| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611827
Identifier: 120611827
GI number: 120611827
Start: 3497383
End: 3498249
Strand: Reverse
Name: 120611827
Synonym: Aave_3168
Alternate gene names: NA
Gene position: 3498249-3497383 (Counterclockwise)
Preceding gene: 120611828
Following gene: 120611821
Centisome position: 65.35
GC content: 72.78
Gene sequence:
>867_bases ATGGCGATGGTGTTTCCCCACGGCTTCGCGAACCAGCAGGACATCGACGACGCCTACGATCCCCTGAAACGCGCGCACGA TGCCGCCGCCTCGAACCGGCATTTCGCCGAACGCAGCGAGGCCGCGCGCCGGGCGCTGCCGTACCGGCCCGCCGTGCCCT ACGGCCCCACGCGGGCGGAAACGCTGGACATCTTCCCGGCCGGACGTCCCGGCGCGCCGGTGTTCTTCTTCATCCACGGC GGCTACTGGCGCGCCCGCAGCGCGCGCGATTTCAGCTGCGTGGCGCAGGGCCCGCATGCGCTGGGCTTCACCACCGTGGT GGTGGATTACGCCCTGTGCCCGGCCGTCACGATCGACGAGATCGTGCGACAGGTGCGTGCCGCGGCGGCCTGGACGGTTC GCCGCATCGGCGAGCACGGCGGCGACCCGGCGCGCATCGTCGTCGGCGGGCATTCCGCGGGCGGACACCTGGGCGCGATG CTGCTGTGCACGCCCTGGGAGCAAGACTACGGCCTGCCGGCCGATCCGTTCGCGGGCGCCGTGCTGGTGAGCGGCCTCTA CGACATCGCGCCGCTGCGCTACAGCTACCTGCAGCCCGCGATCCAGCTGGACGAGGGCACGGTGCGCCGCAATTCCCCCG TGCTGCATGCACGCCCCAGTGCCACGCCCGTCACGCTCTGCTGGGGCGGGGCCGAGCAGGAGGCCTTCGCCCGGCAGTCC CAGGGCTTCCATGCCGCGTGGCGTGCGGCCGGCAACGCGGCCGAGCTGCATCCGATGCCGGGGGCCGACCACTTCGATGC CGTGCAGGCCTTCGAGGATCCGGCCAGCCTGCCGTGCCGCGCCCTCGCGCGCATGGCGGAAGGCTAG
Upstream 100 bases:
>100_bases GCGATGACGGCGGTGGAGGTCTCGGCGCTGATCGAGGACCGTGCCAAGGTCGAGATCGAAGTCACGGCCGTGGTGCCGGA CTGATGCGCGGGTGGCCCCG
Downstream 100 bases:
>100_bases GGAAGAGAGCAGCCGCTCAGAGCCGGCGCAGCCGCTGCAGCGCCTCGCGCAGCGTCTCGTCGCGCTTGGCGAAGCAGAAG CGCACCACGCGCTGATCGAA
Product: putative esterase
Products: NA
Alternate protein names: Esterase/Lipase/Thioesterase; Esterase/Lipase/Thioesterase Family Protein; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase Domain-Containing Protein; Lipase; Arylformamidase; Alpha/Beta Hydrolase Fold-3 Domain Protein; Esterase/Lipase; N-Acetylanthranilate Amidase; Lipase/Esterase; Carboxylesterase; Carboxylesterase Family Protein; Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase; Esterase/Lipase/Thiestherase Protein; Aylformamidase; Alpha/Beta Hydrolase Fold; Conserved Domain Protein; Alpha/Beta Hydrolase Protein; Para-Nitrobenzyl Esterase
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MAMVFPHGFANQQDIDDAYDPLKRAHDAAASNRHFAERSEAARRALPYRPAVPYGPTRAETLDIFPAGRPGAPVFFFIHG GYWRARSARDFSCVAQGPHALGFTTVVVDYALCPAVTIDEIVRQVRAAAAWTVRRIGEHGGDPARIVVGGHSAGGHLGAM LLCTPWEQDYGLPADPFAGAVLVSGLYDIAPLRYSYLQPAIQLDEGTVRRNSPVLHARPSATPVTLCWGGAEQEAFARQS QGFHAAWRAAGNAAELHPMPGADHFDAVQAFEDPASLPCRALARMAEG
Sequences:
>Translated_288_residues MAMVFPHGFANQQDIDDAYDPLKRAHDAAASNRHFAERSEAARRALPYRPAVPYGPTRAETLDIFPAGRPGAPVFFFIHG GYWRARSARDFSCVAQGPHALGFTTVVVDYALCPAVTIDEIVRQVRAAAAWTVRRIGEHGGDPARIVVGGHSAGGHLGAM LLCTPWEQDYGLPADPFAGAVLVSGLYDIAPLRYSYLQPAIQLDEGTVRRNSPVLHARPSATPVTLCWGGAEQEAFARQS QGFHAAWRAAGNAAELHPMPGADHFDAVQAFEDPASLPCRALARMAEG >Mature_287_residues AMVFPHGFANQQDIDDAYDPLKRAHDAAASNRHFAERSEAARRALPYRPAVPYGPTRAETLDIFPAGRPGAPVFFFIHGG YWRARSARDFSCVAQGPHALGFTTVVVDYALCPAVTIDEIVRQVRAAAAWTVRRIGEHGGDPARIVVGGHSAGGHLGAML LCTPWEQDYGLPADPFAGAVLVSGLYDIAPLRYSYLQPAIQLDEGTVRRNSPVLHARPSATPVTLCWGGAEQEAFARQSQ GFHAAWRAAGNAAELHPMPGADHFDAVQAFEDPASLPCRALARMAEG
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI192807282, Length=254, Percent_Identity=31.496062992126, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI224465228, Length=264, Percent_Identity=31.8181818181818, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI19920830, Length=282, Percent_Identity=25.886524822695, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31004; Mature: 30873
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMVFPHGFANQQDIDDAYDPLKRAHDAAASNRHFAERSEAARRALPYRPAVPYGPTRAE CCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC TLDIFPAGRPGAPVFFFIHGGYWRARSARDFSCVAQGPHALGFTTVVVDYALCPAVTIDE EEEEEECCCCCCCEEEEEECCEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHH IVRQVRAAAAWTVRRIGEHGGDPARIVVGGHSAGGHLGAMLLCTPWEQDYGLPADPFAGA HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHH VLVSGLYDIAPLRYSYLQPAIQLDEGTVRRNSPVLHARPSATPVTLCWGGAEQEAFARQS HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHC QGFHAAWRAAGNAAELHPMPGADHFDAVQAFEDPASLPCRALARMAEG CCHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure AMVFPHGFANQQDIDDAYDPLKRAHDAAASNRHFAERSEAARRALPYRPAVPYGPTRAE CEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC TLDIFPAGRPGAPVFFFIHGGYWRARSARDFSCVAQGPHALGFTTVVVDYALCPAVTIDE EEEEEECCCCCCCEEEEEECCEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCHHH IVRQVRAAAAWTVRRIGEHGGDPARIVVGGHSAGGHLGAMLLCTPWEQDYGLPADPFAGA HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHH VLVSGLYDIAPLRYSYLQPAIQLDEGTVRRNSPVLHARPSATPVTLCWGGAEQEAFARQS HHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHC QGFHAAWRAAGNAAELHPMPGADHFDAVQAFEDPASLPCRALARMAEG CCHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA