| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612974
Identifier: 120612974
GI number: 120612974
Start: 4814548
End: 4815000
Strand: Direct
Name: 120612974
Synonym: Aave_4338
Alternate gene names: NA
Gene position: 4814548-4815000 (Clockwise)
Preceding gene: 120612973
Following gene: 120612975
Centisome position: 89.94
GC content: 67.33
Gene sequence:
>453_bases GTGACGCAGCGGCATGCTGTCCACCTGCTGCTCGCGCTTCTTGCTGTCTCCCGGATAGCGCCATCAGCGGCCAGCCCTGC GGCAACGGCGCCGGGCGCTACGGCCACGGCGCAGACGCCGCTGCAGCGCATCGACATCCTCGGCTCCCATGCCCGCGGAA CCCAAGGCAGCGATGCCGACTGCTCCGACATGAAGATCGACGCCGCACGGGTACGCCATTTCTGGAACCACGCCATCGAG GGCACGGCGGAGGAATACCGGCGGGGCATCGACCTGGCGGACTGCGAAGCCTCGGCAGAAGTGCATTTCCGTCAGGGTGG CAAGGGAACACTGTCCCTGGATGCGGCCACCGGCTGGGGCGCCCTGCAACAGCGGGGCACCACACGCTACTTCTACTGCG ACGTATGCGAAGGCATCCTGGGCCGGAATTTCCGCCCCGATGCACCCCGATAG
Upstream 100 bases:
>100_bases CGGGGTGGGGGGTCCTGGAATGGAAAGGCGCCACGCGCTATTTCCGCTGCGCACCATGCGAAGGCATCCTGGCTCCAGGC TTCGTCGGAGGGACGGCGAA
Downstream 100 bases:
>100_bases CGCGCGGAGCGCACCCACTGCCGCGAAAGGCGCTTCCGCGGACTCGGAAAAGCGCATGCCGCTTCGCGTCGAATGCCCAC CGGCCCTGCCTTCCACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTQRHAVHLLLALLAVSRIAPSAASPAATAPGATATAQTPLQRIDILGSHARGTQGSDADCSDMKIDAARVRHFWNHAIE GTAEEYRRGIDLADCEASAEVHFRQGGKGTLSLDAATGWGALQQRGTTRYFYCDVCEGILGRNFRPDAPR
Sequences:
>Translated_150_residues MTQRHAVHLLLALLAVSRIAPSAASPAATAPGATATAQTPLQRIDILGSHARGTQGSDADCSDMKIDAARVRHFWNHAIE GTAEEYRRGIDLADCEASAEVHFRQGGKGTLSLDAATGWGALQQRGTTRYFYCDVCEGILGRNFRPDAPR >Mature_149_residues TQRHAVHLLLALLAVSRIAPSAASPAATAPGATATAQTPLQRIDILGSHARGTQGSDADCSDMKIDAARVRHFWNHAIEG TAEEYRRGIDLADCEASAEVHFRQGGKGTLSLDAATGWGALQQRGTTRYFYCDVCEGILGRNFRPDAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16073; Mature: 15942
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRHAVHLLLALLAVSRIAPSAASPAATAPGATATAQTPLQRIDILGSHARGTQGSDAD CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC CSDMKIDAARVRHFWNHAIEGTAEEYRRGIDLADCEASAEVHFRQGGKGTLSLDAATGWG CCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCH ALQQRGTTRYFYCDVCEGILGRNFRPDAPR HHHHCCCCEEEEHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQRHAVHLLLALLAVSRIAPSAASPAATAPGATATAQTPLQRIDILGSHARGTQGSDAD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC CSDMKIDAARVRHFWNHAIEGTAEEYRRGIDLADCEASAEVHFRQGGKGTLSLDAATGWG CCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCH ALQQRGTTRYFYCDVCEGILGRNFRPDAPR HHHHCCCCEEEEHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA