| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611563
Identifier: 120611563
GI number: 120611563
Start: 3194641
End: 3196128
Strand: Reverse
Name: 120611563
Synonym: Aave_2899
Alternate gene names: NA
Gene position: 3196128-3194641 (Counterclockwise)
Preceding gene: 120611564
Following gene: 120611562
Centisome position: 59.71
GC content: 65.59
Gene sequence:
>1488_bases ATGCGCATGTGGGACCGATTTAAAGCATGGGCCGGCGCGCAGCTCGAGCCCGTGGCCACGGCTGCGCCCGAAGCCACGAG CCCGGTGCGTGAGGCGGCATCTGCCCAGGGCCAGGGCGATGGCGATCACTGGCGGCGCCTTGGTGGTGACCTCGCGAGCA TGAACGACCGCGACCTGGCGCCCATGGCACAGGACCGCATGCAGAAGCTCGCCGAGTACCTGTGGCAGAGCAACCTGCTC GCCAACCGCCTGGTGGAGTTGCCGCTGGCCTACCTGCTCGCGGAGGGGGTCACGCTCCAGTGCAAGAATGAGGAGCACCA GAAGCTGCTCAATGCCTTCTGGTCGGACCCCATCAACAACTGGCCGCTCAAGCTGCAGTCGCGCGTGCGGGCCTACAGCC TGCACGGTGAGCAGTGCTACATCGCCCATGTGCGCGATGGTGACGGCTTCGTCCGCCTCGGGTACCTGGACCCTCGTCAG ATCGCTACCGTGGTCAACGACCCCGCGAATCCCGAGCAGCCCATCGGCGTGGTCACCAAGCGAGACAGCCGTGGCCGCGT GTACAAGTACCGCGTCATCGTGCTCGGCGACGACGACAAGCTCTTCGACGCTAACACTGTGCGCATCCGAACTGAGGACT TCGCGGACGGCGACTGCCTGCTCTACCAGGTCAACAAGCTGCCCAGCGGCAGCCGAGGCCGCAGCGATCTGCTGGGCCAG ATGGACTGGCTGGACGCCTATGACGACTTCCTCTTCAGCGAGCTGGATCGCATCGGATACCTGCGCTCGTTCGTGTGGGA TGTGACGATGACCGGCGCCGACGAGGCGGCTGTCACGAAGTTCGAGAAGACGTTCGTTCCGCCCGGCCCCAACAGCACGT TTGTCCACAACGACACGGTCAAGCTGGAGGCCAAGACGCCCGATCTGCAGGCAGCGGACACCACCCAGAGCGCGCGGTTG CTGCGCAACCATGTGCTGGGAGGCAGCACCACGCCGGAACACTGGTTCGGCGGCGGCGGGGATGTGAACCGCGCAGCGGC CACGGAGATGGGCGAGCCCACCTTCAAGATGTACAGCATGCGGCAGAGCGTGCTCAAGCTGATGCTCGAAGAGATCGGCC GCTACGTGCTGTGGTGCAAGGCTCAGGCCCGCGGCGAGACACCCGACTGGGCCAGCGACGAATGGCAGGTCACGGCGGTC TTCCCCGAGCTGCTGAATCGCGACGTCACCAAGTTCGCGGCCGCGATGCAGTCGGTGGCCTCCTCCGTCATCCTGATGAT CGAGGCCGGCCTGCTGACGGAGGAGACCGGGCTCAAGATCGTGGCGGACGTGGCGCAGCGATTCGGGCAGGACTTCGACG CCAAGACGGAGCTGAAATCAGCGCGGAAAGAGCGCGATGACCGCAAGCGAGCCCGCGCTGCTGAGGACGTCTTCAAATCA GGCGCAGATCCGCACGCGGAACAGGCCCAAGGCCAGGGCCAGGAATAG
Upstream 100 bases:
>100_bases TGGCCGCTGCCAAGCTGCGCGAGGTGGTGCTGCACCACAACGACCACGGCCAGTTGGCGCTAGCCCTGGTGGGCGCAGAG CAGGATGCGGAGGCCTGAGC
Downstream 100 bases:
>100_bases AAAAAAGACGGGCGACCCTGGAACTGTGCTGTCACACCGCTCCAGAACCCCAACCTGCAGAACACGCTGCAAGCCGGCAA GGCCCGCCACTCTCGCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MRMWDRFKAWAGAQLEPVATAAPEATSPVREAASAQGQGDGDHWRRLGGDLASMNDRDLAPMAQDRMQKLAEYLWQSNLL ANRLVELPLAYLLAEGVTLQCKNEEHQKLLNAFWSDPINNWPLKLQSRVRAYSLHGEQCYIAHVRDGDGFVRLGYLDPRQ IATVVNDPANPEQPIGVVTKRDSRGRVYKYRVIVLGDDDKLFDANTVRIRTEDFADGDCLLYQVNKLPSGSRGRSDLLGQ MDWLDAYDDFLFSELDRIGYLRSFVWDVTMTGADEAAVTKFEKTFVPPGPNSTFVHNDTVKLEAKTPDLQAADTTQSARL LRNHVLGGSTTPEHWFGGGGDVNRAAATEMGEPTFKMYSMRQSVLKLMLEEIGRYVLWCKAQARGETPDWASDEWQVTAV FPELLNRDVTKFAAAMQSVASSVILMIEAGLLTEETGLKIVADVAQRFGQDFDAKTELKSARKERDDRKRARAAEDVFKS GADPHAEQAQGQGQE
Sequences:
>Translated_495_residues MRMWDRFKAWAGAQLEPVATAAPEATSPVREAASAQGQGDGDHWRRLGGDLASMNDRDLAPMAQDRMQKLAEYLWQSNLL ANRLVELPLAYLLAEGVTLQCKNEEHQKLLNAFWSDPINNWPLKLQSRVRAYSLHGEQCYIAHVRDGDGFVRLGYLDPRQ IATVVNDPANPEQPIGVVTKRDSRGRVYKYRVIVLGDDDKLFDANTVRIRTEDFADGDCLLYQVNKLPSGSRGRSDLLGQ MDWLDAYDDFLFSELDRIGYLRSFVWDVTMTGADEAAVTKFEKTFVPPGPNSTFVHNDTVKLEAKTPDLQAADTTQSARL LRNHVLGGSTTPEHWFGGGGDVNRAAATEMGEPTFKMYSMRQSVLKLMLEEIGRYVLWCKAQARGETPDWASDEWQVTAV FPELLNRDVTKFAAAMQSVASSVILMIEAGLLTEETGLKIVADVAQRFGQDFDAKTELKSARKERDDRKRARAAEDVFKS GADPHAEQAQGQGQE >Mature_495_residues MRMWDRFKAWAGAQLEPVATAAPEATSPVREAASAQGQGDGDHWRRLGGDLASMNDRDLAPMAQDRMQKLAEYLWQSNLL ANRLVELPLAYLLAEGVTLQCKNEEHQKLLNAFWSDPINNWPLKLQSRVRAYSLHGEQCYIAHVRDGDGFVRLGYLDPRQ IATVVNDPANPEQPIGVVTKRDSRGRVYKYRVIVLGDDDKLFDANTVRIRTEDFADGDCLLYQVNKLPSGSRGRSDLLGQ MDWLDAYDDFLFSELDRIGYLRSFVWDVTMTGADEAAVTKFEKTFVPPGPNSTFVHNDTVKLEAKTPDLQAADTTQSARL LRNHVLGGSTTPEHWFGGGGDVNRAAATEMGEPTFKMYSMRQSVLKLMLEEIGRYVLWCKAQARGETPDWASDEWQVTAV FPELLNRDVTKFAAAMQSVASSVILMIEAGLLTEETGLKIVADVAQRFGQDFDAKTELKSARKERDDRKRARAAEDVFKS GADPHAEQAQGQGQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55337; Mature: 55337
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMWDRFKAWAGAQLEPVATAAPEATSPVREAASAQGQGDGDHWRRLGGDLASMNDRDLA CCHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHCCCCCCCC PMAQDRMQKLAEYLWQSNLLANRLVELPLAYLLAEGVTLQCKNEEHQKLLNAFWSDPINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCC WPLKLQSRVRAYSLHGEQCYIAHVRDGDGFVRLGYLDPRQIATVVNDPANPEQPIGVVTK CCHHHHHHHHHEEECCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEE RDSRGRVYKYRVIVLGDDDKLFDANTVRIRTEDFADGDCLLYQVNKLPSGSRGRSDLLGQ CCCCCCEEEEEEEEECCCCCEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHH MDWLDAYDDFLFSELDRIGYLRSFVWDVTMTGADEAAVTKFEKTFVPPGPNSTFVHNDTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCEEECCEE KLEAKTPDLQAADTTQSARLLRNHVLGGSTTPEHWFGGGGDVNRAAATEMGEPTFKMYSM EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHH RQSVLKLMLEEIGRYVLWCKAQARGETPDWASDEWQVTAVFPELLNRDVTKFAAAMQSVA HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHH SSVILMIEAGLLTEETGLKIVADVAQRFGQDFDAKTELKSARKERDDRKRARAAEDVFKS HHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GADPHAEQAQGQGQE CCCCCHHHHCCCCCC >Mature Secondary Structure MRMWDRFKAWAGAQLEPVATAAPEATSPVREAASAQGQGDGDHWRRLGGDLASMNDRDLA CCHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHCCCCCCCC PMAQDRMQKLAEYLWQSNLLANRLVELPLAYLLAEGVTLQCKNEEHQKLLNAFWSDPINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCC WPLKLQSRVRAYSLHGEQCYIAHVRDGDGFVRLGYLDPRQIATVVNDPANPEQPIGVVTK CCHHHHHHHHHEEECCCEEEEEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEE RDSRGRVYKYRVIVLGDDDKLFDANTVRIRTEDFADGDCLLYQVNKLPSGSRGRSDLLGQ CCCCCCEEEEEEEEECCCCCEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHH MDWLDAYDDFLFSELDRIGYLRSFVWDVTMTGADEAAVTKFEKTFVPPGPNSTFVHNDTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCEEECCEE KLEAKTPDLQAADTTQSARLLRNHVLGGSTTPEHWFGGGGDVNRAAATEMGEPTFKMYSM EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHH RQSVLKLMLEEIGRYVLWCKAQARGETPDWASDEWQVTAVFPELLNRDVTKFAAAMQSVA HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEECHHHHCCHHHHHHHHHHHHH SSVILMIEAGLLTEETGLKIVADVAQRFGQDFDAKTELKSARKERDDRKRARAAEDVFKS HHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GADPHAEQAQGQGQE CCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA