| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611448
Identifier: 120611448
GI number: 120611448
Start: 3056725
End: 3057747
Strand: Direct
Name: 120611448
Synonym: Aave_2784
Alternate gene names: NA
Gene position: 3056725-3057747 (Clockwise)
Preceding gene: 120611446
Following gene: 120611454
Centisome position: 57.11
GC content: 67.06
Gene sequence:
>1023_bases ATGGCGCAGCACGGCCGCACCGTCTTTGCCCGGCTGCAGAGCCTGCCCGTGGCAGACCGGCGCTGGTTCCACTGGAGAAT TTCCAGCAACCACTGCTTCGACCGTGTGGTCCTGACCAACGCGGGCGAGCTGCTCCTTGCGGAACCGACACCCCGCATGA CCGTGGTGGCACGTCTGCCTGCGGGTGAATGGCGGAACCTGGACGGCCGGGCCATCGACCAGGACGGTCTGGCTTTCACT CTGGACAAGGAGACGAACGAGGTCGAGATCGCCCATTCGATCCCCTACTCCGCGCCCGCTGCCGCCACCACGGCGTGGCA GTGGGTTTTCGACAGGCCGCAGGAAGCCGACCTGCCAAGGATCTCCGTGCTCCGCGGAGTGGCCGGCCAGCCGGAGACCA CCCATTGGATCGTCTGCAGGCAGCACCCCGTGGAAACGCTGGCTTCGCACTTCGCGGAGGCATTGCAGGCAAGAATTCAA GCCGACTGCCCCATGCCGCACTGGACATGGGCCGTCGTGCCCGTGGCCAATCCGGAAGGCTGCCGCCTCGGCACGTCCCG GCTGAACGGGCAAGGGATCGACATGAACCGGTGCTGGGGCGTGCCGGGGCAACCGAGGGAGGTAGGCCACCTGCTCGATG GCATGAGGGAATTGGGCTGCCACTTCTTCCTGGATGTCCATGCCGATGAGCAGTGCACGCAGCCCTACCTGCACCTGGGA GCGGCGAACGCGGCTCCTGCGTCGCCGGCGGCGCAGCGCGAGCGCGCGTTCAAGCTGGCGCTCGAACGTGCCCTCGGTGG TGTACCGCTCGCGACCTACGACGAAGCTCCAGGCAGGCTCACGCGTGGTCTGGGCGCCTACCACGTCCACGAAACCCATG GCTGCCCCGCGATCGTGCTGGAGATCCCGATGCAGCGGGACGTGATGGCCGAACCGCTCGCAAGCGACACGCTCGCCCGG ATCGGTGAACTGGCCGATGGCGTTTACAGGGCGATCTGCGTCACCAGTGGTACGCACCGCTGA
Upstream 100 bases:
>100_bases GGCAACGTGGTTTCCATAGCGCTTTCCGAGTCCGCGCAACACAATAGGACGTATCGTCATGGTTTCCAATGGACTTTGCT TCGATGGCACCGCATCACAC
Downstream 100 bases:
>100_bases GACGTTCACGGACTGCGCGGCTCAAGGCGCCTCCCTGGGCAGACCATCCTGCTTGCGCGGCCCGCTCCGCTCGCAGCAGC GGGCGAGGAAGTCCAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc-Carboxypeptidase; Zinc Carboxypeptidase Domain-Containing Protein; Zinc Carboxypeptidase Family Protein; Zinc Carboxypeptidase; Carboxypeptidase; Carboxypeptidase Zn Dependent; M14 Family Peptidase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAQHGRTVFARLQSLPVADRRWFHWRISSNHCFDRVVLTNAGELLLAEPTPRMTVVARLPAGEWRNLDGRAIDQDGLAFT LDKETNEVEIAHSIPYSAPAAATTAWQWVFDRPQEADLPRISVLRGVAGQPETTHWIVCRQHPVETLASHFAEALQARIQ ADCPMPHWTWAVVPVANPEGCRLGTSRLNGQGIDMNRCWGVPGQPREVGHLLDGMRELGCHFFLDVHADEQCTQPYLHLG AANAAPASPAAQRERAFKLALERALGGVPLATYDEAPGRLTRGLGAYHVHETHGCPAIVLEIPMQRDVMAEPLASDTLAR IGELADGVYRAICVTSGTHR
Sequences:
>Translated_340_residues MAQHGRTVFARLQSLPVADRRWFHWRISSNHCFDRVVLTNAGELLLAEPTPRMTVVARLPAGEWRNLDGRAIDQDGLAFT LDKETNEVEIAHSIPYSAPAAATTAWQWVFDRPQEADLPRISVLRGVAGQPETTHWIVCRQHPVETLASHFAEALQARIQ ADCPMPHWTWAVVPVANPEGCRLGTSRLNGQGIDMNRCWGVPGQPREVGHLLDGMRELGCHFFLDVHADEQCTQPYLHLG AANAAPASPAAQRERAFKLALERALGGVPLATYDEAPGRLTRGLGAYHVHETHGCPAIVLEIPMQRDVMAEPLASDTLAR IGELADGVYRAICVTSGTHR >Mature_339_residues AQHGRTVFARLQSLPVADRRWFHWRISSNHCFDRVVLTNAGELLLAEPTPRMTVVARLPAGEWRNLDGRAIDQDGLAFTL DKETNEVEIAHSIPYSAPAAATTAWQWVFDRPQEADLPRISVLRGVAGQPETTHWIVCRQHPVETLASHFAEALQARIQA DCPMPHWTWAVVPVANPEGCRLGTSRLNGQGIDMNRCWGVPGQPREVGHLLDGMRELGCHFFLDVHADEQCTQPYLHLGA ANAAPASPAAQRERAFKLALERALGGVPLATYDEAPGRLTRGLGAYHVHETHGCPAIVLEIPMQRDVMAEPLASDTLARI GELADGVYRAICVTSGTHR
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37444; Mature: 37313
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHGRTVFARLQSLPVADRRWFHWRISSNHCFDRVVLTNAGELLLAEPTPRMTVVARLP CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCEEEEEECC AGEWRNLDGRAIDQDGLAFTLDKETNEVEIAHSIPYSAPAAATTAWQWVFDRPQEADLPR CCCCCCCCCCEECCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCH ISVLRGVAGQPETTHWIVCRQHPVETLASHFAEALQARIQADCPMPHWTWAVVPVANPEG HHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC CRLGTSRLNGQGIDMNRCWGVPGQPREVGHLLDGMRELGCHFFLDVHADEQCTQPYLHLG CEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCCHHHEEC AANAAPASPAAQRERAFKLALERALGGVPLATYDEAPGRLTRGLGAYHVHETHGCPAIVL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCEEEECCCCCCEEEE EIPMQRDVMAEPLASDTLARIGELADGVYRAICVTSGTHR ECCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCC >Mature Secondary Structure AQHGRTVFARLQSLPVADRRWFHWRISSNHCFDRVVLTNAGELLLAEPTPRMTVVARLP CCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCCCEEEEEECC AGEWRNLDGRAIDQDGLAFTLDKETNEVEIAHSIPYSAPAAATTAWQWVFDRPQEADLPR CCCCCCCCCCEECCCCCEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCH ISVLRGVAGQPETTHWIVCRQHPVETLASHFAEALQARIQADCPMPHWTWAVVPVANPEG HHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC CRLGTSRLNGQGIDMNRCWGVPGQPREVGHLLDGMRELGCHFFLDVHADEQCTQPYLHLG CEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHCCHHHEEC AANAAPASPAAQRERAFKLALERALGGVPLATYDEAPGRLTRGLGAYHVHETHGCPAIVL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCCCEEEECCCCCCEEEE EIPMQRDVMAEPLASDTLARIGELADGVYRAICVTSGTHR ECCCCHHHHHCCHHHHHHHHHHHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA