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The map label for this gene is yngJ [H]

Identifier: 120611739

GI number: 120611739

Start: 3391875

End: 3393149

Strand: Direct

Name: yngJ [H]

Synonym: Aave_3077

Alternate gene names: 120611739

Gene position: 3391875-3393149 (Clockwise)

Preceding gene: 120611738

Following gene: 120611746

Centisome position: 63.37

GC content: 68.94

Gene sequence:

>1275_bases
ATGGATTTCGACTACTCCCCCAAGACCAAGGACCTGCAGGCGCGCCTGCTGAAGTTCATGGACGAGCACATCTACCCGTC
CGAAGCCGCCTACACCGCGGAACTGGCGGCCAACACGGCCGCGGGCCGGCGCTGGACGGCGCTCGACACCATCGAGAAGC
TGAAACCCAAAGCCCGCGCGGCCGGCCTCTGGAACCTGTTCCTGCCGGTGGATTCCGCCGCGGCCTCGGGCTATGAAGGC
GCCGGGCTCACCAACCAGGAATACGCACCGCTCGCCGAGATCATGGGCCGCGTGCCCTGGGCCAGCGAAGTGTTCAACTG
CTCCGCGCCCGACACGGGCAATATGGAAACCATCGCCCGCTACGGCAGCGAGGAGAACAAGGCCCGCTGGCTGCGCCCGC
TGCTGGAAGGCGAGATCCGCTCGGCGTTCGCGATGACCGAACCCGACGTGGCCTCCAGCGATGCGACCAACATCTCCACC
CGCATCGAGCGCCAGGGCGACGAGTACGTCATCAACGGCCGCAAGTGGTGGATCTCCGGCGCGGCCGACCCGCGCTGCAA
GGTCTTCATCACCATGGGCAAGAGCGATCCCGAGGCACCCAGGCACTCGCAGCAGAGCATGGTCCTGGTGCCCGCGGACA
CGCCCGGCATCCGCATCCTGCGCCCGCTCAACGTGCTGGGCTACGACGACGCGCCCCACGGCCACGTCGAGATGGTGTTC
GAGAACGTGCGCGTGCCGGCCAGCAACATCCTGCTGGGCGAAGGCCGCGGCTTCGAGATCGCCCAGGGGCGCCTGGGCCC
CGGCCGCATCCACCACTGCATGCGCCTGATCGGCCTGGCCGAGCGCGCACTGGAGCTGATGTGCCGCCGCGCGTCCTCGC
GCGTCGCCTTCGGCAAGACCGTGGCCCAGCAGACCGTGACGCAGGAGCGCATCGCCGAGGCCCGCTGCAAGATCGACATG
GCCCGCCTGCTCACGCTCAAGGCCGCCTGGCTCATGGACGTGGCCGGCAACAAGGTCGCCAAGACCGAGATCGCGATGAT
CAAGGTGGTGGCCCCCAGCATGGCCTGCCAGGTGATCGACTGGGCCATGCAGGTGCATGGCGGCGGCGGCATGTGCGACG
ACTTCCCGCTCGCCTATGCCTATGCCGGCGCGCGCACCCTGCGCTTCGCGGACGGCCCGGACGAGGTGCACCGCAACGCC
ATCGCGAAGTGGGAGCTGGGCAAGTACTCGGCCTATGGGCGGGGGGTCGAGGTGCCGGTCACGCGCGGCTGCTGA

Upstream 100 bases:

>100_bases
GGCCTGGGGCTTCGCGCAGCGCATGTAGGCGCCGGCAGGCCCGTTCCGCAGCCCTCTTTCCGCGCACCCGCGCGGCCCGA
TTTCAACCGGAGACACCGCG

Downstream 100 bases:

>100_bases
GTTGCCGCGGGGGATGACCGCGCCCCCCGCGCCCGCGGGAAGCGCACCGCAGCGTCAAGGCAGCAGCGTCAGTGCGTGCG
ACCACCGCTCCGGCCGCAAT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MDFDYSPKTKDLQARLLKFMDEHIYPSEAAYTAELAANTAAGRRWTALDTIEKLKPKARAAGLWNLFLPVDSAAASGYEG
AGLTNQEYAPLAEIMGRVPWASEVFNCSAPDTGNMETIARYGSEENKARWLRPLLEGEIRSAFAMTEPDVASSDATNIST
RIERQGDEYVINGRKWWISGAADPRCKVFITMGKSDPEAPRHSQQSMVLVPADTPGIRILRPLNVLGYDDAPHGHVEMVF
ENVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCRRASSRVAFGKTVAQQTVTQERIAEARCKIDM
ARLLTLKAAWLMDVAGNKVAKTEIAMIKVVAPSMACQVIDWAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNA
IAKWELGKYSAYGRGVEVPVTRGC

Sequences:

>Translated_424_residues
MDFDYSPKTKDLQARLLKFMDEHIYPSEAAYTAELAANTAAGRRWTALDTIEKLKPKARAAGLWNLFLPVDSAAASGYEG
AGLTNQEYAPLAEIMGRVPWASEVFNCSAPDTGNMETIARYGSEENKARWLRPLLEGEIRSAFAMTEPDVASSDATNIST
RIERQGDEYVINGRKWWISGAADPRCKVFITMGKSDPEAPRHSQQSMVLVPADTPGIRILRPLNVLGYDDAPHGHVEMVF
ENVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCRRASSRVAFGKTVAQQTVTQERIAEARCKIDM
ARLLTLKAAWLMDVAGNKVAKTEIAMIKVVAPSMACQVIDWAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNA
IAKWELGKYSAYGRGVEVPVTRGC
>Mature_424_residues
MDFDYSPKTKDLQARLLKFMDEHIYPSEAAYTAELAANTAAGRRWTALDTIEKLKPKARAAGLWNLFLPVDSAAASGYEG
AGLTNQEYAPLAEIMGRVPWASEVFNCSAPDTGNMETIARYGSEENKARWLRPLLEGEIRSAFAMTEPDVASSDATNIST
RIERQGDEYVINGRKWWISGAADPRCKVFITMGKSDPEAPRHSQQSMVLVPADTPGIRILRPLNVLGYDDAPHGHVEMVF
ENVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCRRASSRVAFGKTVAQQTVTQERIAEARCKIDM
ARLLTLKAAWLMDVAGNKVAKTEIAMIKVVAPSMACQVIDWAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNA
IAKWELGKYSAYGRGVEVPVTRGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI48976061, Length=401, Percent_Identity=60.3491271820449, Blast_Score=489, Evalue=1e-138,
Organism=Homo sapiens, GI211971008, Length=401, Percent_Identity=60.3491271820449, Blast_Score=489, Evalue=1e-138,
Organism=Homo sapiens, GI38505218, Length=406, Percent_Identity=53.9408866995074, Blast_Score=445, Evalue=1e-125,
Organism=Homo sapiens, GI4557231, Length=420, Percent_Identity=29.0476190476191, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI187960098, Length=420, Percent_Identity=29.0476190476191, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI4501859, Length=326, Percent_Identity=32.8220858895706, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI4557233, Length=359, Percent_Identity=32.3119777158774, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI21361497, Length=391, Percent_Identity=28.6445012787724, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI226958412, Length=399, Percent_Identity=25.31328320802, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI226958414, Length=327, Percent_Identity=27.5229357798165, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI7656849, Length=286, Percent_Identity=28.6713286713287, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4501857, Length=312, Percent_Identity=27.8846153846154, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI76496475, Length=331, Percent_Identity=27.4924471299094, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI4557235, Length=331, Percent_Identity=27.4924471299094, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI4503943, Length=335, Percent_Identity=23.8805970149254, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI7669494, Length=313, Percent_Identity=24.9201277955272, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081958, Length=302, Percent_Identity=30.794701986755, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI1786223, Length=297, Percent_Identity=25.5892255892256, Blast_Score=92, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562446, Length=365, Percent_Identity=56.7123287671233, Blast_Score=416, Evalue=1e-116,
Organism=Caenorhabditis elegans, GI17569725, Length=422, Percent_Identity=28.436018957346, Blast_Score=148, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17534899, Length=421, Percent_Identity=27.0783847980998, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17570075, Length=422, Percent_Identity=25.1184834123223, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17551932, Length=348, Percent_Identity=29.5977011494253, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=296, Percent_Identity=29.3918918918919, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17505929, Length=330, Percent_Identity=30, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17533517, Length=289, Percent_Identity=30.7958477508651, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17506239, Length=296, Percent_Identity=30.4054054054054, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=328, Percent_Identity=29.8780487804878, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=326, Percent_Identity=27.9141104294479, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71990804, Length=214, Percent_Identity=30.3738317757009, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=244, Percent_Identity=29.0983606557377, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=182, Percent_Identity=30.2197802197802, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534353, Length=328, Percent_Identity=24.6951219512195, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24646207, Length=335, Percent_Identity=34.3283582089552, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI21356377, Length=333, Percent_Identity=31.8318318318318, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24660351, Length=283, Percent_Identity=31.4487632508834, Blast_Score=135, Evalue=7e-32,
Organism=Drosophila melanogaster, GI24666513, Length=296, Percent_Identity=33.1081081081081, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI281363737, Length=331, Percent_Identity=29.0030211480363, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21355753, Length=295, Percent_Identity=26.7796610169492, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI19920834, Length=360, Percent_Identity=24.4444444444444, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46560; Mature: 46560

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDYSPKTKDLQARLLKFMDEHIYPSEAAYTAELAANTAAGRRWTALDTIEKLKPKARA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCHHHH
AGLWNLFLPVDSAAASGYEGAGLTNQEYAPLAEIMGRVPWASEVFNCSAPDTGNMETIAR
CCEEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHEECCCCCCCCHHHHHH
YGSEENKARWLRPLLEGEIRSAFAMTEPDVASSDATNISTRIERQGDEYVINGRKWWISG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEECCEEEEEEC
AADPRCKVFITMGKSDPEAPRHSQQSMVLVPADTPGIRILRPLNVLGYDDAPHGHVEMVF
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECEEECCCCCCCCHHHHHH
ENVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCRRASSRVAFGKT
HHCCCCHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAQQTVTQERIAEARCKIDMARLLTLKAAWLMDVAGNKVAKTEIAMIKVVAPSMACQVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCHHHHHHHH
WAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNAIAKWELGKYSAYGRGVEVPV
HHHHCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCC
TRGC
CCCC
>Mature Secondary Structure
MDFDYSPKTKDLQARLLKFMDEHIYPSEAAYTAELAANTAAGRRWTALDTIEKLKPKARA
CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCHHHH
AGLWNLFLPVDSAAASGYEGAGLTNQEYAPLAEIMGRVPWASEVFNCSAPDTGNMETIAR
CCEEEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHEECCCCCCCCHHHHHH
YGSEENKARWLRPLLEGEIRSAFAMTEPDVASSDATNISTRIERQGDEYVINGRKWWISG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEECCEEEEEEC
AADPRCKVFITMGKSDPEAPRHSQQSMVLVPADTPGIRILRPLNVLGYDDAPHGHVEMVF
CCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEECEEECCCCCCCCHHHHHH
ENVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCRRASSRVAFGKT
HHCCCCHHHEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VAQQTVTQERIAEARCKIDMARLLTLKAAWLMDVAGNKVAKTEIAMIKVVAPSMACQVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCHHHHHHHH
WAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNAIAKWELGKYSAYGRGVEVPV
HHHHCCCCCCCCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEECCC
TRGC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]