| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611694
Identifier: 120611694
GI number: 120611694
Start: 3339586
End: 3340695
Strand: Direct
Name: 120611694
Synonym: Aave_3031
Alternate gene names: NA
Gene position: 3339586-3340695 (Clockwise)
Preceding gene: 120611693
Following gene: 120611695
Centisome position: 62.39
GC content: 75.41
Gene sequence:
>1110_bases ATGACTTCTTCCCGCTCCCGTTCCCGCACGCCATCCCCAGGCGCTTCCGCCGGCACCGGCGGGCCGCCCCCGTCCGCCCG GCGCATCGCCGTGGTCGGCGCGGGAATGGCCGGCATCGCCTGCGCCCGCACCCTGGCGCAGGCCGGGCACGCGCCGGTCG TCTTCGAGCAGGCCCGCCGCCCCGGCGGCCGGATGGCGACGGTGGAATCGGCGTTCGGAGGTTTCGATGCCGGCGCCCAG TACTTCACCGTGCGCGATGCGCGCTTCGCGCGCGCGCTGGAAACCGTGCCCGGGCTGTGCCGCCCCTGGAGCGCGAGCAC CGTCAAGGTACTGGATGCCGCGGGACGCACGGCCGCCGCCGCGCCACCGCCACGCGAACCGCACTGGGTGGCCACGCCCG GCATGCAGTCCTTGCTGGCCGCGTGGGCACAGCCCCTGGAGCAGGCGGGCCGCCTGTTGCCGGATGCGCGGGTGACCCGC ATCGGCGCCGACCCCGTGCAGCCGGGCCGCTGGCGGCTGCATACCCTGTCGCAGGACGGGGGCCGGCAGGTGCACGCGGG CTTCGATGCGGTGCTGCTGCTCATTCCGGCCGCCCAGGCCAGTGCCCTGCTGCAGGCCTCGGACGTCGCGCCCGGGCTCG CGGCCGGATTGCATGCGGTGGAGGCAGCGCCGTGCTGGACGCTGATGGTGGCCTACCCCCATGCCGTGCAGCCCGGCCTC ACGACGCTCGGGCCGCAATGGAATGCCGCGCGCAGCACGCACCACCGCATCGCCTGGGTCGCGCGCGAGTCGTCGAAGCC GGGCCGCGCCCCCGTGGAGCGCTGGACGGCGCAGGCCAGCCCCGCATGGTCGTCGGAACACCGCAACGATGCACCCGCCC GCGTGCAGGCCAAGCTGCTCAAGGCCTTCGCGGAGGTGACCGGCCTGCGCGCCGCGCCCGTCCATGCGGAAGTGCTTTAC TGGCCCGACGCGCAGACGACGCGGCCACTGGGGCGCAGCCACCTGTGGGACGCCGCGGCCGGCATCGGGCTGGCCGGCGA CTGGTGCCTGGGCCACCGGGTCGAGGACGCGTTCGTTGCGGGGCTCGAACTCGCGCTCGCGGTGGCATGA
Upstream 100 bases:
>100_bases TCGAGAGCCCCGCCACCCGCGCGGCGCTGCTGGAAAACCACCATCCGTTCTGAGGCGCGCCGCGGCGTCTCGCACCCATG TATCCATGAAAGGCCGGACC
Downstream 100 bases:
>100_bases GCGTCTCCCCGGCCGCATCCACGCAAGCCCCGGCCGCGGGCCGACGCTATGTAGGCCGCTTCGCGCCCTCGCCCACCGGC CCGCTGCATGCGGGCTCGCT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Transmembrane Protein; Amine Oxidase Flavin-Containing; Deoxyribodipyrimidine Photolyase; Amine Oxidase; NAD/Fad-Dependent Oxidoreductase Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTSSRSRSRTPSPGASAGTGGPPPSARRIAVVGAGMAGIACARTLAQAGHAPVVFEQARRPGGRMATVESAFGGFDAGAQ YFTVRDARFARALETVPGLCRPWSASTVKVLDAAGRTAAAAPPPREPHWVATPGMQSLLAAWAQPLEQAGRLLPDARVTR IGADPVQPGRWRLHTLSQDGGRQVHAGFDAVLLLIPAAQASALLQASDVAPGLAAGLHAVEAAPCWTLMVAYPHAVQPGL TTLGPQWNAARSTHHRIAWVARESSKPGRAPVERWTAQASPAWSSEHRNDAPARVQAKLLKAFAEVTGLRAAPVHAEVLY WPDAQTTRPLGRSHLWDAAAGIGLAGDWCLGHRVEDAFVAGLELALAVA
Sequences:
>Translated_369_residues MTSSRSRSRTPSPGASAGTGGPPPSARRIAVVGAGMAGIACARTLAQAGHAPVVFEQARRPGGRMATVESAFGGFDAGAQ YFTVRDARFARALETVPGLCRPWSASTVKVLDAAGRTAAAAPPPREPHWVATPGMQSLLAAWAQPLEQAGRLLPDARVTR IGADPVQPGRWRLHTLSQDGGRQVHAGFDAVLLLIPAAQASALLQASDVAPGLAAGLHAVEAAPCWTLMVAYPHAVQPGL TTLGPQWNAARSTHHRIAWVARESSKPGRAPVERWTAQASPAWSSEHRNDAPARVQAKLLKAFAEVTGLRAAPVHAEVLY WPDAQTTRPLGRSHLWDAAAGIGLAGDWCLGHRVEDAFVAGLELALAVA >Mature_368_residues TSSRSRSRTPSPGASAGTGGPPPSARRIAVVGAGMAGIACARTLAQAGHAPVVFEQARRPGGRMATVESAFGGFDAGAQY FTVRDARFARALETVPGLCRPWSASTVKVLDAAGRTAAAAPPPREPHWVATPGMQSLLAAWAQPLEQAGRLLPDARVTRI GADPVQPGRWRLHTLSQDGGRQVHAGFDAVLLLIPAAQASALLQASDVAPGLAAGLHAVEAAPCWTLMVAYPHAVQPGLT TLGPQWNAARSTHHRIAWVARESSKPGRAPVERWTAQASPAWSSEHRNDAPARVQAKLLKAFAEVTGLRAAPVHAEVLYW PDAQTTRPLGRSHLWDAAAGIGLAGDWCLGHRVEDAFVAGLELALAVA
Specific function: Unknown
COG id: COG3380
COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38635; Mature: 38504
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSRSRSRTPSPGASAGTGGPPPSARRIAVVGAGMAGIACARTLAQAGHAPVVFEQARR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEHHHHCC PGGRMATVESAFGGFDAGAQYFTVRDARFARALETVPGLCRPWSASTVKVLDAAGRTAAA CCCCEEEHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCC APPPREPHWVATPGMQSLLAAWAQPLEQAGRLLPDARVTRIGADPVQPGRWRLHTLSQDG CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCC GRQVHAGFDAVLLLIPAAQASALLQASDVAPGLAAGLHAVEAAPCWTLMVAYPHAVQPGL CCEECCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC TTLGPQWNAARSTHHRIAWVARESSKPGRAPVERWTAQASPAWSSEHRNDAPARVQAKLL HHCCCCCCCHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH KAFAEVTGLRAAPVHAEVLYWPDAQTTRPLGRSHLWDAAAGIGLAGDWCLGHRVEDAFVA HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHH GLELALAVA HHHEEEEEC >Mature Secondary Structure TSSRSRSRTPSPGASAGTGGPPPSARRIAVVGAGMAGIACARTLAQAGHAPVVFEQARR CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEHHHHCC PGGRMATVESAFGGFDAGAQYFTVRDARFARALETVPGLCRPWSASTVKVLDAAGRTAAA CCCCEEEHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCC APPPREPHWVATPGMQSLLAAWAQPLEQAGRLLPDARVTRIGADPVQPGRWRLHTLSQDG CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCC GRQVHAGFDAVLLLIPAAQASALLQASDVAPGLAAGLHAVEAAPCWTLMVAYPHAVQPGL CCEECCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC TTLGPQWNAARSTHHRIAWVARESSKPGRAPVERWTAQASPAWSSEHRNDAPARVQAKLL HHCCCCCCCHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH KAFAEVTGLRAAPVHAEVLYWPDAQTTRPLGRSHLWDAAAGIGLAGDWCLGHRVEDAFVA HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHH GLELALAVA HHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA