Click here to switch to the map view.

The map label for this gene is yjnA [H]

Identifier: 120611714

GI number: 120611714

Start: 3361845

End: 3362648

Strand: Direct

Name: yjnA [H]

Synonym: Aave_3052

Alternate gene names: 120611714

Gene position: 3361845-3362648 (Clockwise)

Preceding gene: 120611711

Following gene: 120611715

Centisome position: 62.81

GC content: 72.14

Gene sequence:

>804_bases
ATGCATGACCTGGCGTTCGTTTTCGCGGGATTCGCGGTGGGCCTGATCGTCGGCCTCACCGGGGTCGGTGGCGGCTCCCT
GATGACGCCCGTTCTGATCTTCTTTTTCGGCGTCAAGCCCCACCTGGCCATCGGCACGGACCTGCTGTTCGCCGCGTTCA
CCAAGATGGGCGGCACCGTGAGCCTGGCCCGCCAGCGCCTCGTGCCCTGGCGCGTGGTGGCCCTGCTGTGCGCGGGCAGC
ATCCCCTCGGCCCTGCTGGCCCTCTGGGCGCTGCGCACCATCGGCCCGGCCAGCGGCACCGCGCAGCACCTGATGACCAC
CACCCTGGGCGGCGCCCTGCTGCTCACGGCCGCCGCCACGCTGTACAAGGCCTTCGTCTTCTCCCCGGCCCGCCAGGCCG
CCGAACGCGCCGCCCGCCAGAGCGGGGGCGAACAGGCCGACCGCCCCCGCCACTGGAGCCTGCCCGTGCTGCTGGGCGCG
CTGATCGGCACCCTGGTCACCTTCACGTCCGTGGGTGCCGGCGCGATCGGCGTCACCGTGCTGCTGATGGTGTTCCCCCT
GCTGCCGCTGCCGCGGGTGATCGCCGCGGACATCGCCTATGCCGTGCCGCTGACGCTGGTGGCGGGCCTGGGCCATGCCA
GCCTCGGCTCCGTGGATTGGCCGCTTCTCGCACAATTGCTGGCCGGCTCCCTGCCGGGCATCTGGCTGGGCTCGCGGCTC
GTCTCCCGCGCGCCGGAGCGGTTCATCCGCTCGGCCCTTTCCGTGCTGCTCGCCTGGGCGGGCGCCAAACTGGTTCTGAT
CTGA

Upstream 100 bases:

>100_bases
CGCTTCAAATTGCGCCCGAAAACCGATATACATATATCGATATACCTGCAGGAGCAAACAATAGTTTGAAACCATAAGAC
GAGACCCTACAGTCACGCCC

Downstream 100 bases:

>100_bases
GTGCGCCCGCGAGGCGCGCAACCCCACCATGTACCAATACACAGAATTCGACCAACAGTTCATCCGCCTGCGCGCGGACC
AGTACCGCGACCAGCTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHDLAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFFGVKPHLAIGTDLLFAAFTKMGGTVSLARQRLVPWRVVALLCAGS
IPSALLALWALRTIGPASGTAQHLMTTTLGGALLLTAAATLYKAFVFSPARQAAERAARQSGGEQADRPRHWSLPVLLGA
LIGTLVTFTSVGAGAIGVTVLLMVFPLLPLPRVIAADIAYAVPLTLVAGLGHASLGSVDWPLLAQLLAGSLPGIWLGSRL
VSRAPERFIRSALSVLLAWAGAKLVLI

Sequences:

>Translated_267_residues
MHDLAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFFGVKPHLAIGTDLLFAAFTKMGGTVSLARQRLVPWRVVALLCAGS
IPSALLALWALRTIGPASGTAQHLMTTTLGGALLLTAAATLYKAFVFSPARQAAERAARQSGGEQADRPRHWSLPVLLGA
LIGTLVTFTSVGAGAIGVTVLLMVFPLLPLPRVIAADIAYAVPLTLVAGLGHASLGSVDWPLLAQLLAGSLPGIWLGSRL
VSRAPERFIRSALSVLLAWAGAKLVLI
>Mature_267_residues
MHDLAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFFGVKPHLAIGTDLLFAAFTKMGGTVSLARQRLVPWRVVALLCAGS
IPSALLALWALRTIGPASGTAQHLMTTTLGGALLLTAAATLYKAFVFSPARQAAERAARQSGGEQADRPRHWSLPVLLGA
LIGTLVTFTSVGAGAIGVTVLLMVFPLLPLPRVIAADIAYAVPLTLVAGLGHASLGSVDWPLLAQLLAGSLPGIWLGSRL
VSRAPERFIRSALSVLLAWAGAKLVLI

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27614; Mature: 27614

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFFGVKPHLAIGTDLLFAAFTKMGGTV
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
SLARQRLVPWRVVALLCAGSIPSALLALWALRTIGPASGTAQHLMTTTLGGALLLTAAAT
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LYKAFVFSPARQAAERAARQSGGEQADRPRHWSLPVLLGALIGTLVTFTSVGAGAIGVTV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLMVFPLLPLPRVIAADIAYAVPLTLVAGLGHASLGSVDWPLLAQLLAGSLPGIWLGSRL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
VSRAPERFIRSALSVLLAWAGAKLVLI
HHHHHHHHHHHHHHHHHHHHCCCEEEC
>Mature Secondary Structure
MHDLAFVFAGFAVGLIVGLTGVGGGSLMTPVLIFFFGVKPHLAIGTDLLFAAFTKMGGTV
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
SLARQRLVPWRVVALLCAGSIPSALLALWALRTIGPASGTAQHLMTTTLGGALLLTAAAT
HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LYKAFVFSPARQAAERAARQSGGEQADRPRHWSLPVLLGALIGTLVTFTSVGAGAIGVTV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLMVFPLLPLPRVIAADIAYAVPLTLVAGLGHASLGSVDWPLLAQLLAGSLPGIWLGSRL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
VSRAPERFIRSALSVLLAWAGAKLVLI
HHHHHHHHHHHHHHHHHHHHCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]