCTCCGGGCCACTGCGAGAGTGCAA TTCCCCACATTGCAAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MNLRTSSWMLGGAALLLLAAGLGFLQSGTAEESSGAREAAEAAPASRPLSADLLREYNRAGRLDGFVRQALSHPEAGGVF YAVQALRRCHGIAGAEAATAGAASGEARAAAETLRQRCAGLSAEDTGDRRIARLAADGLRRKDPLLALALRAGKSAYQAP ERRQSLLFDLLAAGDPLLVQDVATRLAVRADAGTGTRGYRFEGVFHPQSQDDGMELAFYLLPCGLGLDCTQAADWDLLAR CANGFECAASRQDYVQAVLRDRPGAYERTMALYRRMLDAIRTGRIDAFA
Sequences:
>Translated_289_residues MNLRTSSWMLGGAALLLLAAGLGFLQSGTAEESSGAREAAEAAPASRPLSADLLREYNRAGRLDGFVRQALSHPEAGGVF YAVQALRRCHGIAGAEAATAGAASGEARAAAETLRQRCAGLSAEDTGDRRIARLAADGLRRKDPLLALALRAGKSAYQAP ERRQSLLFDLLAAGDPLLVQDVATRLAVRADAGTGTRGYRFEGVFHPQSQDDGMELAFYLLPCGLGLDCTQAADWDLLAR CANGFECAASRQDYVQAVLRDRPGAYERTMALYRRMLDAIRTGRIDAFA >Mature_289_residues MNLRTSSWMLGGAALLLLAAGLGFLQSGTAEESSGAREAAEAAPASRPLSADLLREYNRAGRLDGFVRQALSHPEAGGVF YAVQALRRCHGIAGAEAATAGAASGEARAAAETLRQRCAGLSAEDTGDRRIARLAADGLRRKDPLLALALRAGKSAYQAP ERRQSLLFDLLAAGDPLLVQDVATRLAVRADAGTGTRGYRFEGVFHPQSQDDGMELAFYLLPCGLGLDCTQAADWDLLAR CANGFECAASRQDYVQAVLRDRPGAYERTMALYRRMLDAIRTGRIDAFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30790; Mature: 30790
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRTSSWMLGGAALLLLAAGLGFLQSGTAEESSGAREAAEAAPASRPLSADLLREYNRA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHC GRLDGFVRQALSHPEAGGVFYAVQALRRCHGIAGAEAATAGAASGEARAAAETLRQRCAG CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCC LSAEDTGDRRIARLAADGLRRKDPLLALALRAGKSAYQAPERRQSLLFDLLAAGDPLLVQ CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHH DVATRLAVRADAGTGTRGYRFEGVFHPQSQDDGMELAFYLLPCGLGLDCTQAADWDLLAR HHHHHHHHHCCCCCCCCCEEECEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH CANGFECAASRQDYVQAVLRDRPGAYERTMALYRRMLDAIRTGRIDAFA HCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLRTSSWMLGGAALLLLAAGLGFLQSGTAEESSGAREAAEAAPASRPLSADLLREYNRA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHC GRLDGFVRQALSHPEAGGVFYAVQALRRCHGIAGAEAATAGAASGEARAAAETLRQRCAG CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCC LSAEDTGDRRIARLAADGLRRKDPLLALALRAGKSAYQAPERRQSLLFDLLAAGDPLLVQ CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCHHHH DVATRLAVRADAGTGTRGYRFEGVFHPQSQDDGMELAFYLLPCGLGLDCTQAADWDLLAR HHHHHHHHHCCCCCCCCCEEECEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH CANGFECAASRQDYVQAVLRDRPGAYERTMALYRRMLDAIRTGRIDAFA HCCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA