| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611840
Identifier: 120611840
GI number: 120611840
Start: 3511006
End: 3512223
Strand: Reverse
Name: 120611840
Synonym: Aave_3181
Alternate gene names: NA
Gene position: 3512223-3511006 (Counterclockwise)
Preceding gene: 120611855
Following gene: 120611839
Centisome position: 65.62
GC content: 73.07
Gene sequence:
>1218_bases ATGCCGTCGCCGCAGGCCGCGGACGCCCTGTTGCGGGCTGGGCTGCCCACGCGCCCCGCCTGCGATGCCGTGGCGCTGCC GGCGCAGGCGCTGCCGGTGCTGCAAACCGCGGAAGGGATCGTCCATGCCCTGCTGGAGCCCGCCCAGGCGCGGGACGCGG AGGTCGTGCAGCGGCTGCGGCGCAATACCCAGGTGCTGCTGGACAAGGGCATCGATACCCCGGAGAAGCTGCGGAGTTTT CTCTCCACGGCCTGGCGCCACGACGCGGTGCTCGGTTTCGCGGGGCTGGGTTTCAGCAACGGGGCGGGGTACATGACCGG GATCACCGCGGCCAACGAGAAGCTGGTGTCGCTGCTGCCCCCGGATCTGCTGCGGAACACGCCGCGGCTGGGCTTCGTGG TCGGCGTGGGCGTGGGTGCGCTGGACGTGCTGGTGAGGGCGGTCGGCAATGCGGTGGTCGCGCCGCGCCTCTACAACGGC CCTTCCGGGCTGGACCGCCTGCCCGCCGCCCTGCGCCCGGACCCCCATGCCGAGCAGATCCGCAATGCGGGCCTGGCCGC AGGATTCAATGTCGCGAAGAACCTGCCGCGCGTGGTGGAGCCTTTCGTGCAGGCCGCGATCGAGGGCCGGGGCGACAACA GCGTCAACCGCGTGTGGGCCGACCGCATCGACGCGTCGCTGCTCGACGGCTTCGGCGGGATGCTGGCCGCGGGCGCCCGG GGCGTGCACAGGCTCTCGCAGGAGGTGCCCTACGATGCGCGCATGCTGCTGCGCAGCGACCTGGGCGAGGTCATCGACCA GACCCGGCGCCCGTGGAAGGAATCGCTGCAGGGCGTCGGCTCCGCGGCGCTCGAGGGCGCGAAGTCGCTCGTGGCGTCTC CCGTGCCCGTGGCGGTGGTGGCCACGGTGGGGTGCTTCATCGCCGAGCTGTTCGCGGCCAATGCGTCCATCGACCGCGCC GGATCGCCCGCGGGTCTGCCGGCGGACCGGGCGGACGCCGGCATGCTCTCGGGCAAGCGGGCTTCGTCGGTCCTCATCAT GGGGCTGATGTCCGGCACGATCGAGCTGGGAGCGCCCTATGCCGCGCGGGGCGGCGCCTATGTGGCGCGCACGATCCGCC AGGGCCTGCAGCAGACGTCCTTCAGCCTGATGGCCTGGGCCCAGGCCCGCTTCGGCGCCGCGGAGGCGCCGGACCTGGAA GCGGGCCGGCGGGCATGA
Upstream 100 bases:
>100_bases GGGTGCCGACAGCGCGGCCGGGCCCGAGCCCGGGTCTCCACGCGGCTCCCTGCCAGCCCCGGATGCAGGTTCCCTCCGCA GCCTGCGGCGCACGAACTCC
Downstream 100 bases:
>100_bases CCCGCAGGGGCTGCGCAGGCGAGCGCGAATGGATCGCCTGCGCGTTTTCCCGGAGAAAGATGGCCCTTCAATTAGTTGAC ATCTAAATCATCTATTCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPSPQAADALLRAGLPTRPACDAVALPAQALPVLQTAEGIVHALLEPAQARDAEVVQRLRRNTQVLLDKGIDTPEKLRSF LSTAWRHDAVLGFAGLGFSNGAGYMTGITAANEKLVSLLPPDLLRNTPRLGFVVGVGVGALDVLVRAVGNAVVAPRLYNG PSGLDRLPAALRPDPHAEQIRNAGLAAGFNVAKNLPRVVEPFVQAAIEGRGDNSVNRVWADRIDASLLDGFGGMLAAGAR GVHRLSQEVPYDARMLLRSDLGEVIDQTRRPWKESLQGVGSAALEGAKSLVASPVPVAVVATVGCFIAELFAANASIDRA GSPAGLPADRADAGMLSGKRASSVLIMGLMSGTIELGAPYAARGGAYVARTIRQGLQQTSFSLMAWAQARFGAAEAPDLE AGRRA
Sequences:
>Translated_405_residues MPSPQAADALLRAGLPTRPACDAVALPAQALPVLQTAEGIVHALLEPAQARDAEVVQRLRRNTQVLLDKGIDTPEKLRSF LSTAWRHDAVLGFAGLGFSNGAGYMTGITAANEKLVSLLPPDLLRNTPRLGFVVGVGVGALDVLVRAVGNAVVAPRLYNG PSGLDRLPAALRPDPHAEQIRNAGLAAGFNVAKNLPRVVEPFVQAAIEGRGDNSVNRVWADRIDASLLDGFGGMLAAGAR GVHRLSQEVPYDARMLLRSDLGEVIDQTRRPWKESLQGVGSAALEGAKSLVASPVPVAVVATVGCFIAELFAANASIDRA GSPAGLPADRADAGMLSGKRASSVLIMGLMSGTIELGAPYAARGGAYVARTIRQGLQQTSFSLMAWAQARFGAAEAPDLE AGRRA >Mature_404_residues PSPQAADALLRAGLPTRPACDAVALPAQALPVLQTAEGIVHALLEPAQARDAEVVQRLRRNTQVLLDKGIDTPEKLRSFL STAWRHDAVLGFAGLGFSNGAGYMTGITAANEKLVSLLPPDLLRNTPRLGFVVGVGVGALDVLVRAVGNAVVAPRLYNGP SGLDRLPAALRPDPHAEQIRNAGLAAGFNVAKNLPRVVEPFVQAAIEGRGDNSVNRVWADRIDASLLDGFGGMLAAGARG VHRLSQEVPYDARMLLRSDLGEVIDQTRRPWKESLQGVGSAALEGAKSLVASPVPVAVVATVGCFIAELFAANASIDRAG SPAGLPADRADAGMLSGKRASSVLIMGLMSGTIELGAPYAARGGAYVARTIRQGLQQTSFSLMAWAQARFGAAEAPDLEA GRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42228; Mature: 42097
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPQAADALLRAGLPTRPACDAVALPAQALPVLQTAEGIVHALLEPAQARDAEVVQRLR CCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RNTQVLLDKGIDTPEKLRSFLSTAWRHDAVLGFAGLGFSNGAGYMTGITAANEKLVSLLP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHCC PDLLRNTPRLGFVVGVGVGALDVLVRAVGNAVVAPRLYNGPSGLDRLPAALRPDPHAEQI HHHHHCCCCCEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCHHCCCCCCHHHH RNAGLAAGFNVAKNLPRVVEPFVQAAIEGRGDNSVNRVWADRIDASLLDGFGGMLAAGAR HHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVHRLSQEVPYDARMLLRSDLGEVIDQTRRPWKESLQGVGSAALEGAKSLVASPVPVAVV HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ATVGCFIAELFAANASIDRAGSPAGLPADRADAGMLSGKRASSVLIMGLMSGTIELGAPY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHCCCCC AARGGAYVARTIRQGLQQTSFSLMAWAQARFGAAEAPDLEAGRRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PSPQAADALLRAGLPTRPACDAVALPAQALPVLQTAEGIVHALLEPAQARDAEVVQRLR CCCHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH RNTQVLLDKGIDTPEKLRSFLSTAWRHDAVLGFAGLGFSNGAGYMTGITAANEKLVSLLP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHCC PDLLRNTPRLGFVVGVGVGALDVLVRAVGNAVVAPRLYNGPSGLDRLPAALRPDPHAEQI HHHHHCCCCCEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCHHCCCCCCHHHH RNAGLAAGFNVAKNLPRVVEPFVQAAIEGRGDNSVNRVWADRIDASLLDGFGGMLAAGAR HHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GVHRLSQEVPYDARMLLRSDLGEVIDQTRRPWKESLQGVGSAALEGAKSLVASPVPVAVV HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ATVGCFIAELFAANASIDRAGSPAGLPADRADAGMLSGKRASSVLIMGLMSGTIELGAPY HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHCCCCC AARGGAYVARTIRQGLQQTSFSLMAWAQARFGAAEAPDLEAGRRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA