Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120611668

Identifier: 120611668

GI number: 120611668

Start: 3312368

End: 3314620

Strand: Reverse

Name: 120611668

Synonym: Aave_3005

Alternate gene names: NA

Gene position: 3314620-3312368 (Counterclockwise)

Preceding gene: 120611669

Following gene: 120611667

Centisome position: 61.92

GC content: 72.44

Gene sequence:

>2253_bases
ATGGAATGTATGAAAGGCAGACCCACTGCCTGCCGGGCAGCGCTGCGGCGCACCGGTGGCGGATGCCCCCGGCGGGCGCG
GATAGCCTCATACTCCGGCCACCCCAGAGAGGAGATCCCGCACATGACTGTCTTTAAAACCGCCCCCCTGCTCATCGCCG
CCCTGGCCGCTTCCTCGTGCGGGGGCGGAGGCAGCGGCGCAGCGGTCGACTACGACTTCAACGTCCGCCCGTCGTACCTG
AACGATCTGCGGCAGGCGAGCTACGACGGCGCGGGCAACGACCTGCTGACCGGCGGCCTCGGCCGCTCCGGCCTGCAGGA
CGATTCGCCGCCGGGCTACGCGGGCAGCCAGCCCACGGCGGAGGAGTTGCGGCGAAATGCCATCTATGTGAACTATCGGG
CGCTGGTGGACACGACTTCCGAAGGGGGCTACGGCAGGCTGTACGGCCCGAACGTGGACGCGCAGGGCCGTGCGACATCG
GGCGAAGGCATGGTGGCCGGCACGGAAGCCATCGCCTATTCGGACGACGGCTCGGGGCGCCGCAATGTCACTCTGATGGT
GCAGGTGCCGGATGCCTTCGACCGCACGCGCCCCTGCATCATCACCGCCACCTCGTCCGGCTCGCGCGGCATCTACGGCG
GCATTCCCACGGGCGAATGGGGCCTCAAGCGCGGCTGCGCCGTGGCCTATACGGACAAGGGCACGGGCGCCGCGCCCCAT
GACCTGCAGGCCGATACCGTCGCGCTGATCGACGGCACGCGCACCAGCGCCACGCTCGCGGGCACGCGCGCCGCCTTCGA
CGCAGGCCTGTCGGCGGCGGACCTCGCGGCCTTCAACGGGGCCACGCCGCAGCGCCTGGCGTTCAAGCACGCGCATTCCG
GGCAGAACCCGGAAAAGGACTGGGGCCTCTCCACCCTGCAGGCGGTCGAGTTCGCGTTCTACGTGCTCAACGAGCGCTTC
GGCGACCGCTCGCCGGGCGGGCAGGCGCTGCGCACCTTCACGCCGGCCAACACGACGGTGATCGCCTCCAGCCTCTCGAA
CGGCGGCGGCGCGGCGATCGCGGCGGCCGAGCAGGACACCCGAGGCCTCATCGACGGGGTGGCCGTGTCGGAGCCCTCGG
TGCAGATGCCGGCCAACGCGGGCGTCACCGTGCAGCGCGGCGGGCGCACCGTCGCCGTGAACGGCCTCCCGCTGATCGAC
TACACCACCCAGGCCCACCTCTACCAGGCCTGCGCCGCCCTCGCGCCCTCGCTGGCCTCCACGCCCTTCGCGGCGGCCTT
CGCCGTCCGCTTCGCGGACCCGGCCTTCCCCGTGGCCGCCAACCGCTGTGCCGGCCTGAAGGCCCGGGGCCTGCTCTCGG
CCGCCACCACGGCCGCCCAGGCCGAGGAGGCGCTGGCGCGCCTGACCGCCTATGGCTGGGAGCCCGAGTCGGGTGCGCTG
CACGCCTCGCTCGCGGCGTTCGAAGTGGCTCCGTCGATCGCCGTCACCTATGCCAACGCGCTCTCGCGCGCGAGCGTCCA
GGACCGGCTGTGCGGCTACAGCTTCGCCACCACGTCGGCCATCGGCGCGGTGCAGCCCACGCCCGCCGCGGTGACGAACA
CCCTGTTCGCCACCGGCAACGGCATCCCGCCCACCGCCGGCGTGCAGCTCGTCAACGACCGCAGCCGAGGCGTGCCGGTG
CGCGACCTGTTCTCGTCCAATGCCGCGGGCGTGCCCACCTGGAACCTGGAAGGCGCGCTCTGCCTGCGCAGCCTCGTGAC
GGGCACCGACGCGGCCGCCCGGCGCCTGCAGTCCGGCCTCGACGAAACCCGCCGCACCGGCAACCTGCAGGGCAAGCCCG
CCATCATCGTGCACGGCCGCGACGACGCGCTCATCCCGGTCAACCACACCTCGCGTCCCTACGCCGCCCTGAACCGGCGC
GTGGAGGGCGCCGCCAGCCGCCTGAGCTACATCGAGGTCACGAACGCCCAGCATTTCGATGCCTTCATCGGCCTGCCGGC
CACGCTGCCGGGCTACGACAGCCGCTACATCCCCCTGCACCTGTACCTCAACCGCGCGCTCGATGCCATGTACGCGCACC
TGGTGAACGGCGAGCCGCTGCCGGCCAGCCAAGTGGTGCGCACCGTGCCGCGCGGCGGCACGCCGGGCAGCGCCCCCGCG
ATCACCGCGGCGAACGTGCCACCCATCGCGGCCATGCCCGTCGCTGCCGATGCCGTCGCCATCACCAGCGGCGCCATCGC
CGTGCCGGACTGA

Upstream 100 bases:

>100_bases
CAGGCCCCGGGGACTGGGCCGTCCGCCGGGGCACCCCACCAGGGCACTGTTCGCAAACCGCCATTCTAAAAGATATTGAG
AATGGTTCGTATTGGAATTT

Downstream 100 bases:

>100_bases
CCTGCCGCAAACCCCCGCGGCGCGCGCGGTTGCTTGGAGCCTGCGCCGCGGACGACCGGTAGAGTGGGGGGGCCGCCACT
TCGAGGAATGCCCATGTCCG

Product: putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane

Products: NA

Alternate protein names: 3HB-oligomer hydrolase; 3HBOH [H]

Number of amino acids: Translated: 750; Mature: 750

Protein sequence:

>750_residues
MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSCGGGGSGAAVDYDFNVRPSYL
NDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTAEELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATS
GEGMVAGTEAIAYSDDGSGRRNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH
DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKDWGLSTLQAVEFAFYVLNERF
GDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDTRGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLID
YTTQAHLYQACAALAPSLASTPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL
HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGNGIPPTAGVQLVNDRSRGVPV
RDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGLDETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRR
VEGAASRLSYIEVTNAQHFDAFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA
ITAANVPPIAAMPVAADAVAITSGAIAVPD

Sequences:

>Translated_750_residues
MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSCGGGGSGAAVDYDFNVRPSYL
NDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTAEELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATS
GEGMVAGTEAIAYSDDGSGRRNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH
DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKDWGLSTLQAVEFAFYVLNERF
GDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDTRGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLID
YTTQAHLYQACAALAPSLASTPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL
HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGNGIPPTAGVQLVNDRSRGVPV
RDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGLDETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRR
VEGAASRLSYIEVTNAQHFDAFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA
ITAANVPPIAAMPVAADAVAITSGAIAVPD
>Mature_750_residues
MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSCGGGGSGAAVDYDFNVRPSYL
NDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTAEELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATS
GEGMVAGTEAIAYSDDGSGRRNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH
DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKDWGLSTLQAVEFAFYVLNERF
GDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDTRGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLID
YTTQAHLYQACAALAPSLASTPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL
HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGNGIPPTAGVQLVNDRSRGVPV
RDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGLDETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRR
VEGAASRLSYIEVTNAQHFDAFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA
ITAANVPPIAAMPVAADAVAITSGAIAVPD

Specific function: Participates in the degradation of poly-3- hydroxybutyrate (PHB). It works downstream of poly(3- hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB-oligomers) into 3HB-monomers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016582 [H]

Pfam domain/function: PF10605 3HBOH [H]

EC number: =3.1.1.22 [H]

Molecular weight: Translated: 77392; Mature: 77392

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSC
CCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHCCCEEEHHHHHHHHHHHHHHCC
GGGGSGAAVDYDFNVRPSYLNDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTA
CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCH
EELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATSGEGMVAGTEAIAYSDDGSGR
HHHHCCEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCC
RNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH
CEEEEEEECCCHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCC
DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKD
CCCCCEEEEEECCCCCEEECCCHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHH
WGLSTLQAVEFAFYVLNERFGDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCC
RGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLIDYTTQAHLYQACAALAPSLAS
CHHHCCEEECCCCCCCCCCCCEEEECCCEEEEECCEEEEECCHHHHHHHHHHHHCCHHHC
TPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL
CCHHHHHEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGN
EHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHEEEECCC
GIPPTAGVQLVNDRSRGVPVRDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGL
CCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
DETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRRVEGAASRLSYIEVTNAQHFD
HHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHH
AFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA
HHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCE
ITAANVPPIAAMPVAADAVAITSGAIAVPD
EEECCCCCCEECCCCCCEEEEECCEEECCC
>Mature Secondary Structure
MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSC
CCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHCCCEEEHHHHHHHHHHHHHHCC
GGGGSGAAVDYDFNVRPSYLNDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTA
CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCH
EELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATSGEGMVAGTEAIAYSDDGSGR
HHHHCCEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCC
RNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH
CEEEEEEECCCHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCC
DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKD
CCCCCEEEEEECCCCCEEECCCHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHH
WGLSTLQAVEFAFYVLNERFGDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDT
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCC
RGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLIDYTTQAHLYQACAALAPSLAS
CHHHCCEEECCCCCCCCCCCCEEEECCCEEEEECCEEEEECCHHHHHHHHHHHHCCHHHC
TPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL
CCHHHHHEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGN
EHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHEEEECCC
GIPPTAGVQLVNDRSRGVPVRDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGL
CCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
DETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRRVEGAASRLSYIEVTNAQHFD
HHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHH
AFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA
HHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCE
ITAANVPPIAAMPVAADAVAITSGAIAVPD
EEECCCCCCEECCCCCCEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA