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The map label for this gene is sir1 [H]

Identifier: 120611715

GI number: 120611715

Start: 3362677

End: 3364527

Strand: Direct

Name: sir1 [H]

Synonym: Aave_3053

Alternate gene names: 120611715

Gene position: 3362677-3364527 (Clockwise)

Preceding gene: 120611714

Following gene: 120611716

Centisome position: 62.82

GC content: 70.29

Gene sequence:

>1851_bases
ATGTACCAATACACAGAATTCGACCAACAGTTCATCCGCCTGCGCGCGGACCAGTACCGCGACCAGCTGGAGCGCTTCCA
GGCGGGCAAGCTCTCCGGCGACGAGTTCAAGCCGCTGCGCCTGCAGAACGGCTGGTACGTGCAGCGCTATGCGCCCATGC
TGCGCGTGGCCGTGCCCTACGGCGAACTCTCGAGCGGCCAGCTGCGCGTGCTGGCCCGCATCGCCCGCGAATACGACATC
CCCGAGCCGGCGCTGCTGGCCGAGGCCCAGGCCACGCAGGAAAAGCTCGGCGACATCCCGCTCGCCGACGGCCGCCGCAT
CGGCACGCGCCTGAAGTATGGCTACGGCCACTTCACCACGCGCACGAACGTGCAATACAACTGGATCCCGCTGGACAAGA
GCGCCGACGTGATGGACCTGCTGGCCTCCGTGCACATGCACGGCATCCAGACCAGCGGCAACTGCATCCGCAACATCACC
AGCGACGCGCTGGCCGGCATCGCCGCCGACGAGATCGCCGATCCGCGGCCTTTCGCCGAGATCCTGCGCCAGTGGAGCAC
GCTGCACCCCGAGTTCGCCTTCCTGCCGCGCAAGTTCAAGGTGTCGCTCAACGGCGCCCGCGAAGACCGCGCCGCGCTCG
GCTGGTACGACGTGGGCCTGCAGCTCGTGAAGAACGGGGCCGGCGAGCTGGGCTTCCAGGTGCGCGTGGGCGGCGGCATG
GGCCGCACGCCGGTCATCAGCCCGGTGGTGCGCGAGTTCCTGCCCTGGAACCAGCTCATGAACTACCTGGAGGCGGTGAT
CCGCGTCTACAACCGCTACGGTCGCCGCGACAACCTCTGGAAGGCGCGCATCAAGATCCTCGTGAAGTCCGAGGGCCAGA
CCTACGTGGACCAGGTGGAAGAGGAATTCCGCCAGATCGTCGAGGTGGAAGGCGGCCCCCACACCATCACGCAGGCCGAG
TACGACCGCGTGGCCGCCTGCTTCCACGACCCCGTGCCCGACCTGGGCGGCGCGGACGCCGAGAGCCAGACGCTCTCGCT
GCTGCGCGCGGCCGCCGAAGGCGACCAGGGCTTCGGCCGCTGGCTCACGCGCAACGTGCTGCCGCACCGCCATCCGCTGC
TGCGCGCCGTGGTGCTGTCGTTCAAGCGCGTCGGCCATGCGCCCGGCGACGCCACGGCCGACCAGATGGACGCGGCCGCC
GACCTGGCCGACCGCTACTCCTGCGGCGAGGCCCGCGTGACGCACGAGCAGAACCTGCTGCTGCCCTGGGTGCGCGCCGA
CCAGCTGCCCGCGCTCTACCAGGAAGCGCGCGCGCTGGGCCTGGCCCAGCCCAACATCGGCCTGCTGACCGACATGATCG
CCTGCCCCGGCGGCGACTTCTGCTCGCTCGCCAACGCGCGCTCGCTGCCCATCGCCGAAGCCATCACCGAGCGCTACCAG
GACCTGGACGAGCTGTGGGACCTGGGCGAGATCGACCTGCACATCAGCGGCTGCATCAACTCCTGCGGCCACCACCACAG
CGGCCACATCGGCATCCTGGGCGTGGACAAGGACGGCAAGGAGTGGTACCAGATCACGCTCGGCGGCGCCGACGGCACCG
ACCTGTCGGGCCCGGCCGTGCCCGGCAAGATCATCGGGCCGTCCTTCAGCGCGGCCGAGGTGCCCGGCGTGATCGAGGCG
CTGCTGGCCACCTACCGCGACCAGCGCCAGCCGCTGTCGCCCGAGGCCGCCGGCAGCGCCCGCGGCCAGAAGCACGAGCA
CTTCATCGACACCGTGCGCCGCGTCGGCATCGAGCCCTTCAAGGCCGCCGCCAACGCCGCGCGACATCCCGCCGAGAGCG
TGGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGGAGCGGTTCATCCGCTCGGCCCTTTCCGTGCTGCTCGCCTGGGCGGGCGCCAAACTGGTTCTGATCTGAGTGCGCCC
GCGAGGCGCGCAACCCCACC

Downstream 100 bases:

>100_bases
GCCCGAGCACCGCATTCCCACGAGAGACACCATGAAAATCATCGCCGCCCACGATCCGGCAGCCACCGAGCCGGGGCACC
ACGTGCTGGCCATGCCCAAC

Product: nitrite/sulfite reductase hemoprotein subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MYQYTEFDQQFIRLRADQYRDQLERFQAGKLSGDEFKPLRLQNGWYVQRYAPMLRVAVPYGELSSGQLRVLARIAREYDI
PEPALLAEAQATQEKLGDIPLADGRRIGTRLKYGYGHFTTRTNVQYNWIPLDKSADVMDLLASVHMHGIQTSGNCIRNIT
SDALAGIAADEIADPRPFAEILRQWSTLHPEFAFLPRKFKVSLNGAREDRAALGWYDVGLQLVKNGAGELGFQVRVGGGM
GRTPVISPVVREFLPWNQLMNYLEAVIRVYNRYGRRDNLWKARIKILVKSEGQTYVDQVEEEFRQIVEVEGGPHTITQAE
YDRVAACFHDPVPDLGGADAESQTLSLLRAAAEGDQGFGRWLTRNVLPHRHPLLRAVVLSFKRVGHAPGDATADQMDAAA
DLADRYSCGEARVTHEQNLLLPWVRADQLPALYQEARALGLAQPNIGLLTDMIACPGGDFCSLANARSLPIAEAITERYQ
DLDELWDLGEIDLHISGCINSCGHHHSGHIGILGVDKDGKEWYQITLGGADGTDLSGPAVPGKIIGPSFSAAEVPGVIEA
LLATYRDQRQPLSPEAAGSARGQKHEHFIDTVRRVGIEPFKAAANAARHPAESVAA

Sequences:

>Translated_616_residues
MYQYTEFDQQFIRLRADQYRDQLERFQAGKLSGDEFKPLRLQNGWYVQRYAPMLRVAVPYGELSSGQLRVLARIAREYDI
PEPALLAEAQATQEKLGDIPLADGRRIGTRLKYGYGHFTTRTNVQYNWIPLDKSADVMDLLASVHMHGIQTSGNCIRNIT
SDALAGIAADEIADPRPFAEILRQWSTLHPEFAFLPRKFKVSLNGAREDRAALGWYDVGLQLVKNGAGELGFQVRVGGGM
GRTPVISPVVREFLPWNQLMNYLEAVIRVYNRYGRRDNLWKARIKILVKSEGQTYVDQVEEEFRQIVEVEGGPHTITQAE
YDRVAACFHDPVPDLGGADAESQTLSLLRAAAEGDQGFGRWLTRNVLPHRHPLLRAVVLSFKRVGHAPGDATADQMDAAA
DLADRYSCGEARVTHEQNLLLPWVRADQLPALYQEARALGLAQPNIGLLTDMIACPGGDFCSLANARSLPIAEAITERYQ
DLDELWDLGEIDLHISGCINSCGHHHSGHIGILGVDKDGKEWYQITLGGADGTDLSGPAVPGKIIGPSFSAAEVPGVIEA
LLATYRDQRQPLSPEAAGSARGQKHEHFIDTVRRVGIEPFKAAANAARHPAESVAA
>Mature_616_residues
MYQYTEFDQQFIRLRADQYRDQLERFQAGKLSGDEFKPLRLQNGWYVQRYAPMLRVAVPYGELSSGQLRVLARIAREYDI
PEPALLAEAQATQEKLGDIPLADGRRIGTRLKYGYGHFTTRTNVQYNWIPLDKSADVMDLLASVHMHGIQTSGNCIRNIT
SDALAGIAADEIADPRPFAEILRQWSTLHPEFAFLPRKFKVSLNGAREDRAALGWYDVGLQLVKNGAGELGFQVRVGGGM
GRTPVISPVVREFLPWNQLMNYLEAVIRVYNRYGRRDNLWKARIKILVKSEGQTYVDQVEEEFRQIVEVEGGPHTITQAE
YDRVAACFHDPVPDLGGADAESQTLSLLRAAAEGDQGFGRWLTRNVLPHRHPLLRAVVLSFKRVGHAPGDATADQMDAAA
DLADRYSCGEARVTHEQNLLLPWVRADQLPALYQEARALGLAQPNIGLLTDMIACPGGDFCSLANARSLPIAEAITERYQ
DLDELWDLGEIDLHISGCINSCGHHHSGHIGILGVDKDGKEWYQITLGGADGTDLSGPAVPGKIIGPSFSAAEVPGVIEA
LLATYRDQRQPLSPEAAGSARGQKHEHFIDTVRRVGIEPFKAAANAARHPAESVAA

Specific function: Unknown

COG id: COG0155

COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005117
- InterPro:   IPR006067
- InterPro:   IPR006066 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.8.7.1 [H]

Molecular weight: Translated: 68081; Mature: 68081

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQYTEFDQQFIRLRADQYRDQLERFQAGKLSGDEFKPLRLQNGWYVQRYAPMLRVAVPY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEHHHHCCHHEEEECC
GELSSGQLRVLARIAREYDIPEPALLAEAQATQEKLGDIPLADGRRIGTRLKYGYGHFTT
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEECCCEEEE
RTNVQYNWIPLDKSADVMDLLASVHMHGIQTSGNCIRNITSDALAGIAADEIADPRPFAE
ECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
ILRQWSTLHPEFAFLPRKFKVSLNGAREDRAALGWYDVGLQLVKNGAGELGFQVRVGGGM
HHHHHHHCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GRTPVISPVVREFLPWNQLMNYLEAVIRVYNRYGRRDNLWKARIKILVKSEGQTYVDQVE
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCCHHHHHHH
EEFRQIVEVEGGPHTITQAEYDRVAACFHDPVPDLGGADAESQTLSLLRAAAEGDQGFGR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
WLTRNVLPHRHPLLRAVVLSFKRVGHAPGDATADQMDAAADLADRYSCGEARVTHEQNLL
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCE
LPWVRADQLPALYQEARALGLAQPNIGLLTDMIACPGGDFCSLANARSLPIAEAITERYQ
ECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHH
DLDELWDLGEIDLHISGCINSCGHHHSGHIGILGVDKDGKEWYQITLGGADGTDLSGPAV
HHHHHHCCCCEEEEHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
PGKIIGPSFSAAEVPGVIEALLATYRDQRQPLSPEAAGSARGQKHEHFIDTVRRVGIEPF
CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
KAAANAARHPAESVAA
HHHHHHHCCCHHHHCC
>Mature Secondary Structure
MYQYTEFDQQFIRLRADQYRDQLERFQAGKLSGDEFKPLRLQNGWYVQRYAPMLRVAVPY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEHHHHCCHHEEEECC
GELSSGQLRVLARIAREYDIPEPALLAEAQATQEKLGDIPLADGRRIGTRLKYGYGHFTT
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCEEEECCCEEEE
RTNVQYNWIPLDKSADVMDLLASVHMHGIQTSGNCIRNITSDALAGIAADEIADPRPFAE
ECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
ILRQWSTLHPEFAFLPRKFKVSLNGAREDRAALGWYDVGLQLVKNGAGELGFQVRVGGGM
HHHHHHHCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GRTPVISPVVREFLPWNQLMNYLEAVIRVYNRYGRRDNLWKARIKILVKSEGQTYVDQVE
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCCHHHHHHH
EEFRQIVEVEGGPHTITQAEYDRVAACFHDPVPDLGGADAESQTLSLLRAAAEGDQGFGR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
WLTRNVLPHRHPLLRAVVLSFKRVGHAPGDATADQMDAAADLADRYSCGEARVTHEQNLL
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCE
LPWVRADQLPALYQEARALGLAQPNIGLLTDMIACPGGDFCSLANARSLPIAEAITERYQ
ECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHH
DLDELWDLGEIDLHISGCINSCGHHHSGHIGILGVDKDGKEWYQITLGGADGTDLSGPAV
HHHHHHCCCCEEEEHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC
PGKIIGPSFSAAEVPGVIEALLATYRDQRQPLSPEAAGSARGQKHEHFIDTVRRVGIEPF
CCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH
KAAANAARHPAESVAA
HHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA