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The map label for this gene is cyt [H]

Identifier: 120611701

GI number: 120611701

Start: 3349132

End: 3349482

Strand: Direct

Name: cyt [H]

Synonym: Aave_3038

Alternate gene names: 120611701

Gene position: 3349132-3349482 (Clockwise)

Preceding gene: 120611697

Following gene: 120611710

Centisome position: 62.57

GC content: 75.21

Gene sequence:

>351_bases
ATGCCGCTGCCATCCACCGCCCTCCCCCACGCCGCACGGGCCTTGGCCGCGGCCGCCCTCTGCCTGGCGGCGGCCCTGCC
GGCACCCGCCCGGGCGGACGCCGGCGACCTCGTGCGCGAGCACGGCTGCATGCGCTGCCACGCCTTGGTGCGCACCTACG
TGGGCCCCGGGTTCGCGGAGATCGCCGAACGCTACCGCGCCGACAGGAATGCAGAAACCTACCTTGCCGGCAAGATCCGC
AACGGCGGCGCGGGCGAATGGGGCCGCGCGCTCATGCCGCGGCACCCGCGCATCGGGGAAGAAGAAGCGCGGACCCTGGC
CCGGTGGATCCTCGCCCGGCGCAAGGGCTAG

Upstream 100 bases:

>100_bases
CAGCACAGCCGCAGCCCAAAAAAAGCCCGCGCGATGCGGGCCGGCGATGGCGGCATACTCGGCGCATCGCCTTTGCCCGT
CCCGGGCTTCCACCGATCCG

Downstream 100 bases:

>100_bases
GTGCTGCAGCCGCGGCGATCCCCGGTCAGCGCGCGGCGCGCAGCGCCTCGTCCACCGCTTCGCGCGTCAGGGTGGGAACG
AAGGCCTCGATGAAGCGGTA

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MPLPSTALPHAARALAAAALCLAAALPAPARADAGDLVREHGCMRCHALVRTYVGPGFAEIAERYRADRNAETYLAGKIR
NGGAGEWGRALMPRHPRIGEEEARTLARWILARRKG

Sequences:

>Translated_116_residues
MPLPSTALPHAARALAAAALCLAAALPAPARADAGDLVREHGCMRCHALVRTYVGPGFAEIAERYRADRNAETYLAGKIR
NGGAGEWGRALMPRHPRIGEEEARTLARWILARRKG
>Mature_115_residues
PLPSTALPHAARALAAAALCLAAALPAPARADAGDLVREHGCMRCHALVRTYVGPGFAEIAERYRADRNAETYLAGKIRN
GGAGEWGRALMPRHPRIGEEEARTLARWILARRKG

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12493; Mature: 12361

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPSTALPHAARALAAAALCLAAALPAPARADAGDLVREHGCMRCHALVRTYVGPGFAE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAERYRADRNAETYLAGKIRNGGAGEWGRALMPRHPRIGEEEARTLARWILARRKG
HHHHHHCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLPSTALPHAARALAAAALCLAAALPAPARADAGDLVREHGCMRCHALVRTYVGPGFAE
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAERYRADRNAETYLAGKIRNGGAGEWGRALMPRHPRIGEEEARTLARWILARRKG
HHHHHHCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]