| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612973
Identifier: 120612973
GI number: 120612973
Start: 4813937
End: 4814551
Strand: Direct
Name: 120612973
Synonym: Aave_4337
Alternate gene names: NA
Gene position: 4813937-4814551 (Clockwise)
Preceding gene: 120612972
Following gene: 120612974
Centisome position: 89.93
GC content: 66.18
Gene sequence:
>615_bases TTGCCCACGCTGACCATCAACGCGCTCACGCTGTCCTCGAATGCTCTTGTCGCAGCACCTGACCGATGTGACCCACCGGA CACTGGCTATTTCGAAATCGGACGTCCACCGCCACCCCGACGTCAGCCACAAGAACCGCACGGAAGCCGCTACCGCGGCA TGGCAATGATGCAATTCGAACTGAACCTGCGCAGTGCCTCGCTGTGTTTCCTGGTGCTGCTCCATGCAGGCGCTTCTGCA CAGCAGCCCATGAAGGCCGCTCCCCCGTCCCGGTCCATCGGCCCCCTGGGTGCCATCACCCTGCCCCGCGCCGTGGAACC TGCACCCGGCAGCGATGCCGACTGTTCCGACCGGGCCATCGACGAGCAGCGCATTCGCTATTTCTGGGACCATGCCGTGG AGGGGCCGGCCTCCGACTTCCAGCGCGACTTCGACCTGGCCGACTGCACCGCCTCGCCCCGGCTGCACCTGCGCAAGGGG GGGCATGGCGTGCTGCACCTGCATGACGCCACGGGGTGGGGGGTCCTGGAATGGAAAGGCGCCACGCGCTATTTCCGCTG CGCACCATGCGAAGGCATCCTGGCTCCAGGCTTCGTCGGAGGGACGGCGAAGTGA
Upstream 100 bases:
>100_bases GCACACTTCATTGGTGGACCGATCCCCCAGCCCATGCCGTCGTGGTTGGTAGCAGTGTGGTGTTCGAAAACATACCGGCG GAGTGTCCGGCAGCCACCAG
Downstream 100 bases:
>100_bases CGCAGCGGCATGCTGTCCACCTGCTGCTCGCGCTTCTTGCTGTCTCCCGGATAGCGCCATCAGCGGCCAGCCCTGCGGCA ACGGCGCCGGGCGCTACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPTLTINALTLSSNALVAAPDRCDPPDTGYFEIGRPPPPRRQPQEPHGSRYRGMAMMQFELNLRSASLCFLVLLHAGASA QQPMKAAPPSRSIGPLGAITLPRAVEPAPGSDADCSDRAIDEQRIRYFWDHAVEGPASDFQRDFDLADCTASPRLHLRKG GHGVLHLHDATGWGVLEWKGATRYFRCAPCEGILAPGFVGGTAK
Sequences:
>Translated_204_residues MPTLTINALTLSSNALVAAPDRCDPPDTGYFEIGRPPPPRRQPQEPHGSRYRGMAMMQFELNLRSASLCFLVLLHAGASA QQPMKAAPPSRSIGPLGAITLPRAVEPAPGSDADCSDRAIDEQRIRYFWDHAVEGPASDFQRDFDLADCTASPRLHLRKG GHGVLHLHDATGWGVLEWKGATRYFRCAPCEGILAPGFVGGTAK >Mature_203_residues PTLTINALTLSSNALVAAPDRCDPPDTGYFEIGRPPPPRRQPQEPHGSRYRGMAMMQFELNLRSASLCFLVLLHAGASAQ QPMKAAPPSRSIGPLGAITLPRAVEPAPGSDADCSDRAIDEQRIRYFWDHAVEGPASDFQRDFDLADCTASPRLHLRKGG HGVLHLHDATGWGVLEWKGATRYFRCAPCEGILAPGFVGGTAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22069; Mature: 21938
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLTINALTLSSNALVAAPDRCDPPDTGYFEIGRPPPPRRQPQEPHGSRYRGMAMMQFE CCEEEEEEEEECCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE LNLRSASLCFLVLLHAGASAQQPMKAAPPSRSIGPLGAITLPRAVEPAPGSDADCSDRAI ECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHH DEQRIRYFWDHAVEGPASDFQRDFDLADCTASPRLHLRKGGHGVLHLHDATGWGVLEWKG HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEECC ATRYFRCAPCEGILAPGFVGGTAK CCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure PTLTINALTLSSNALVAAPDRCDPPDTGYFEIGRPPPPRRQPQEPHGSRYRGMAMMQFE CEEEEEEEEECCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEE LNLRSASLCFLVLLHAGASAQQPMKAAPPSRSIGPLGAITLPRAVEPAPGSDADCSDRAI ECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHH DEQRIRYFWDHAVEGPASDFQRDFDLADCTASPRLHLRKGGHGVLHLHDATGWGVLEWKG HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEECC ATRYFRCAPCEGILAPGFVGGTAK CCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA