Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611731

Identifier: 120611731

GI number: 120611731

Start: 3383026

End: 3383223

Strand: Direct

Name: 120611731

Synonym: Aave_3069

Alternate gene names: NA

Gene position: 3383026-3383223 (Clockwise)

Preceding gene: 120611730

Following gene: 120611732

Centisome position: 63.2

GC content: 71.21

Gene sequence:

>198_bases
ATGAACGTCGTCATCAACCAGAAAGCCACCGAGCTGCCCGAGGGCGCCACCGTGGCCCATGCCATCGCGGCGATCGCCGC
CCGCCCGCCCTTCGCGGTGGCCGTCAACACCGTGTTCGTCCCCCAGGCCCGCCATGCCCAGCATGCGCTGCAGTCCGGCG
ACCGGGTCGAGATCATCGCGCCGGTGACGGGCGGCTGA

Upstream 100 bases:

>100_bases
CCATCCTGGACGTGGTGATGGAATGCCTGAACGAAGGACAATCACCCCTCGCCTCCCGCTTCGACCTGGCGCTGGACCTC
GAGTCCGCCGCCGCACTGCC

Downstream 100 bases:

>100_bases
CGCCCCTGCCCGGCAGCCTGCCGACGCAGGCCGCCCAGCCCTTCCCTTTCCGACATCCGCCATGCCCGACACCGCATCCG
ATGACGCCCTGGTCCTCTAC

Product: thiamine biosynthesis protein ThiS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNVVINQKATELPEGATVAHAIAAIAARPPFAVAVNTVFVPQARHAQHALQSGDRVEIIAPVTGG

Sequences:

>Translated_65_residues
MNVVINQKATELPEGATVAHAIAAIAARPPFAVAVNTVFVPQARHAQHALQSGDRVEIIAPVTGG
>Mature_65_residues
MNVVINQKATELPEGATVAHAIAAIAARPPFAVAVNTVFVPQARHAQHALQSGDRVEIIAPVTGG

Specific function: Unknown

COG id: COG2104

COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6694; Mature: 6694

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVINQKATELPEGATVAHAIAAIAARPPFAVAVNTVFVPQARHAQHALQSGDRVEIIA
CCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEEE
PVTGG
ECCCC
>Mature Secondary Structure
MNVVINQKATELPEGATVAHAIAAIAARPPFAVAVNTVFVPQARHAQHALQSGDRVEIIA
CCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCEEEEEE
PVTGG
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA