| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611425
Identifier: 120611425
GI number: 120611425
Start: 3035035
End: 3035403
Strand: Reverse
Name: 120611425
Synonym: Aave_2761
Alternate gene names: NA
Gene position: 3035403-3035035 (Counterclockwise)
Preceding gene: 120611426
Following gene: 120611424
Centisome position: 56.71
GC content: 60.43
Gene sequence:
>369_bases ATGAAATCCATCCGCCAAGTTGCCAGCATCGCCTGCCTGGTGATCGCAACCTGCGCCCAGTCCGTTGCAATGGCTGCTCT GCCAAATATTCCGAAGCCCTCAGGCGGGGGCATCGGTGGTGCTGCAGTCCAGGACGGCGACTGGCTCGCGTTGATCGGAG CGTACTTCAAGGCGGGGTTCATCATCCTCGGATTGGTGCTCGGCTCCCTTGCCTTCTTCGCCGTCATCGGTGGGGCACTC AAGAAGTGGAAGGAGTACAGCGATGGCCGTGCCCACCTGGCCGACTTCAAGGAGTTCCTGATCGTGGGCATCGTGTTGGT GGTGTTCGTCGTCATGCTCGCCAACTACGCGATGCAGACGATGGCGTGA
Upstream 100 bases:
>100_bases AGGCGCTCATCGCGATCTGCGTCCTGCTGCTGGTCATTTTTTCGTTCCTTGCCTGGCTGTGAGTCAGGCCCGTTTTTGTT CTTGTCTTGAAGGGGGTCCC
Downstream 100 bases:
>100_bases GCGGACATGGCTGCAGACGACGTACGGCCGCCAGGCAGCAGCGCCGCGGCCCCATTGACCGATCGCGTGAACACCGAGCC GCCCATCATCAACGGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKSIRQVASIACLVIATCAQSVAMAALPNIPKPSGGGIGGAAVQDGDWLALIGAYFKAGFIILGLVLGSLAFFAVIGGAL KKWKEYSDGRAHLADFKEFLIVGIVLVVFVVMLANYAMQTMA
Sequences:
>Translated_122_residues MKSIRQVASIACLVIATCAQSVAMAALPNIPKPSGGGIGGAAVQDGDWLALIGAYFKAGFIILGLVLGSLAFFAVIGGAL KKWKEYSDGRAHLADFKEFLIVGIVLVVFVVMLANYAMQTMA >Mature_122_residues MKSIRQVASIACLVIATCAQSVAMAALPNIPKPSGGGIGGAAVQDGDWLALIGAYFKAGFIILGLVLGSLAFFAVIGGAL KKWKEYSDGRAHLADFKEFLIVGIVLVVFVVMLANYAMQTMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12720; Mature: 12720
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIRQVASIACLVIATCAQSVAMAALPNIPKPSGGGIGGAAVQDGDWLALIGAYFKAGF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH IILGLVLGSLAFFAVIGGALKKWKEYSDGRAHLADFKEFLIVGIVLVVFVVMLANYAMQT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MA CC >Mature Secondary Structure MKSIRQVASIACLVIATCAQSVAMAALPNIPKPSGGGIGGAAVQDGDWLALIGAYFKAGF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH IILGLVLGSLAFFAVIGGALKKWKEYSDGRAHLADFKEFLIVGIVLVVFVVMLANYAMQT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA