| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611668
Identifier: 120611668
GI number: 120611668
Start: 3312368
End: 3314620
Strand: Reverse
Name: 120611668
Synonym: Aave_3005
Alternate gene names: NA
Gene position: 3314620-3312368 (Counterclockwise)
Preceding gene: 120611669
Following gene: 120611667
Centisome position: 61.92
GC content: 72.44
Gene sequence:
>2253_bases ATGGAATGTATGAAAGGCAGACCCACTGCCTGCCGGGCAGCGCTGCGGCGCACCGGTGGCGGATGCCCCCGGCGGGCGCG GATAGCCTCATACTCCGGCCACCCCAGAGAGGAGATCCCGCACATGACTGTCTTTAAAACCGCCCCCCTGCTCATCGCCG CCCTGGCCGCTTCCTCGTGCGGGGGCGGAGGCAGCGGCGCAGCGGTCGACTACGACTTCAACGTCCGCCCGTCGTACCTG AACGATCTGCGGCAGGCGAGCTACGACGGCGCGGGCAACGACCTGCTGACCGGCGGCCTCGGCCGCTCCGGCCTGCAGGA CGATTCGCCGCCGGGCTACGCGGGCAGCCAGCCCACGGCGGAGGAGTTGCGGCGAAATGCCATCTATGTGAACTATCGGG CGCTGGTGGACACGACTTCCGAAGGGGGCTACGGCAGGCTGTACGGCCCGAACGTGGACGCGCAGGGCCGTGCGACATCG GGCGAAGGCATGGTGGCCGGCACGGAAGCCATCGCCTATTCGGACGACGGCTCGGGGCGCCGCAATGTCACTCTGATGGT GCAGGTGCCGGATGCCTTCGACCGCACGCGCCCCTGCATCATCACCGCCACCTCGTCCGGCTCGCGCGGCATCTACGGCG GCATTCCCACGGGCGAATGGGGCCTCAAGCGCGGCTGCGCCGTGGCCTATACGGACAAGGGCACGGGCGCCGCGCCCCAT GACCTGCAGGCCGATACCGTCGCGCTGATCGACGGCACGCGCACCAGCGCCACGCTCGCGGGCACGCGCGCCGCCTTCGA CGCAGGCCTGTCGGCGGCGGACCTCGCGGCCTTCAACGGGGCCACGCCGCAGCGCCTGGCGTTCAAGCACGCGCATTCCG GGCAGAACCCGGAAAAGGACTGGGGCCTCTCCACCCTGCAGGCGGTCGAGTTCGCGTTCTACGTGCTCAACGAGCGCTTC GGCGACCGCTCGCCGGGCGGGCAGGCGCTGCGCACCTTCACGCCGGCCAACACGACGGTGATCGCCTCCAGCCTCTCGAA CGGCGGCGGCGCGGCGATCGCGGCGGCCGAGCAGGACACCCGAGGCCTCATCGACGGGGTGGCCGTGTCGGAGCCCTCGG TGCAGATGCCGGCCAACGCGGGCGTCACCGTGCAGCGCGGCGGGCGCACCGTCGCCGTGAACGGCCTCCCGCTGATCGAC TACACCACCCAGGCCCACCTCTACCAGGCCTGCGCCGCCCTCGCGCCCTCGCTGGCCTCCACGCCCTTCGCGGCGGCCTT CGCCGTCCGCTTCGCGGACCCGGCCTTCCCCGTGGCCGCCAACCGCTGTGCCGGCCTGAAGGCCCGGGGCCTGCTCTCGG CCGCCACCACGGCCGCCCAGGCCGAGGAGGCGCTGGCGCGCCTGACCGCCTATGGCTGGGAGCCCGAGTCGGGTGCGCTG CACGCCTCGCTCGCGGCGTTCGAAGTGGCTCCGTCGATCGCCGTCACCTATGCCAACGCGCTCTCGCGCGCGAGCGTCCA GGACCGGCTGTGCGGCTACAGCTTCGCCACCACGTCGGCCATCGGCGCGGTGCAGCCCACGCCCGCCGCGGTGACGAACA CCCTGTTCGCCACCGGCAACGGCATCCCGCCCACCGCCGGCGTGCAGCTCGTCAACGACCGCAGCCGAGGCGTGCCGGTG CGCGACCTGTTCTCGTCCAATGCCGCGGGCGTGCCCACCTGGAACCTGGAAGGCGCGCTCTGCCTGCGCAGCCTCGTGAC GGGCACCGACGCGGCCGCCCGGCGCCTGCAGTCCGGCCTCGACGAAACCCGCCGCACCGGCAACCTGCAGGGCAAGCCCG CCATCATCGTGCACGGCCGCGACGACGCGCTCATCCCGGTCAACCACACCTCGCGTCCCTACGCCGCCCTGAACCGGCGC GTGGAGGGCGCCGCCAGCCGCCTGAGCTACATCGAGGTCACGAACGCCCAGCATTTCGATGCCTTCATCGGCCTGCCGGC CACGCTGCCGGGCTACGACAGCCGCTACATCCCCCTGCACCTGTACCTCAACCGCGCGCTCGATGCCATGTACGCGCACC TGGTGAACGGCGAGCCGCTGCCGGCCAGCCAAGTGGTGCGCACCGTGCCGCGCGGCGGCACGCCGGGCAGCGCCCCCGCG ATCACCGCGGCGAACGTGCCACCCATCGCGGCCATGCCCGTCGCTGCCGATGCCGTCGCCATCACCAGCGGCGCCATCGC CGTGCCGGACTGA
Upstream 100 bases:
>100_bases CAGGCCCCGGGGACTGGGCCGTCCGCCGGGGCACCCCACCAGGGCACTGTTCGCAAACCGCCATTCTAAAAGATATTGAG AATGGTTCGTATTGGAATTT
Downstream 100 bases:
>100_bases CCTGCCGCAAACCCCCGCGGCGCGCGCGGTTGCTTGGAGCCTGCGCCGCGGACGACCGGTAGAGTGGGGGGGCCGCCACT TCGAGGAATGCCCATGTCCG
Product: putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane
Products: NA
Alternate protein names: 3HB-oligomer hydrolase; 3HBOH [H]
Number of amino acids: Translated: 750; Mature: 750
Protein sequence:
>750_residues MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSCGGGGSGAAVDYDFNVRPSYL NDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTAEELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATS GEGMVAGTEAIAYSDDGSGRRNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKDWGLSTLQAVEFAFYVLNERF GDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDTRGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLID YTTQAHLYQACAALAPSLASTPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGNGIPPTAGVQLVNDRSRGVPV RDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGLDETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRR VEGAASRLSYIEVTNAQHFDAFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA ITAANVPPIAAMPVAADAVAITSGAIAVPD
Sequences:
>Translated_750_residues MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSCGGGGSGAAVDYDFNVRPSYL NDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTAEELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATS GEGMVAGTEAIAYSDDGSGRRNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKDWGLSTLQAVEFAFYVLNERF GDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDTRGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLID YTTQAHLYQACAALAPSLASTPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGNGIPPTAGVQLVNDRSRGVPV RDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGLDETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRR VEGAASRLSYIEVTNAQHFDAFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA ITAANVPPIAAMPVAADAVAITSGAIAVPD >Mature_750_residues MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSCGGGGSGAAVDYDFNVRPSYL NDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTAEELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATS GEGMVAGTEAIAYSDDGSGRRNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKDWGLSTLQAVEFAFYVLNERF GDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDTRGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLID YTTQAHLYQACAALAPSLASTPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGNGIPPTAGVQLVNDRSRGVPV RDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGLDETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRR VEGAASRLSYIEVTNAQHFDAFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA ITAANVPPIAAMPVAADAVAITSGAIAVPD
Specific function: Participates in the degradation of poly-3- hydroxybutyrate (PHB). It works downstream of poly(3- hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB-oligomers) into 3HB-monomers [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016582 [H]
Pfam domain/function: PF10605 3HBOH [H]
EC number: =3.1.1.22 [H]
Molecular weight: Translated: 77392; Mature: 77392
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSC CCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHCCCEEEHHHHHHHHHHHHHHCC GGGGSGAAVDYDFNVRPSYLNDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTA CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCH EELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATSGEGMVAGTEAIAYSDDGSGR HHHHCCEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCC RNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH CEEEEEEECCCHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCC DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKD CCCCCEEEEEECCCCCEEECCCHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHH WGLSTLQAVEFAFYVLNERFGDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDT CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCC RGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLIDYTTQAHLYQACAALAPSLAS CHHHCCEEECCCCCCCCCCCCEEEECCCEEEEECCEEEEECCHHHHHHHHHHHHCCHHHC TPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL CCHHHHHEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGN EHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHEEEECCC GIPPTAGVQLVNDRSRGVPVRDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGL CCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH DETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRRVEGAASRLSYIEVTNAQHFD HHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHH AFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA HHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCE ITAANVPPIAAMPVAADAVAITSGAIAVPD EEECCCCCCEECCCCCCEEEEECCEEECCC >Mature Secondary Structure MECMKGRPTACRAALRRTGGGCPRRARIASYSGHPREEIPHMTVFKTAPLLIAALAASSC CCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHCCCEEEHHHHHHHHHHHHHHCC GGGGSGAAVDYDFNVRPSYLNDLRQASYDGAGNDLLTGGLGRSGLQDDSPPGYAGSQPTA CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCH EELRRNAIYVNYRALVDTTSEGGYGRLYGPNVDAQGRATSGEGMVAGTEAIAYSDDGSGR HHHHCCEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCC RNVTLMVQVPDAFDRTRPCIITATSSGSRGIYGGIPTGEWGLKRGCAVAYTDKGTGAAPH CEEEEEEECCCHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCC DLQADTVALIDGTRTSATLAGTRAAFDAGLSAADLAAFNGATPQRLAFKHAHSGQNPEKD CCCCCEEEEEECCCCCEEECCCHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHH WGLSTLQAVEFAFYVLNERFGDRSPGGQALRTFTPANTTVIASSLSNGGGAAIAAAEQDT CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCC RGLIDGVAVSEPSVQMPANAGVTVQRGGRTVAVNGLPLIDYTTQAHLYQACAALAPSLAS CHHHCCEEECCCCCCCCCCCCEEEECCCEEEEECCEEEEECCHHHHHHHHHHHHCCHHHC TPFAAAFAVRFADPAFPVAANRCAGLKARGLLSAATTAAQAEEALARLTAYGWEPESGAL CCHHHHHEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE HASLAAFEVAPSIAVTYANALSRASVQDRLCGYSFATTSAIGAVQPTPAAVTNTLFATGN EHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHEEEECCC GIPPTAGVQLVNDRSRGVPVRDLFSSNAAGVPTWNLEGALCLRSLVTGTDAAARRLQSGL CCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH DETRRTGNLQGKPAIIVHGRDDALIPVNHTSRPYAALNRRVEGAASRLSYIEVTNAQHFD HHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCHHH AFIGLPATLPGYDSRYIPLHLYLNRALDAMYAHLVNGEPLPASQVVRTVPRGGTPGSAPA HHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCE ITAANVPPIAAMPVAADAVAITSGAIAVPD EEECCCCCCEECCCCCCEEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA