| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yflP [H]
Identifier: 120611674
GI number: 120611674
Start: 3320936
End: 3321895
Strand: Reverse
Name: yflP [H]
Synonym: Aave_3011
Alternate gene names: 120611674
Gene position: 3321895-3320936 (Counterclockwise)
Preceding gene: 120611680
Following gene: 120611673
Centisome position: 62.06
GC content: 68.75
Gene sequence:
>960_bases ATGCGTCGCGATACCTTCCTCAAGTCCCTGGCAGCCCTCGCGGCCGCCGGTGCGCTGCCGCTCTCGGCCCGGGCCGCGGC CGCGATCAAGATGCTGCTGCCCGCCAACCCCGGCGGCGGCTGGGACACCACCGGCCGGGCGCTCGGCAAGGCGATGCAGG ACGCGGGCGTGGCCTCGTCCGTCACCTACGACAACAAGGGCGGCGCGGCCGGTGCCATCGGCCTCGCGCAATTCGTCAAT TCCGCCAAGGGCGACCCGAACGCCCTGATGGTGATGGGCTCGGTCATGGTGGGCGGCATCATCACCGGCAAGCCGCCGGT CAACCTCTCGCAGGCCACCCCGATCGCGCGCCTGACGAGCGAGTACAACGTGTTCGTGCTGCCCGCCAATTCGCCGTTCA AGTCGATGGCCGAGGTGATCGACCAGCTCAAGAAGGACCCGGGCAGCGTGAAGTGGGGCGGCGGCTCGCGCGGCTCCACC GAGCACATCGCGGCGGCCATGATCGCGCGCGAAGTGGGCGTGGACCCGGCCAAGATCAACTACGTGGCGTTTCGTGGAGG CGGTGAATCCGTCGCGGCCATCCTGGGCGGCAACGTCACCATCGGCGGCGGCGGCTTCAGCGAGATGGCCGAGTACATCA ACACCAAGAAGATGGTGCCGGTGGCCGTCACGTCGGGCCAGCGCCTGAAGGGCTCGAGCGTGCCGACGCTCAGGGAGCAG GGCATCAACGTGGAGATCGGCAACTGGCGCGGCGTCTATGCGCCTCCGGGCATCTCCGCGCCGCAGCGCAAGGCACTCAT CGACATGGTGGCCCAGGCGACGAAGAGCAAGAGCTGGGCCGAATCCATGGAGAAGAACGACTGGACCGCCGCCTGGCTCG CGGGCGACGAATTCGGCGCCTTCGTGGATGCCGAGTTCGCCAGCATGCGCGCCACCATGGTCAAGGCCGGCATGGTCTGA
Upstream 100 bases:
>100_bases TGGCCCCCATGGGTGTTTTCCCTGAGTCGGCGGACAGCCGTTTGACAGGAAGCGGGCGCATCATCGGCCCCGTTCGCCAT ACCACAAGGAGACAAGAACC
Downstream 100 bases:
>100_bases CCCCGCGGCGGGCGCCATGCCCGCCGTGCTTCCCGAGTTTCCCTTTTTTTTCCGTACCGCGTGGCACGGCCGGTTGGCGC GTGCCCGCGCGCCATGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRRDTFLKSLAALAAAGALPLSARAAAAIKMLLPANPGGGWDTTGRALGKAMQDAGVASSVTYDNKGGAAGAIGLAQFVN SAKGDPNALMVMGSVMVGGIITGKPPVNLSQATPIARLTSEYNVFVLPANSPFKSMAEVIDQLKKDPGSVKWGGGSRGST EHIAAAMIAREVGVDPAKINYVAFRGGGESVAAILGGNVTIGGGGFSEMAEYINTKKMVPVAVTSGQRLKGSSVPTLREQ GINVEIGNWRGVYAPPGISAPQRKALIDMVAQATKSKSWAESMEKNDWTAAWLAGDEFGAFVDAEFASMRATMVKAGMV
Sequences:
>Translated_319_residues MRRDTFLKSLAALAAAGALPLSARAAAAIKMLLPANPGGGWDTTGRALGKAMQDAGVASSVTYDNKGGAAGAIGLAQFVN SAKGDPNALMVMGSVMVGGIITGKPPVNLSQATPIARLTSEYNVFVLPANSPFKSMAEVIDQLKKDPGSVKWGGGSRGST EHIAAAMIAREVGVDPAKINYVAFRGGGESVAAILGGNVTIGGGGFSEMAEYINTKKMVPVAVTSGQRLKGSSVPTLREQ GINVEIGNWRGVYAPPGISAPQRKALIDMVAQATKSKSWAESMEKNDWTAAWLAGDEFGAFVDAEFASMRATMVKAGMV >Mature_319_residues MRRDTFLKSLAALAAAGALPLSARAAAAIKMLLPANPGGGWDTTGRALGKAMQDAGVASSVTYDNKGGAAGAIGLAQFVN SAKGDPNALMVMGSVMVGGIITGKPPVNLSQATPIARLTSEYNVFVLPANSPFKSMAEVIDQLKKDPGSVKWGGGSRGST EHIAAAMIAREVGVDPAKINYVAFRGGGESVAAILGGNVTIGGGGFSEMAEYINTKKMVPVAVTSGQRLKGSSVPTLREQ GINVEIGNWRGVYAPPGISAPQRKALIDMVAQATKSKSWAESMEKNDWTAAWLAGDEFGAFVDAEFASMRATMVKAGMV
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32862; Mature: 32862
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDTFLKSLAALAAAGALPLSARAAAAIKMLLPANPGGGWDTTGRALGKAMQDAGVASS CCHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCE VTYDNKGGAAGAIGLAQFVNSAKGDPNALMVMGSVMVGGIITGKPPVNLSQATPIARLTS EEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHCEEECCCCCCCCCCCCCHHHHCC EYNVFVLPANSPFKSMAEVIDQLKKDPGSVKWGGGSRGSTEHIAAAMIAREVGVDPAKIN CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHEE YVAFRGGGESVAAILGGNVTIGGGGFSEMAEYINTKKMVPVAVTSGQRLKGSSVPTLREQ EEEEECCCCEEEEEECCCEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHC GINVEIGNWRGVYAPPGISAPQRKALIDMVAQATKSKSWAESMEKNDWTAAWLAGDEFGA CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCC FVDAEFASMRATMVKAGMV CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRDTFLKSLAALAAAGALPLSARAAAAIKMLLPANPGGGWDTTGRALGKAMQDAGVASS CCHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCE VTYDNKGGAAGAIGLAQFVNSAKGDPNALMVMGSVMVGGIITGKPPVNLSQATPIARLTS EEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHCEEECCCCCCCCCCCCCHHHHCC EYNVFVLPANSPFKSMAEVIDQLKKDPGSVKWGGGSRGSTEHIAAAMIAREVGVDPAKIN CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHEE YVAFRGGGESVAAILGGNVTIGGGGFSEMAEYINTKKMVPVAVTSGQRLKGSSVPTLREQ EEEEECCCCEEEEEECCCEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHC GINVEIGNWRGVYAPPGISAPQRKALIDMVAQATKSKSWAESMEKNDWTAAWLAGDEFGA CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCC FVDAEFASMRATMVKAGMV CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]