| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611667
Identifier: 120611667
GI number: 120611667
Start: 3311870
End: 3312274
Strand: Reverse
Name: 120611667
Synonym: Aave_3004
Alternate gene names: NA
Gene position: 3312274-3311870 (Counterclockwise)
Preceding gene: 120611668
Following gene: 120611662
Centisome position: 61.88
GC content: 74.07
Gene sequence:
>405_bases ATGTCCGGTACTTCGTCCCGCCGCACCCGTTCCCTGGCACGCCAGGGGGCCGAACTCGCCATGGCCGTGCCGCCCGTCGT CGCGCACCGCGTGGCGCGCATGGCCCTCGCCGGCGCCACCCCCTCGCAGCGCGACCGGCGCGAATTCGGCCGAATGGTCG CCGAGAAGCAGTGGGCCTTCATGCAGTCCTGGGCCGCCATGGGCATGCAGGCCCTGCTGGCCCAGCAGGCCATGGCGGCC AGCATGGTGCGGCTGTGGTGGACGCCCTGGACCATGGCCACCGGCCCGCAACTGGTGCGCCAGTGGCAGGACGCGGCGGC CGGCGTGCTCGGCAAGGGGCTCGTTCCGGTCCACCGTGTCGCGGTGGCGAACGCCCGACGCCTGGCGCGCACGTCCCTGG TCTGA
Upstream 100 bases:
>100_bases GGACTGACCTGCCGCAAACCCCCGCGGCGCGCGCGGTTGCTTGGAGCCTGCGCCGCGGACGACCGGTAGAGTGGGGGGGC CGCCACTTCGAGGAATGCCC
Downstream 100 bases:
>100_bases AATCCGCCGTGCGGCGGGGAATCGGAACAGGCCGCGCCCGTTACCTGGCGGCGACGGCCTCGGGCATGGCCGAGGAGTGG TGGTGGGCGATCTTCCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSGTSSRRTRSLARQGAELAMAVPPVVAHRVARMALAGATPSQRDRREFGRMVAEKQWAFMQSWAAMGMQALLAQQAMAA SMVRLWWTPWTMATGPQLVRQWQDAAAGVLGKGLVPVHRVAVANARRLARTSLV
Sequences:
>Translated_134_residues MSGTSSRRTRSLARQGAELAMAVPPVVAHRVARMALAGATPSQRDRREFGRMVAEKQWAFMQSWAAMGMQALLAQQAMAA SMVRLWWTPWTMATGPQLVRQWQDAAAGVLGKGLVPVHRVAVANARRLARTSLV >Mature_133_residues SGTSSRRTRSLARQGAELAMAVPPVVAHRVARMALAGATPSQRDRREFGRMVAEKQWAFMQSWAAMGMQALLAQQAMAAS MVRLWWTPWTMATGPQLVRQWQDAAAGVLGKGLVPVHRVAVANARRLARTSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14666; Mature: 14535
Theoretical pI: Translated: 12.72; Mature: 12.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTSSRRTRSLARQGAELAMAVPPVVAHRVARMALAGATPSQRDRREFGRMVAEKQWAF CCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MQSWAAMGMQALLAQQAMAASMVRLWWTPWTMATGPQLVRQWQDAAAGVLGKGLVPVHRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH AVANARRLARTSLV HHHHHHHHHHHHCC >Mature Secondary Structure SGTSSRRTRSLARQGAELAMAVPPVVAHRVARMALAGATPSQRDRREFGRMVAEKQWAF CCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH MQSWAAMGMQALLAQQAMAASMVRLWWTPWTMATGPQLVRQWQDAAAGVLGKGLVPVHRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH AVANARRLARTSLV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA