| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is gluQ [H]
Identifier: 120611695
GI number: 120611695
Start: 3340692
End: 3341699
Strand: Direct
Name: gluQ [H]
Synonym: Aave_3032
Alternate gene names: 120611695
Gene position: 3340692-3341699 (Clockwise)
Preceding gene: 120611694
Following gene: 120611696
Centisome position: 62.41
GC content: 73.81
Gene sequence:
>1008_bases ATGAGCGTCTCCCCGGCCGCATCCACGCAAGCCCCGGCCGCGGGCCGACGCTATGTAGGCCGCTTCGCGCCCTCGCCCAC CGGCCCGCTGCATGCGGGCTCGCTGGTGGCCGCGCTGGCCAGTTGGCTGGACGCGCGCTCCGCGGACGATGGCCGCGGCG GCATCTGGCTGGTGCGCATCGAAGACGTGGACACGCCACGCTGCCAGCCCGGCGCGGCGGAGACGATTCTGCGGCAGCTC GCGGACTGCGGCCTCGTGCCGGACGGCACGGTGTGGTGGCAGTCGGCACGCCACGCGCGGTATGCCGAGCAGCTGGAGCA TCTGGCGCACGCAGGGCTGGCCTACCCGTGCGCCTGCACCCGCGCGGACATCGAGCGCGCCCATCGGCTGCACCACGGCG CGCGCGACCGCCATTCGGAGCTGCCCTATCCGGGCACCTGCCGCAACGGCCTGGGCGGGCGCCCGCCCCGGTCCTGGCGG TTTCGCACGTCGGAATACCAGAAGAAATTTGCCCCGCAGGCCGCCGCGCAGGCGCAGGACCGCCCCGCCATCCATGCGGG CGGCGTGGCCTGGACCGACCGGCGCCTGGGACCGCGCACGCAGGACGTGGCGGAGGTGGTGGGCGACTTCGTGCTGCGCC GCGCGGACGGCCTCTGGGCTTACCAGCTCGCCGTGGTGGTGGACGATGCCGACCAGGGAGTGACGCACGTGGTCCGCGGG GAAGACCTGCTGGACAACACGCCCAGGCAGATTCTTCTGCGGCACGCCCTCGGGGCCGGGGCCCCCTCCTACCTGCACAC GCCCCTGGTGCGCGCACCGGACGGAGAGAAACTCTCCAAACAGCACGGCGCGCCGGCGGTGGACACCTCGAACCCTCTGG CGGCGCTCCGCGCAGCGGCCGGCGCGCTGGGGCTGCCGCCTCTGCAGCATCCGCACGACACCACCGTCGGCGAGGCGCTG GCGTGGTGGGCGCAGGCATGGCCGCGAATCTACAATCGGCCATCGTGA
Upstream 100 bases:
>100_bases GGGACGCCGCGGCCGGCATCGGGCTGGCCGGCGACTGGTGCCTGGGCCACCGGGTCGAGGACGCGTTCGTTGCGGGGCTC GAACTCGCGCTCGCGGTGGC
Downstream 100 bases:
>100_bases CAGCCATGCATTCCATCCCGGCCGATACCGGCCACACCCCTTCGCGCGCGCCTGCCGGCAACGGCTCGCCGCCCGCCGAT GTTGCCTTTCCCAAGGCGAT
Product: glutamate--tRNA ligase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSVSPAASTQAPAAGRRYVGRFAPSPTGPLHAGSLVAALASWLDARSADDGRGGIWLVRIEDVDTPRCQPGAAETILRQL ADCGLVPDGTVWWQSARHARYAEQLEHLAHAGLAYPCACTRADIERAHRLHHGARDRHSELPYPGTCRNGLGGRPPRSWR FRTSEYQKKFAPQAAAQAQDRPAIHAGGVAWTDRRLGPRTQDVAEVVGDFVLRRADGLWAYQLAVVVDDADQGVTHVVRG EDLLDNTPRQILLRHALGAGAPSYLHTPLVRAPDGEKLSKQHGAPAVDTSNPLAALRAAAGALGLPPLQHPHDTTVGEAL AWWAQAWPRIYNRPS
Sequences:
>Translated_335_residues MSVSPAASTQAPAAGRRYVGRFAPSPTGPLHAGSLVAALASWLDARSADDGRGGIWLVRIEDVDTPRCQPGAAETILRQL ADCGLVPDGTVWWQSARHARYAEQLEHLAHAGLAYPCACTRADIERAHRLHHGARDRHSELPYPGTCRNGLGGRPPRSWR FRTSEYQKKFAPQAAAQAQDRPAIHAGGVAWTDRRLGPRTQDVAEVVGDFVLRRADGLWAYQLAVVVDDADQGVTHVVRG EDLLDNTPRQILLRHALGAGAPSYLHTPLVRAPDGEKLSKQHGAPAVDTSNPLAALRAAAGALGLPPLQHPHDTTVGEAL AWWAQAWPRIYNRPS >Mature_334_residues SVSPAASTQAPAAGRRYVGRFAPSPTGPLHAGSLVAALASWLDARSADDGRGGIWLVRIEDVDTPRCQPGAAETILRQLA DCGLVPDGTVWWQSARHARYAEQLEHLAHAGLAYPCACTRADIERAHRLHHGARDRHSELPYPGTCRNGLGGRPPRSWRF RTSEYQKKFAPQAAAQAQDRPAIHAGGVAWTDRRLGPRTQDVAEVVGDFVLRRADGLWAYQLAVVVDDADQGVTHVVRGE DLLDNTPRQILLRHALGAGAPSYLHTPLVRAPDGEKLSKQHGAPAVDTSNPLAALRAAAGALGLPPLQHPHDTTVGEALA WWAQAWPRIYNRPS
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=279, Percent_Identity=35.4838709677419, Blast_Score=134, Evalue=8e-32, Organism=Escherichia coli, GI226510925, Length=311, Percent_Identity=44.3729903536978, Blast_Score=208, Evalue=3e-55, Organism=Escherichia coli, GI1788743, Length=275, Percent_Identity=35.6363636363636, Blast_Score=155, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71993394, Length=295, Percent_Identity=30.1694915254237, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324540, Length=277, Percent_Identity=34.2960288808664, Blast_Score=141, Evalue=1e-34, Organism=Drosophila melanogaster, GI24665321, Length=286, Percent_Identity=33.2167832167832, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 36195; Mature: 36064
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSPAASTQAPAAGRRYVGRFAPSPTGPLHAGSLVAALASWLDARSADDGRGGIWLVRI CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEE EDVDTPRCQPGAAETILRQLADCGLVPDGTVWWQSARHARYAEQLEHLAHAGLAYPCACT ECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RADIERAHRLHHGARDRHSELPYPGTCRNGLGGRPPRSWRFRTSEYQKKFAPQAAAQAQD HHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCC RPAIHAGGVAWTDRRLGPRTQDVAEVVGDFVLRRADGLWAYQLAVVVDDADQGVTHVVRG CCCEEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHCC EDLLDNTPRQILLRHALGAGAPSYLHTPLVRAPDGEKLSKQHGAPAVDTSNPLAALRAAA CHHHHCCHHHHHHHHHHCCCCCHHHHCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHH GALGLPPLQHPHDTTVGEALAWWAQAWPRIYNRPS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVSPAASTQAPAAGRRYVGRFAPSPTGPLHAGSLVAALASWLDARSADDGRGGIWLVRI CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEE EDVDTPRCQPGAAETILRQLADCGLVPDGTVWWQSARHARYAEQLEHLAHAGLAYPCACT ECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH RADIERAHRLHHGARDRHSELPYPGTCRNGLGGRPPRSWRFRTSEYQKKFAPQAAAQAQD HHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCC RPAIHAGGVAWTDRRLGPRTQDVAEVVGDFVLRRADGLWAYQLAVVVDDADQGVTHVVRG CCCEEECCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHCC EDLLDNTPRQILLRHALGAGAPSYLHTPLVRAPDGEKLSKQHGAPAVDTSNPLAALRAAA CHHHHCCHHHHHHHHHHCCCCCHHHHCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHH GALGLPPLQHPHDTTVGEALAWWAQAWPRIYNRPS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA