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The map label for this gene is ydiS [C]

Identifier: 120611799

GI number: 120611799

Start: 3464197

End: 3465903

Strand: Direct

Name: ydiS [C]

Synonym: Aave_3139

Alternate gene names: 120611799

Gene position: 3464197-3465903 (Clockwise)

Preceding gene: 120611795

Following gene: 120611800

Centisome position: 64.72

GC content: 66.61

Gene sequence:

>1707_bases
ATGACGAAAGACGAAATCCTTGCCCAGTACGGTCCGCGAGAGGCCATGGAATACGACGTGGTCGTGGTCGGCGGCGGCCC
GGCCGGGCTCTCCGCGGCCATCCGGCTCAAGCAGATGGCCGCCACGAACGGGCAGGACGTGTCGGTGGTGGTGCTCGAAA
AGGGCTCCGAGCCCGGCGCGCACATCCTCTCGGGCGCCATCATGGATCCGCGCGCGCTCACCGAGCTGATCCCCGACTGG
AAGGAGCGCGGCGCGCCCCTGAAGCAGCCGGTGACGGAAGACGCCATGATCTTCCTGGGCGAGAAATCGTCCTGGCGCAC
CCCCAACTTCCTGCAGCCCGGCTGCTTCCAGAACCATGGCAACTACATCGTCAGCCTGGGCAACGTGGTGCGCTGGCTCG
CCGCGCAGGCCGAGGAACTGGGCGTGGAGATCTTCCCGGGCTTCCCCGCGGCCGAAGTGCTCTACAACGAGGACGGCTCC
GTCAAGGGCGTGGCCACCGGCAACATGGGCGTCGGCAAGGACGGCGAACCCACGGGCGACTTCCAGCTGGGCATGGAGCT
GCACGCCAAGTACACCCTGTTCGCCGAAGGCTCGCGCGGGCACCTGGGCAAGCAGATCATCGCCCGCTACAAGCTCGACG
AGGGCCGCGATCCGCAGACCTACGGCATCGGCGTGAAGGAGCTGTGGGAAATCGACCCCAAGGTGCACCAGCCCGGCTTC
GTGATGCACACCGCCGGCTGGCCCATGGATGCCGACACCTACGGCGGCGCCTTCCTCTACCACGCGGAGGACAACAAGGT
CACGCTGGGCTTCATCACCGGGCTGGACTATTCCAATCCCTACCTGAGCCCCTTCGAGGAATTCCAGCGCTGGAAGACCC
ACCCCAACATCCGCTACTACCTGGAAGGCGACGAGGCCAAGGGCATCAAGCCGGCCAAGCGCATCGGCTACGGCGCGCGC
GCCATCACGGCGGGCGGCCTGCTGTCGCTGCCCAAGTTCGTGTTCCCCGGCGGGGCGCTGGTGGGCTGCGACGCGGGCTT
CCTGAACGTGAGCCGCATCAAGGGCAGCCATGCGGCCATCAAGACCGGCATGCTGGCCGCCGAGGCCGCCTACGACGCGA
TCCGCGCCGGCCGCCAGCACGACGAACTCACGGCCTATCCGCAGGCCTTCGAGAACAGCTGGCTGCACGAAGAGCTCAAC
AAGGCGCGCAACTTCAAGGCGTGGTTCAAGAAGGGCCTGGTCACGGCCACGCTGATGAACGGCATCGAGCAGTTCGTGCT
CAAGGGCAACATCCCCTGGACGCTGCACCGCGACAAGCCCGACCACGCCTACCTGAAGCCGGCGGCCGAGTGCAAGCCCA
TCGTCTATCCCAAGCCCGACGGCAAGCTCACCTTCGACCGCCTCTCCAGCGTGTTCATCAGCAACACCAACCATGCGGAG
AACCAGCCGGCCCACCTCACGCTCAAGGACCCGGGCGTGCCGGTGAACATCAACCTGGCGAAATACGCCGGCCCCGAGGC
CCGCTACTGCCCCGCGGCGGTGTACGAGTTCGTGCCCGACGAGGCGCAGGGCGGCAATGCGCAGCGGCTGCAGATCAACG
CGCAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGACGCAGAACATCGTGTGGGTCACGCCCGAAGGCGGC
GGCGGACCGAACTACTCGGGTATGTAA

Upstream 100 bases:

>100_bases
GCGCCCCGGGTGCATACAATGGACCGCACAGCGCCCGCGCGGGGCCCCACGCCCTGGACGCGACATCGTTCGATTATCAA
ATGCCGAGACGAGACAACCC

Downstream 100 bases:

>100_bases
GGCGCAGGGCCCCGGGGAGCGGCGGCGGCAGCCGCCGCTCCGACCCGCCCGTTGGCCTCCGGCCTACAGGGTGGGCCGGT
TCCGCGGGCCAGACTCGCGG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MTKDEILAQYGPREAMEYDVVVVGGGPAGLSAAIRLKQMAATNGQDVSVVVLEKGSEPGAHILSGAIMDPRALTELIPDW
KERGAPLKQPVTEDAMIFLGEKSSWRTPNFLQPGCFQNHGNYIVSLGNVVRWLAAQAEELGVEIFPGFPAAEVLYNEDGS
VKGVATGNMGVGKDGEPTGDFQLGMELHAKYTLFAEGSRGHLGKQIIARYKLDEGRDPQTYGIGVKELWEIDPKVHQPGF
VMHTAGWPMDADTYGGAFLYHAEDNKVTLGFITGLDYSNPYLSPFEEFQRWKTHPNIRYYLEGDEAKGIKPAKRIGYGAR
AITAGGLLSLPKFVFPGGALVGCDAGFLNVSRIKGSHAAIKTGMLAAEAAYDAIRAGRQHDELTAYPQAFENSWLHEELN
KARNFKAWFKKGLVTATLMNGIEQFVLKGNIPWTLHRDKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHAE
NQPAHLTLKDPGVPVNINLAKYAGPEARYCPAAVYEFVPDEAQGGNAQRLQINAQNCVHCKTCDIKDPTQNIVWVTPEGG
GGPNYSGM

Sequences:

>Translated_568_residues
MTKDEILAQYGPREAMEYDVVVVGGGPAGLSAAIRLKQMAATNGQDVSVVVLEKGSEPGAHILSGAIMDPRALTELIPDW
KERGAPLKQPVTEDAMIFLGEKSSWRTPNFLQPGCFQNHGNYIVSLGNVVRWLAAQAEELGVEIFPGFPAAEVLYNEDGS
VKGVATGNMGVGKDGEPTGDFQLGMELHAKYTLFAEGSRGHLGKQIIARYKLDEGRDPQTYGIGVKELWEIDPKVHQPGF
VMHTAGWPMDADTYGGAFLYHAEDNKVTLGFITGLDYSNPYLSPFEEFQRWKTHPNIRYYLEGDEAKGIKPAKRIGYGAR
AITAGGLLSLPKFVFPGGALVGCDAGFLNVSRIKGSHAAIKTGMLAAEAAYDAIRAGRQHDELTAYPQAFENSWLHEELN
KARNFKAWFKKGLVTATLMNGIEQFVLKGNIPWTLHRDKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHAE
NQPAHLTLKDPGVPVNINLAKYAGPEARYCPAAVYEFVPDEAQGGNAQRLQINAQNCVHCKTCDIKDPTQNIVWVTPEGG
GGPNYSGM
>Mature_567_residues
TKDEILAQYGPREAMEYDVVVVGGGPAGLSAAIRLKQMAATNGQDVSVVVLEKGSEPGAHILSGAIMDPRALTELIPDWK
ERGAPLKQPVTEDAMIFLGEKSSWRTPNFLQPGCFQNHGNYIVSLGNVVRWLAAQAEELGVEIFPGFPAAEVLYNEDGSV
KGVATGNMGVGKDGEPTGDFQLGMELHAKYTLFAEGSRGHLGKQIIARYKLDEGRDPQTYGIGVKELWEIDPKVHQPGFV
MHTAGWPMDADTYGGAFLYHAEDNKVTLGFITGLDYSNPYLSPFEEFQRWKTHPNIRYYLEGDEAKGIKPAKRIGYGARA
ITAGGLLSLPKFVFPGGALVGCDAGFLNVSRIKGSHAAIKTGMLAAEAAYDAIRAGRQHDELTAYPQAFENSWLHEELNK
ARNFKAWFKKGLVTATLMNGIEQFVLKGNIPWTLHRDKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHAEN
QPAHLTLKDPGVPVNINLAKYAGPEARYCPAAVYEFVPDEAQGGNAQRLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGG
GPNYSGM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=566, Percent_Identity=55.3003533568905, Blast_Score=626, Evalue=1e-179,
Organism=Escherichia coli, GI1787991, Length=413, Percent_Identity=28.8135593220339, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI87082155, Length=380, Percent_Identity=26.8421052631579, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1786227, Length=339, Percent_Identity=26.8436578171091, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI25144720, Length=565, Percent_Identity=55.0442477876106, Blast_Score=615, Evalue=1e-176,
Organism=Saccharomyces cerevisiae, GI6324932, Length=602, Percent_Identity=44.6843853820598, Blast_Score=481, Evalue=1e-137,
Organism=Drosophila melanogaster, GI24652256, Length=564, Percent_Identity=57.6241134751773, Blast_Score=638, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 61986; Mature: 61855

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKDEILAQYGPREAMEYDVVVVGGGPAGLSAAIRLKQMAATNGQDVSVVVLEKGSEPGA
CCHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCH
HILSGAIMDPRALTELIPDWKERGAPLKQPVTEDAMIFLGEKSSWRTPNFLQPGCFQNHG
HHHHCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
NYIVSLGNVVRWLAAQAEELGVEIFPGFPAAEVLYNEDGSVKGVATGNMGVGKDGEPTGD
CEEEEHHHHHHHHHHHHHHCCEEEECCCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCC
FQLGMELHAKYTLFAEGSRGHLGKQIIARYKLDEGRDPQTYGIGVKELWEIDPKVHQPGF
EEECEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCCCCCCE
VMHTAGWPMDADTYGGAFLYHAEDNKVTLGFITGLDYSNPYLSPFEEFQRWKTHPNIRYY
EEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEE
LEGDEAKGIKPAKRIGYGARAITAGGLLSLPKFVFPGGALVGCDAGFLNVSRIKGSHAAI
EECCCCCCCCHHHHHCCCCCEEECCCHHHCCHHHCCCCCEEECCCCCEEHHHCCCCHHHH
KTGMLAAEAAYDAIRAGRQHDELTAYPQAFENSWLHEELNKARNFKAWFKKGLVTATLMN
HHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCCHHHHHHHHHHCHHHHHHCCHHHHHHHH
GIEQFVLKGNIPWTLHRDKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHAE
HHHHHHCCCCCCEEEECCCCCCCCCCCHHCCCCEEEECCCCCEEHHHHHHHEEECCCCCC
NQPAHLTLKDPGVPVNINLAKYAGPEARYCPAAVYEFVPDEAQGGNAQRLQINAQNCVHC
CCCCEEEECCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEE
KTCDIKDPTQNIVWVTPEGGGGPNYSGM
EECCCCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TKDEILAQYGPREAMEYDVVVVGGGPAGLSAAIRLKQMAATNGQDVSVVVLEKGSEPGA
CHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCH
HILSGAIMDPRALTELIPDWKERGAPLKQPVTEDAMIFLGEKSSWRTPNFLQPGCFQNHG
HHHHCCCCCHHHHHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
NYIVSLGNVVRWLAAQAEELGVEIFPGFPAAEVLYNEDGSVKGVATGNMGVGKDGEPTGD
CEEEEHHHHHHHHHHHHHHCCEEEECCCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCC
FQLGMELHAKYTLFAEGSRGHLGKQIIARYKLDEGRDPQTYGIGVKELWEIDPKVHQPGF
EEECEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCCCCCCE
VMHTAGWPMDADTYGGAFLYHAEDNKVTLGFITGLDYSNPYLSPFEEFQRWKTHPNIRYY
EEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEE
LEGDEAKGIKPAKRIGYGARAITAGGLLSLPKFVFPGGALVGCDAGFLNVSRIKGSHAAI
EECCCCCCCCHHHHHCCCCCEEECCCHHHCCHHHCCCCCEEECCCCCEEHHHCCCCHHHH
KTGMLAAEAAYDAIRAGRQHDELTAYPQAFENSWLHEELNKARNFKAWFKKGLVTATLMN
HHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCCHHHHHHHHHHCHHHHHHCCHHHHHHHH
GIEQFVLKGNIPWTLHRDKPDHAYLKPAAECKPIVYPKPDGKLTFDRLSSVFISNTNHAE
HHHHHHCCCCCCEEEECCCCCCCCCCCHHCCCCEEEECCCCCEEHHHHHHHEEECCCCCC
NQPAHLTLKDPGVPVNINLAKYAGPEARYCPAAVYEFVPDEAQGGNAQRLQINAQNCVHC
CCCCEEEECCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEE
KTCDIKDPTQNIVWVTPEGGGGPNYSGM
EECCCCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]