| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611721
Identifier: 120611721
GI number: 120611721
Start: 3369296
End: 3369634
Strand: Reverse
Name: 120611721
Synonym: Aave_3059
Alternate gene names: NA
Gene position: 3369634-3369296 (Counterclockwise)
Preceding gene: 120611722
Following gene: 120611713
Centisome position: 62.95
GC content: 66.67
Gene sequence:
>339_bases ATGCGATGCATCACCCTGTCTTCCGGAGCGCAAGCCCGCTCCAGGCGCGCGGCCGCGGGGGCACTCTGGCAGCCGCAGAC CCTGTGGGAGTCGTATTACCAGCACGTGATGGGCACCGCGCCCGAGCAAGGCTACCTGTCCGCCTTCTGGCGACACTACC ACGGCACCTGCGCCGAAATGCACGTGGATGGGGCCGATCTGCTGCGCTGGAGCAGCGAATGCGACTGCGTGCTGCACCGG CTGCCCTACACACCGTTGAGCGATTTCCTGCGCGAGCTCAAGACACTCTGCGCGCATGCCCACCGCGTGGGCGCTGCCTT GCAGGTGATCGCGGATTGA
Upstream 100 bases:
>100_bases TTTCGTCCACGGCGCAGGCACCGGCGAACGCCTGCGGGCCGGCGGGACCCGCGGGCAGGCCCACCGGGCAGGCGCCTGAA CCAGGGCGGGACAGTGCCAC
Downstream 100 bases:
>100_bases AACTGCGAGAACATGGCCGCCACGGCCAGGGAGGAGAAGCGAAACCGTCGCGATAACAAGAAGAAAGAAGCCGCGCCACT TCTGGGAGGGAGAGGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MRCITLSSGAQARSRRAAAGALWQPQTLWESYYQHVMGTAPEQGYLSAFWRHYHGTCAEMHVDGADLLRWSSECDCVLHR LPYTPLSDFLRELKTLCAHAHRVGAALQVIAD
Sequences:
>Translated_112_residues MRCITLSSGAQARSRRAAAGALWQPQTLWESYYQHVMGTAPEQGYLSAFWRHYHGTCAEMHVDGADLLRWSSECDCVLHR LPYTPLSDFLRELKTLCAHAHRVGAALQVIAD >Mature_112_residues MRCITLSSGAQARSRRAAAGALWQPQTLWESYYQHVMGTAPEQGYLSAFWRHYHGTCAEMHVDGADLLRWSSECDCVLHR LPYTPLSDFLRELKTLCAHAHRVGAALQVIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12616; Mature: 12616
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCITLSSGAQARSRRAAAGALWQPQTLWESYYQHVMGTAPEQGYLSAFWRHYHGTCAEM CEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH HVDGADLLRWSSECDCVLHRLPYTPLSDFLRELKTLCAHAHRVGAALQVIAD CCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRCITLSSGAQARSRRAAAGALWQPQTLWESYYQHVMGTAPEQGYLSAFWRHYHGTCAEM CEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHH HVDGADLLRWSSECDCVLHRLPYTPLSDFLRELKTLCAHAHRVGAALQVIAD CCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA