| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611727
Identifier: 120611727
GI number: 120611727
Start: 3375980
End: 3376777
Strand: Reverse
Name: 120611727
Synonym: Aave_3065
Alternate gene names: NA
Gene position: 3376777-3375980 (Counterclockwise)
Preceding gene: 120611728
Following gene: 120611726
Centisome position: 63.08
GC content: 66.54
Gene sequence:
>798_bases ATGAGTTCCATTCAGCAGCAGCCCGGCGATCCCTTGCTGGAATTCCGGCTGGCCTATCTGCGTGCCATCGCCAAGTCCTG GTACGAACCCGAATACCGCGACACCCTGCTCAGGCAAAAGGACATCCAGCCCCTGCTCGCCAAGGACTTCGGCATGACGA CCCAGTGGCCCTGGCTGGACGTGGCGCTCCTTCGCAGCGACAACCCGCTCGACCAGACCTTGTGGAAGCCCGAACTGACC GCCGGCTGGATCGGCCTGGACGATGCCTTCGAGATCGTCTTCCCCGAAGCGCCCGCCGACCGCGCCGCCGAGGCGCTGGC CAGCTATTACCAGCTGTTCCCCACGCTCATGGGCGCGACCGCCGACGCCCGCGACGAGGAGCACGTGCCGCCGGGCATGG TGGGCGGCGCGCTGCCCACGGGCCTGGGCATCCCGGGCGGGGACCCCGGCTCCCTGCTGGCCTTCGGCGGCGTGGTGCTG CGGGCCATCGCGCTCGCCTGGCAGTCGAAGGAGTTCCGCGACGAGCTGCTGAACCCCGGCTGTGCCGATGCGGCGCCGCT GTTGAGCCAATGGCTGGGCTACAACAACCCCTTCAACTTCTCCATCCGGTTCACGCCCAACAAGTCGCTGACCTGGGATG CCGGCAAGGGTTGCTGGAACCAGCTCAATCCGGACGGCAGCAAGATCAAGAACCGCATCGTGCTGAACTATCCCAACGCG CCCGAGGCCCGGGATTTCTGGCCGATCTCGCTCACGTCGTACAACAACACCGGCAGCGCCTATCCGTTCACCTGCTGA
Upstream 100 bases:
>100_bases CACTGCCAGCGACGAAGAGCGGCTGCAGTCCTTGCTGGGTATGCGACCCGGGCTCGGGGCATTCGTGTGTTGATCCGATG ATGATGAGGGGAGGATTCCA
Downstream 100 bases:
>100_bases GTGCCTGCCGTGCCACCTGAAGGGCCGGTCGGCCTCGCCGGGACCTGGGAGGCCCTGCGCGGCAGTTCCGCCACCCTGGC GCTCACCCTGAGCGCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSSIQQQPGDPLLEFRLAYLRAIAKSWYEPEYRDTLLRQKDIQPLLAKDFGMTTQWPWLDVALLRSDNPLDQTLWKPELT AGWIGLDDAFEIVFPEAPADRAAEALASYYQLFPTLMGATADARDEEHVPPGMVGGALPTGLGIPGGDPGSLLAFGGVVL RAIALAWQSKEFRDELLNPGCADAAPLLSQWLGYNNPFNFSIRFTPNKSLTWDAGKGCWNQLNPDGSKIKNRIVLNYPNA PEARDFWPISLTSYNNTGSAYPFTC
Sequences:
>Translated_265_residues MSSIQQQPGDPLLEFRLAYLRAIAKSWYEPEYRDTLLRQKDIQPLLAKDFGMTTQWPWLDVALLRSDNPLDQTLWKPELT AGWIGLDDAFEIVFPEAPADRAAEALASYYQLFPTLMGATADARDEEHVPPGMVGGALPTGLGIPGGDPGSLLAFGGVVL RAIALAWQSKEFRDELLNPGCADAAPLLSQWLGYNNPFNFSIRFTPNKSLTWDAGKGCWNQLNPDGSKIKNRIVLNYPNA PEARDFWPISLTSYNNTGSAYPFTC >Mature_264_residues SSIQQQPGDPLLEFRLAYLRAIAKSWYEPEYRDTLLRQKDIQPLLAKDFGMTTQWPWLDVALLRSDNPLDQTLWKPELTA GWIGLDDAFEIVFPEAPADRAAEALASYYQLFPTLMGATADARDEEHVPPGMVGGALPTGLGIPGGDPGSLLAFGGVVLR AIALAWQSKEFRDELLNPGCADAAPLLSQWLGYNNPFNFSIRFTPNKSLTWDAGKGCWNQLNPDGSKIKNRIVLNYPNAP EARDFWPISLTSYNNTGSAYPFTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29353; Mature: 29222
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIQQQPGDPLLEFRLAYLRAIAKSWYEPEYRDTLLRQKDIQPLLAKDFGMTTQWPWLD CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCE VALLRSDNPLDQTLWKPELTAGWIGLDDAFEIVFPEAPADRAAEALASYYQLFPTLMGAT EEEECCCCCHHHHHCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC ADARDEEHVPPGMVGGALPTGLGIPGGDPGSLLAFGGVVLRAIALAWQSKEFRDELLNPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC CADAAPLLSQWLGYNNPFNFSIRFTPNKSLTWDAGKGCWNQLNPDGSKIKNRIVLNYPNA CCHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHCCCCCHHHHCCEEEEECCCC PEARDFWPISLTSYNNTGSAYPFTC CCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure SSIQQQPGDPLLEFRLAYLRAIAKSWYEPEYRDTLLRQKDIQPLLAKDFGMTTQWPWLD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCE VALLRSDNPLDQTLWKPELTAGWIGLDDAFEIVFPEAPADRAAEALASYYQLFPTLMGAT EEEECCCCCHHHHHCCCCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC ADARDEEHVPPGMVGGALPTGLGIPGGDPGSLLAFGGVVLRAIALAWQSKEFRDELLNPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC CADAAPLLSQWLGYNNPFNFSIRFTPNKSLTWDAGKGCWNQLNPDGSKIKNRIVLNYPNA CCHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHCCCCCHHHHCCEEEEECCCC PEARDFWPISLTSYNNTGSAYPFTC CCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA