| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611795
Identifier: 120611795
GI number: 120611795
Start: 3459876
End: 3460778
Strand: Direct
Name: 120611795
Synonym: Aave_3135
Alternate gene names: NA
Gene position: 3459876-3460778 (Clockwise)
Preceding gene: 120611793
Following gene: 120611799
Centisome position: 64.64
GC content: 72.98
Gene sequence:
>903_bases ATGGACACCTCCGCAGCCCCTGCCCGCCCAGGACTCCAGCGCACTGCCGTGCTGCCGGTGCGCAAGCTCGCCGTGGACCT GGCGCGGGGCTTCCCGCGCCGCTGGCACGGCGGCGACGCCTTCCGCACCCAGTTCTTCAATGCGCTGTCGATGAGCTTCC CGGTGGGCGAACAGTTCTTCATCGACTCGGTGCGCGCCGCAGCCGGGCGGCTCGAAGCCGGCCGGCCCGACCACGACGCC CTGCGGGCGCTGGTGCGCGGCTTCGTCGGGCAGGAGGCCACGCACCGCCACATCCACGGCCTCTACAACGCCGAACTGGA GCGCCAGGGGCTGGACAACCAGTGGCAGGACCGGGCGCGGGCGCGCATCGCCCGCCTGCACGAGCGCACCGACAACCCGA TGCATGCGCTGGCCATCACCTGCGCGTATGAACACTTCACCGCCCTGCTGGCGGACGGCACGCTGCGCTACCCGCGCTGG CTGGAAGGCGCCGATCCGCAGATGCAGACCGTCTGGCGCTGGCACGCGGCGGAGGAAACCGAGCACCGCGCCGTGGCCTT CGCGCTCTACGAAGCCCTGGGCGGCCGCCACGACTGGCGGGTGCGCTGGTACCTCTACGCCGGCCTGGTGTTCATGGTGG ACACGATACGCCAGACCGTCGTGAACCTGCGCAGCGACGGCAGCCTGTGGCGGCCCGGTACGTGGCTGAGCGCGGTGCGC ATGTTCTGGGGCCGCGACGGCGTCGCCTGGCGCAGCATTCCGGCGCTGCTGCGCTACCTGCGGCGGGACTTCCACCCCGA TCGGGAGCATGCCGCGCCCGGGGCCGCGGAGCTGGCGCAAAGCTGGCTCGCCGCGAATGCCGACCGGCTGCGCACCGTGG GTGCCGCCGCCCGGGCCGCCTGA
Upstream 100 bases:
>100_bases GTTGAAAACTGAATAATGCTCAGAAATGCGCGATGCCGCAACCACGGCCGCGGCCCCGGCCGCGATCACGGGACGCGCGA TTTTTCCGAAAGGACCGACC
Downstream 100 bases:
>100_bases CAGGTTCAGCGTGTGGTGGCGAACTCGCCGCGCTGCAACTCGGCGACGCCGTTGCCCCGGGAGTCCCGGGCGCCGAGGTC CGCGCCCTTCGCGGCCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; FF Domain Protein; Conserved Protein UCP; Metal-Dependent Hydrolase-Like; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MDTSAAPARPGLQRTAVLPVRKLAVDLARGFPRRWHGGDAFRTQFFNALSMSFPVGEQFFIDSVRAAAGRLEAGRPDHDA LRALVRGFVGQEATHRHIHGLYNAELERQGLDNQWQDRARARIARLHERTDNPMHALAITCAYEHFTALLADGTLRYPRW LEGADPQMQTVWRWHAAEETEHRAVAFALYEALGGRHDWRVRWYLYAGLVFMVDTIRQTVVNLRSDGSLWRPGTWLSAVR MFWGRDGVAWRSIPALLRYLRRDFHPDREHAAPGAAELAQSWLAANADRLRTVGAAARAA
Sequences:
>Translated_300_residues MDTSAAPARPGLQRTAVLPVRKLAVDLARGFPRRWHGGDAFRTQFFNALSMSFPVGEQFFIDSVRAAAGRLEAGRPDHDA LRALVRGFVGQEATHRHIHGLYNAELERQGLDNQWQDRARARIARLHERTDNPMHALAITCAYEHFTALLADGTLRYPRW LEGADPQMQTVWRWHAAEETEHRAVAFALYEALGGRHDWRVRWYLYAGLVFMVDTIRQTVVNLRSDGSLWRPGTWLSAVR MFWGRDGVAWRSIPALLRYLRRDFHPDREHAAPGAAELAQSWLAANADRLRTVGAAARAA >Mature_300_residues MDTSAAPARPGLQRTAVLPVRKLAVDLARGFPRRWHGGDAFRTQFFNALSMSFPVGEQFFIDSVRAAAGRLEAGRPDHDA LRALVRGFVGQEATHRHIHGLYNAELERQGLDNQWQDRARARIARLHERTDNPMHALAITCAYEHFTALLADGTLRYPRW LEGADPQMQTVWRWHAAEETEHRAVAFALYEALGGRHDWRVRWYLYAGLVFMVDTIRQTVVNLRSDGSLWRPGTWLSAVR MFWGRDGVAWRSIPALLRYLRRDFHPDREHAAPGAAELAQSWLAANADRLRTVGAAARAA
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34062; Mature: 34062
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSAAPARPGLQRTAVLPVRKLAVDLARGFPRRWHGGDAFRTQFFNALSMSFPVGEQFF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH IDSVRAAAGRLEAGRPDHDALRALVRGFVGQEATHRHIHGLYNAELERQGLDNQWQDRAR HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ARIARLHERTDNPMHALAITCAYEHFTALLADGTLRYPRWLEGADPQMQTVWRWHAAEET HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCH EHRAVAFALYEALGGRHDWRVRWYLYAGLVFMVDTIRQTVVNLRSDGSLWRPGTWLSAVR HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH MFWGRDGVAWRSIPALLRYLRRDFHPDREHAAPGAAELAQSWLAANADRLRTVGAAARAA HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MDTSAAPARPGLQRTAVLPVRKLAVDLARGFPRRWHGGDAFRTQFFNALSMSFPVGEQFF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH IDSVRAAAGRLEAGRPDHDALRALVRGFVGQEATHRHIHGLYNAELERQGLDNQWQDRAR HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ARIARLHERTDNPMHALAITCAYEHFTALLADGTLRYPRWLEGADPQMQTVWRWHAAEET HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCH EHRAVAFALYEALGGRHDWRVRWYLYAGLVFMVDTIRQTVVNLRSDGSLWRPGTWLSAVR HHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH MFWGRDGVAWRSIPALLRYLRRDFHPDREHAAPGAAELAQSWLAANADRLRTVGAAARAA HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA