| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611564
Identifier: 120611564
GI number: 120611564
Start: 3196310
End: 3197980
Strand: Reverse
Name: 120611564
Synonym: Aave_2900
Alternate gene names: NA
Gene position: 3197980-3196310 (Counterclockwise)
Preceding gene: 120611565
Following gene: 120611563
Centisome position: 59.74
GC content: 66.43
Gene sequence:
>1671_bases ATGGCGAAGAGCCCGAAGCAATTCCTGGCCGACCTGGCGTCGCTCGCCGATGGCCTGCGCCGCCAGATCGACGCCAACCT CGACGGCTGGGACATGAGTCCCGAGGCCATCGCCGAACGGCGCCGCAAGGTCTGCGATCCGGTGAGCGGCTACGAGTACT GGGACCGCAACTACTTCCCGCACTACGGCCGCGCCGAGCCCAGTGCGCTGCATCTCTACCTCTACAAGCGCCTGCCCGAG ATCATCGCAGCGAAGTCGGGCCAGCGCGATGCACTGGCGGCGCCCCGCGGCGAGGCGAAGTCCACGAAGATCAGCATGAG CTTCGTGGCCTGGTGCGTGGTCACGGAAAAGCTCTGGTATCCGATCATCGTGATGGATGCCTTCGAGCAGGCGGCGGAGA TGCTGGAGGCGATCAAGGCGGAGCTGGAAGCCAACCCGCGCATCGCGGGCGACTTCCCCGAGGCGTGCGGGCAGGGCCGC GTCTGGCGCGCGGGCGTCATCGTCACGCGCAACGGCCGGAAGGTGGAGGCCTTCGGCTCGGCCAAGAAGATCCGGGGCCG ACGTCATGGAGCACATCGCCCCGACCTGGCGGTGATGGACGACATCGAAAACGACGAAAACGTCACCACGCCAGCGCAGC GCGACAAGCTGCAGAAGTTCGTCACCGCGAGCGTCCTCAACCTGGGGCCGCCGGACGATTCGATGCACGCCATCCTCGTC GGTACGGTGCTGCACTACGACTCGGTGCTGGCGCGGTTTCTGAAGAATCCGCTGTGGAACCGCAAGGTTTTTAAGGCCGT CTTGCAGTGGCCGGAGAACATGCACCTGTGGGAGCAGTTCGAGGGACTGCTGCTGGGAGCCGACACGCCGCAGCGCGGTG AGGCCGAGGCCATGGCGCTGTACCGCCAGCACCAGGCAGAGATGGACAAGGGCGCGGTGGTGAGCTGGCCCGCGCTGCGC CCGCTGGTCAAGCTGATGATCCGCCGTGCGCGCGAAGGGCACGCGGCATTCGACTCGGAGCAGCAGAACGACCCGGTGGC GGGCGAGGATGCGCCGTTCGCGAACAGCATCCGCTTCTGGGTCAACCGCGCGGCCGAGTGGATCTTCTACGGTGCCTGCG ATCCCAGCTTGGGAAGGGCAGGGAACAGCCGCGATCCGAGCGCGATAGGCGTGGGTGGCTACAACCGCGAAACGGGCGTG CTCGATGTGGTCGAGGCCGCCATCAAGAAGCGCGTGCCTGACCGGATCATCAGCGATGTGATCGAGATGCAACGCGAGTA CGGCTGCGTCGTGTGGGGCTTCGAGTCCGTCCAGTTCCAGGAATTCCTGCGCACCGAGCTGGTCAAGCGCAGCGCGCTGC TCGGGGTGCCTGTGCCGGCCCGAGGCCTGATCCCCATCAGCGACAAGCTGCTGCGCATCGAGAGCCTGCAGCCGCACATG CACAACGGCTTGCTCCGGTTGCACAGCAGCCAGACCACGCTGATCGATCAGTTCCGCCACTTCCCCAAGGCCGATCACGA CGACGGCCCCGACATGGTCCAGATGCTATGGATGCTGGCCGTGACGGGTGGCATGGCTGCAGCCGCTCAGGGCGGCAGCT CCCGCCAACCCCAATCCGCGCGAGAGCGCTTCGCGCGCCAGGCGGCGCGCATGTTCAGAAAGCAACGATGA
Upstream 100 bases:
>100_bases CGCTTCGTCACGTTCGCGCAGGTACGCTTCCCGCAGCACCTGCAGGCGGTCGCTGAGATGCTGGAGCCATTCGGCGAAGA ACTCGCGAAGGTGCGCTGAC
Downstream 100 bases:
>100_bases TGACCGAAGCCCAATATGCCCTCCTGCTCATCCGCGGCGCTATCGCGGGCCTGCCCGAAGCCGACCGCCAAGGTGTGGAG CTGGCCGCTGCCAAGCTGCG
Product: phage protein
Products: NA
Alternate protein names: Phage Protein; Phage Protein C-Terminal
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MAKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIAERRRKVCDPVSGYEYWDRNYFPHYGRAEPSALHLYLYKRLPE IIAAKSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWYPIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGR VWRAGVIVTRNGRKVEAFGSAKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV GTVLHYDSVLARFLKNPLWNRKVFKAVLQWPENMHLWEQFEGLLLGADTPQRGEAEAMALYRQHQAEMDKGAVVSWPALR PLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFWVNRAAEWIFYGACDPSLGRAGNSRDPSAIGVGGYNRETGV LDVVEAAIKKRVPDRIISDVIEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSARERFARQAARMFRKQR
Sequences:
>Translated_556_residues MAKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIAERRRKVCDPVSGYEYWDRNYFPHYGRAEPSALHLYLYKRLPE IIAAKSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWYPIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGR VWRAGVIVTRNGRKVEAFGSAKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV GTVLHYDSVLARFLKNPLWNRKVFKAVLQWPENMHLWEQFEGLLLGADTPQRGEAEAMALYRQHQAEMDKGAVVSWPALR PLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFWVNRAAEWIFYGACDPSLGRAGNSRDPSAIGVGGYNRETGV LDVVEAAIKKRVPDRIISDVIEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSARERFARQAARMFRKQR >Mature_555_residues AKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIAERRRKVCDPVSGYEYWDRNYFPHYGRAEPSALHLYLYKRLPEI IAAKSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWYPIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGRV WRAGVIVTRNGRKVEAFGSAKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILVG TVLHYDSVLARFLKNPLWNRKVFKAVLQWPENMHLWEQFEGLLLGADTPQRGEAEAMALYRQHQAEMDKGAVVSWPALRP LVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFWVNRAAEWIFYGACDPSLGRAGNSRDPSAIGVGGYNRETGVL DVVEAAIKKRVPDRIISDVIEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHMH NGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSARERFARQAARMFRKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62413; Mature: 62282
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIAERRRKVCDPVSGYEYWDRNYFP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCC HYGRAEPSALHLYLYKRLPEIIAAKSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH PIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGRVWRAGVIVTRNGRKVEAFGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEECCCC AKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GTVLHYDSVLARFLKNPLWNRKVFKAVLQWPENMHLWEQFEGLLLGADTPQRGEAEAMAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCEEEECCCCCCCHHHHHHH YRQHQAEMDKGAVVSWPALRPLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFW HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH VNRAAEWIFYGACDPSLGRAGNSRDPSAIGVGGYNRETGVLDVVEAAIKKRVPDRIISDV HHHHHHEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHH IEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHH HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSA HCCCEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHH RERFARQAARMFRKQR HHHHHHHHHHHHHHCC >Mature Secondary Structure AKSPKQFLADLASLADGLRRQIDANLDGWDMSPEAIAERRRKVCDPVSGYEYWDRNYFP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCC HYGRAEPSALHLYLYKRLPEIIAAKSGQRDALAAPRGEAKSTKISMSFVAWCVVTEKLWY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHH PIIVMDAFEQAAEMLEAIKAELEANPRIAGDFPEACGQGRVWRAGVIVTRNGRKVEAFGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEECCCC AKKIRGRRHGAHRPDLAVMDDIENDENVTTPAQRDKLQKFVTASVLNLGPPDDSMHAILV HHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GTVLHYDSVLARFLKNPLWNRKVFKAVLQWPENMHLWEQFEGLLLGADTPQRGEAEAMAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHCCCEEEECCCCCCCHHHHHHH YRQHQAEMDKGAVVSWPALRPLVKLMIRRAREGHAAFDSEQQNDPVAGEDAPFANSIRFW HHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH VNRAAEWIFYGACDPSLGRAGNSRDPSAIGVGGYNRETGVLDVVEAAIKKRVPDRIISDV HHHHHHEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHH IEMQREYGCVVWGFESVQFQEFLRTELVKRSALLGVPVPARGLIPISDKLLRIESLQPHM HHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHH HNGLLRLHSSQTTLIDQFRHFPKADHDDGPDMVQMLWMLAVTGGMAAAAQGGSSRQPQSA HCCCEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHH RERFARQAARMFRKQR HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA