| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611738
Identifier: 120611738
GI number: 120611738
Start: 3390717
End: 3391802
Strand: Direct
Name: 120611738
Synonym: Aave_3076
Alternate gene names: NA
Gene position: 3390717-3391802 (Clockwise)
Preceding gene: 120611737
Following gene: 120611739
Centisome position: 63.35
GC content: 69.24
Gene sequence:
>1086_bases ATGCCCTCTTACGAACACTTCACCGGCACCCGCCCCGTTTCCGAGCAGCATGCATTCGACACGGATGCCCTCTCGGCCTG GATGGCGGAGCATGTGGAAGGCTTCGAGGGCCCGCTGGCGGTGGAGATGTTCAAGGGCGGGCAGTCCAACCCCACCTTCA AGCTGAACACGCCGTCGCGCAGCTACGTGATGCGGGCCAAGCCCGGGCCGGTGGCCAGGCTGCTGCCCTCCGCCCATGCG GTGGAGCGCGAGTTCCAGGTGATGGGCGGGCTGGCCGGCACCGGCGTGCCGGTGCCGCGCATGTACGCGCTGTGCGAGGA CGAATCCGTGATCGGGCGCGCGTTCTACATCATGGAGTTCCTGCAGGGCCGCGTGATGTGGGACCAGGCCCTGCCGGACA TGGACCCTGCCGCGCGCGGGGCCATCTACGACGAGATGAACCGCGTGATCGCGGCACTGCACACCGTGCCCTTCGCCGAG CGCGGCCTCGCGGGCTACGGCAAGCCGGGCAACTACTTCGAGCGCCAGATCGGCCGCTGGAGCAAGCAGTACGTGGCCTC CATCACGCAGCCCATCGAGGCCATGGACCGGCTCATGGAATGGCTGCCCGCCCACATGCCCGCGAGCGCGCGCGACGAAA GCCGCGTCTCCATCGTGCACGGCGACTTCCGGCTCGACAACCTGATGTTCCACCCCACCGAGCCGCGCGTGATCGCCGTG CTCGACTGGGAGCTTTCCACCCTCGGGCATCCGCTCGCGGATTTCAGCTACCACTGCATGGCATGGCACATCCCGCCCGG CATGTTCCGCGGCATCGGCGGCCTGGACCACGCCGCGCTGGGCATCCCCACCGAAGACGAGTACATCCGCCGCTACTGCG AGCGCACCGGCTTCGGCACGCCCGAGGCGCTGCGCGCGGACTGGAACTTCTACCTCGCCTACAACCTGTTCCGCCTCGCC TCCATCCTGCAGGGCATCGCCAAGCGCGTGGAGGACGGCACCGCGTCCAGCGCGCAGGCGCGCGCCTCTGGCGAAGGCGC CCGGCCCCTGGCCGAGATGGCCTGGGGCTTCGCGCAGCGCATGTAG
Upstream 100 bases:
>100_bases GTCGTGCGCGACCGTGACGTCCTGATGCGCATCGCCGAAGCCGACCACTGACGCCGACCTCCCTGCCGCCCACGCACCAC CTGCCACGGAACCACCGCCC
Downstream 100 bases:
>100_bases GCGCCGGCAGGCCCGTTCCGCAGCCCTCTTTCCGCGCACCCGCGCGGCCCGATTTCAACCGGAGACACCGCGATGGATTT CGACTACTCCCCCAAGACCA
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MPSYEHFTGTRPVSEQHAFDTDALSAWMAEHVEGFEGPLAVEMFKGGQSNPTFKLNTPSRSYVMRAKPGPVARLLPSAHA VEREFQVMGGLAGTGVPVPRMYALCEDESVIGRAFYIMEFLQGRVMWDQALPDMDPAARGAIYDEMNRVIAALHTVPFAE RGLAGYGKPGNYFERQIGRWSKQYVASITQPIEAMDRLMEWLPAHMPASARDESRVSIVHGDFRLDNLMFHPTEPRVIAV LDWELSTLGHPLADFSYHCMAWHIPPGMFRGIGGLDHAALGIPTEDEYIRRYCERTGFGTPEALRADWNFYLAYNLFRLA SILQGIAKRVEDGTASSAQARASGEGARPLAEMAWGFAQRM
Sequences:
>Translated_361_residues MPSYEHFTGTRPVSEQHAFDTDALSAWMAEHVEGFEGPLAVEMFKGGQSNPTFKLNTPSRSYVMRAKPGPVARLLPSAHA VEREFQVMGGLAGTGVPVPRMYALCEDESVIGRAFYIMEFLQGRVMWDQALPDMDPAARGAIYDEMNRVIAALHTVPFAE RGLAGYGKPGNYFERQIGRWSKQYVASITQPIEAMDRLMEWLPAHMPASARDESRVSIVHGDFRLDNLMFHPTEPRVIAV LDWELSTLGHPLADFSYHCMAWHIPPGMFRGIGGLDHAALGIPTEDEYIRRYCERTGFGTPEALRADWNFYLAYNLFRLA SILQGIAKRVEDGTASSAQARASGEGARPLAEMAWGFAQRM >Mature_360_residues PSYEHFTGTRPVSEQHAFDTDALSAWMAEHVEGFEGPLAVEMFKGGQSNPTFKLNTPSRSYVMRAKPGPVARLLPSAHAV EREFQVMGGLAGTGVPVPRMYALCEDESVIGRAFYIMEFLQGRVMWDQALPDMDPAARGAIYDEMNRVIAALHTVPFAER GLAGYGKPGNYFERQIGRWSKQYVASITQPIEAMDRLMEWLPAHMPASARDESRVSIVHGDFRLDNLMFHPTEPRVIAVL DWELSTLGHPLADFSYHCMAWHIPPGMFRGIGGLDHAALGIPTEDEYIRRYCERTGFGTPEALRADWNFYLAYNLFRLAS ILQGIAKRVEDGTASSAQARASGEGARPLAEMAWGFAQRM
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=356, Percent_Identity=47.4719101123596, Blast_Score=332, Evalue=3e-91, Organism=Homo sapiens, GI211971008, Length=356, Percent_Identity=47.4719101123596, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI38505218, Length=360, Percent_Identity=40, Blast_Score=272, Evalue=3e-73, Organism=Caenorhabditis elegans, GI17562446, Length=320, Percent_Identity=38.125, Blast_Score=220, Evalue=7e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40275; Mature: 40144
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSYEHFTGTRPVSEQHAFDTDALSAWMAEHVEGFEGPLAVEMFKGGQSNPTFKLNTPSR CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCC SYVMRAKPGPVARLLPSAHAVEREFQVMGGLAGTGVPVPRMYALCEDESVIGRAFYIMEF CEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH LQGRVMWDQALPDMDPAARGAIYDEMNRVIAALHTVPFAERGLAGYGKPGNYFERQIGRW HHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH SKQYVASITQPIEAMDRLMEWLPAHMPASARDESRVSIVHGDFRLDNLMFHPTEPRVIAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCEEECCCCCCEEEE LDWELSTLGHPLADFSYHCMAWHIPPGMFRGIGGLDHAALGIPTEDEYIRRYCERTGFGT EECCHHHHCCCHHCCCCEEEEEECCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCC PEALRADWNFYLAYNLFRLASILQGIAKRVEDGTASSAQARASGEGARPLAEMAWGFAQR CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHC M C >Mature Secondary Structure PSYEHFTGTRPVSEQHAFDTDALSAWMAEHVEGFEGPLAVEMFKGGQSNPTFKLNTPSR CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCC SYVMRAKPGPVARLLPSAHAVEREFQVMGGLAGTGVPVPRMYALCEDESVIGRAFYIMEF CEEEECCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH LQGRVMWDQALPDMDPAARGAIYDEMNRVIAALHTVPFAERGLAGYGKPGNYFERQIGRW HHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH SKQYVASITQPIEAMDRLMEWLPAHMPASARDESRVSIVHGDFRLDNLMFHPTEPRVIAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCEEECCCCCCEEEE LDWELSTLGHPLADFSYHCMAWHIPPGMFRGIGGLDHAALGIPTEDEYIRRYCERTGFGT EECCHHHHCCCHHCCCCEEEEEECCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCC PEALRADWNFYLAYNLFRLASILQGIAKRVEDGTASSAQARASGEGARPLAEMAWGFAQR CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHC M C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA