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The map label for this gene is 120611828

Identifier: 120611828

GI number: 120611828

Start: 3498266

End: 3498658

Strand: Reverse

Name: 120611828

Synonym: Aave_3169

Alternate gene names: NA

Gene position: 3498658-3498266 (Counterclockwise)

Preceding gene: 120611829

Following gene: 120611827

Centisome position: 65.36

GC content: 68.19

Gene sequence:

>393_bases
ATGCAAGTCCTTCTTCCCCCCGGATGGCCCCGGCCCAAGGGTTACGCCAACGGCGTCGCGGCGCGCGGCCGCATGGTCTT
CGTGGCCGGCATGATCGGCTGGGACGCCCAGGGCGTGTTCCACACCGACACGCTGTGCGGCCAGGTGCGGCAGGCGCTGC
AGAACATCGTCGAGGTGCTCGCGGAAGGCGGCGCGCGCCCCGAGCACATCGTGCGCATGACCTGGTACGTGACCGACAAG
AAGGACTACGTGGCCTCGCTGCGGCAGATCGGCCAGGACTTCCGCGAGATCATCGGCAGCTTCAACGCGGCGATGACGGC
GGTGGAGGTCTCGGCGCTGATCGAGGACCGTGCCAAGGTCGAGATCGAAGTCACGGCCGTGGTGCCGGACTGA

Upstream 100 bases:

>100_bases
CGCGCTCGCGGCCGACCCGGCGCTGTGGCAGCGCTACGTGGGCGTGTGACCCCCGCTCAACGATGACGATTTTCGAGAAC
CGAACGGACAGGAGATTCGC

Downstream 100 bases:

>100_bases
TGCGCGGGTGGCCCCGATGGCGATGGTGTTTCCCCACGGCTTCGCGAACCAGCAGGACATCGACGACGCCTACGATCCCC
TGAAACGCGCGCACGATGCC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor; Pyrimidine Utilization Protein C; Aerobic 2-Aminobenzoate Metabolism Related Protein; Translational Inhibitor; Endoribonuclease Translation Initiation Inhibitor; Endoribonuclease L-PSP Superfamily

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQVLLPPGWPRPKGYANGVAARGRMVFVAGMIGWDAQGVFHTDTLCGQVRQALQNIVEVLAEGGARPEHIVRMTWYVTDK
KDYVASLRQIGQDFREIIGSFNAAMTAVEVSALIEDRAKVEIEVTAVVPD

Sequences:

>Translated_130_residues
MQVLLPPGWPRPKGYANGVAARGRMVFVAGMIGWDAQGVFHTDTLCGQVRQALQNIVEVLAEGGARPEHIVRMTWYVTDK
KDYVASLRQIGQDFREIIGSFNAAMTAVEVSALIEDRAKVEIEVTAVVPD
>Mature_130_residues
MQVLLPPGWPRPKGYANGVAARGRMVFVAGMIGWDAQGVFHTDTLCGQVRQALQNIVEVLAEGGARPEHIVRMTWYVTDK
KDYVASLRQIGQDFREIIGSFNAAMTAVEVSALIEDRAKVEIEVTAVVPD

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14269; Mature: 14269

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLLPPGWPRPKGYANGVAARGRMVFVAGMIGWDAQGVFHTDTLCGQVRQALQNIVEVL
CEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
AEGGARPEHIVRMTWYVTDKKDYVASLRQIGQDFREIIGSFNAAMTAVEVSALIEDRAKV
HCCCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
EIEVTAVVPD
EEEEEEECCC
>Mature Secondary Structure
MQVLLPPGWPRPKGYANGVAARGRMVFVAGMIGWDAQGVFHTDTLCGQVRQALQNIVEVL
CEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
AEGGARPEHIVRMTWYVTDKKDYVASLRQIGQDFREIIGSFNAAMTAVEVSALIEDRAKV
HCCCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
EIEVTAVVPD
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA