| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611722
Identifier: 120611722
GI number: 120611722
Start: 3369950
End: 3370912
Strand: Reverse
Name: 120611722
Synonym: Aave_3060
Alternate gene names: NA
Gene position: 3370912-3369950 (Counterclockwise)
Preceding gene: 120611723
Following gene: 120611721
Centisome position: 62.98
GC content: 70.51
Gene sequence:
>963_bases ATGGCGATTTTGCGCAACCTTTCGAGCGGCCGGAGCATCGTGCTCCGTCCCCTGCATACCTTCGGCCGGCACCCGGATTC GTGCAGGACGGTACTGCAGGAGGCCGATGTGTCCAAGCTCCATGCCATCGTGCGCTGGTCCGGCATGCGCTGGGAAGTCG CCGACCAGAGCCGCAACGGCACCCTGCTGGACAACGCCCGGATGCGGCCCGCGCACTGGCACGGCCTGGCGGAGGGCTCC GAAATCCGTTTCGGCGCGTCCGTCGCGGCCGTGTGGACCCTGGTCGATGCATCGCCGCCCAGGACCGGCCTCTGGCCGCT CGGGGGCGAACCCGTGCTGCGCGTGCTGGACACCCAGGAAAACCTGCTGCCCCATGCCTCCGAGGCCGAATCCAACGTGT TCCAGTCCGAAGGTCGGTGGTGGTGGGACCGCATGGACCAGGTGCAGCCGCTGCTGGACGGCCACATCGTCCAGGCGGGC GGCCAGCGCTGGGAGTTCGTGCTCTGCGAGGACCTGGGCGCCACCCAGGACGTGCCGCGCATGCCGCATGCCTCGGCGCT GCCGGCCCCGCTGTTCGACTTCGACGTGAGCCAGGACGAGGAGCACGTCTGCCTGGACATCCACCTGGGCGGCCAGTCGC TGTCTCTGGGCGAGCGCATCCACCACTACACCCTGCTCACGCTCGTGCGCCAGCGCCTGCAGGATGCCCGGCAGGACGTG CCCATGGCCAGCCAGGGCTGGCTGGCCATCGATGCGCTGGCCCGGATGCTGGGGGTCGATGTCCCGTACCTGAACATCCA GCTCTTCCGGGCGCGGCGGCAGATCCAGAATGCCCTGGGCGCGGCCGGCGAGACGGTGGCCGTGGTGGAACGCCGCCGCG GGGAAGTGCGGTTCGGCGACCATGCCTTCCGCATCCGCAAGAGCGGCCGGCTGGAGGGCGAGCGGCCGGCGGCAGCGGGG TGA
Upstream 100 bases:
>100_bases GTACCCGTGGCGATGGGATGGCGCGATGCCGCGCGGGACGAGGGCGACCTCAATCCCTGGCCCCTCTACGTCTGACCTGT AAGCGTTCCTGCGGAGCACG
Downstream 100 bases:
>100_bases CCGGCCGCGGTTTGTAATCGCATGTAATGGGTTGTTTCGCGGGTTTTCTCTAGATTACGGTCATCGCGCTGCGATAGCAG ACGCTATAAGCACTACACCG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; FHA Domain Protein; FHA-Domain-Containing Protein; Forkhead-Associated Protein; Fha Domain Containing Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAILRNLSSGRSIVLRPLHTFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVADQSRNGTLLDNARMRPAHWHGLAEGS EIRFGASVAAVWTLVDASPPRTGLWPLGGEPVLRVLDTQENLLPHASEAESNVFQSEGRWWWDRMDQVQPLLDGHIVQAG GQRWEFVLCEDLGATQDVPRMPHASALPAPLFDFDVSQDEEHVCLDIHLGGQSLSLGERIHHYTLLTLVRQRLQDARQDV PMASQGWLAIDALARMLGVDVPYLNIQLFRARRQIQNALGAAGETVAVVERRRGEVRFGDHAFRIRKSGRLEGERPAAAG
Sequences:
>Translated_320_residues MAILRNLSSGRSIVLRPLHTFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVADQSRNGTLLDNARMRPAHWHGLAEGS EIRFGASVAAVWTLVDASPPRTGLWPLGGEPVLRVLDTQENLLPHASEAESNVFQSEGRWWWDRMDQVQPLLDGHIVQAG GQRWEFVLCEDLGATQDVPRMPHASALPAPLFDFDVSQDEEHVCLDIHLGGQSLSLGERIHHYTLLTLVRQRLQDARQDV PMASQGWLAIDALARMLGVDVPYLNIQLFRARRQIQNALGAAGETVAVVERRRGEVRFGDHAFRIRKSGRLEGERPAAAG >Mature_319_residues AILRNLSSGRSIVLRPLHTFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVADQSRNGTLLDNARMRPAHWHGLAEGSE IRFGASVAAVWTLVDASPPRTGLWPLGGEPVLRVLDTQENLLPHASEAESNVFQSEGRWWWDRMDQVQPLLDGHIVQAGG QRWEFVLCEDLGATQDVPRMPHASALPAPLFDFDVSQDEEHVCLDIHLGGQSLSLGERIHHYTLLTLVRQRLQDARQDVP MASQGWLAIDALARMLGVDVPYLNIQLFRARRQIQNALGAAGETVAVVERRRGEVRFGDHAFRIRKSGRLEGERPAAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35757; Mature: 35626
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILRNLSSGRSIVLRPLHTFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVADQSRNG CCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCC TLLDNARMRPAHWHGLAEGSEIRFGASVAAVWTLVDASPPRTGLWPLGGEPVLRVLDTQE CEECCCCCCCHHHCCCCCCCCEEECCHHEEHEEEECCCCCCCCCCCCCCCHHHEEECCHH NLLPHASEAESNVFQSEGRWWWDRMDQVQPLLDGHIVQAGGQRWEFVLCEDLGATQDVPR HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCCC MPHASALPAPLFDFDVSQDEEHVCLDIHLGGQSLSLGERIHHYTLLTLVRQRLQDARQDV CCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PMASQGWLAIDALARMLGVDVPYLNIQLFRARRQIQNALGAAGETVAVVERRRGEVRFGD CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECC HAFRIRKSGRLEGERPAAAG HHEEEECCCCCCCCCCCCCC >Mature Secondary Structure AILRNLSSGRSIVLRPLHTFGRHPDSCRTVLQEADVSKLHAIVRWSGMRWEVADQSRNG CCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCC TLLDNARMRPAHWHGLAEGSEIRFGASVAAVWTLVDASPPRTGLWPLGGEPVLRVLDTQE CEECCCCCCCHHHCCCCCCCCEEECCHHEEHEEEECCCCCCCCCCCCCCCHHHEEECCHH NLLPHASEAESNVFQSEGRWWWDRMDQVQPLLDGHIVQAGGQRWEFVLCEDLGATQDVPR HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCCC MPHASALPAPLFDFDVSQDEEHVCLDIHLGGQSLSLGERIHHYTLLTLVRQRLQDARQDV CCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PMASQGWLAIDALARMLGVDVPYLNIQLFRARRQIQNALGAAGETVAVVERRRGEVRFGD CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECC HAFRIRKSGRLEGERPAAAG HHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA