| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611424
Identifier: 120611424
GI number: 120611424
Start: 3034567
End: 3035028
Strand: Reverse
Name: 120611424
Synonym: Aave_2760
Alternate gene names: NA
Gene position: 3035028-3034567 (Counterclockwise)
Preceding gene: 120611425
Following gene: 120611423
Centisome position: 56.7
GC content: 65.8
Gene sequence:
>462_bases ATGGCTGCAGACGACGTACGGCCGCCAGGCAGCAGCGCCGCGGCCCCATTGACCGATCGCGTGAACACCGAGCCGCCCAT CATCAACGGGATGTCCGCCACGGAGGGCGGCTATGTGGCCGCGATCTCGCTTGCGTTCTTTCTCGTGGTCGGCTTCCTGC TGTACCTGGTCACAGGCTACTGGCATTTCATCTTCGCGAGTGCCGTCATCGGGCCGTTCGCTGTTCTGTGGCAGGCGTCT CTGTACCTCCAAACGGTGAAGCGCAACAAGCCCGAAGGCTGGTACGTGCAGGCGGCGCGCCTCTGGCTCGAAGACCATGG CCCGGGCCGCAAGCGCTACCTCCGGCACCACGGCTACTTCGAGCTCGGTCGGCGGCTCGACCTCGATGCCGCGTCCCCGA ATAGAAGTGCGGGCGCCGATCGCGCACGCAGCACCAGCACCCCAACTCCCCAACAGCCATGA
Upstream 100 bases:
>100_bases CCTGGCCGACTTCAAGGAGTTCCTGATCGTGGGCATCGTGTTGGTGGTGTTCGTCGTCATGCTCGCCAACTACGCGATGC AGACGATGGCGTGAGCGGAC
Downstream 100 bases:
>100_bases GCAGTGGTCAATTTCTCGACGCTCTTGCGTCCGAGCGGCGTCACAACGACCGACTCACGAAGACCATGGCGGGCGTGATC GCGCTCGGCATCGTCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAADDVRPPGSSAAAPLTDRVNTEPPIINGMSATEGGYVAAISLAFFLVVGFLLYLVTGYWHFIFASAVIGPFAVLWQAS LYLQTVKRNKPEGWYVQAARLWLEDHGPGRKRYLRHHGYFELGRRLDLDAASPNRSAGADRARSTSTPTPQQP
Sequences:
>Translated_153_residues MAADDVRPPGSSAAAPLTDRVNTEPPIINGMSATEGGYVAAISLAFFLVVGFLLYLVTGYWHFIFASAVIGPFAVLWQAS LYLQTVKRNKPEGWYVQAARLWLEDHGPGRKRYLRHHGYFELGRRLDLDAASPNRSAGADRARSTSTPTPQQP >Mature_152_residues AADDVRPPGSSAAAPLTDRVNTEPPIINGMSATEGGYVAAISLAFFLVVGFLLYLVTGYWHFIFASAVIGPFAVLWQASL YLQTVKRNKPEGWYVQAARLWLEDHGPGRKRYLRHHGYFELGRRLDLDAASPNRSAGADRARSTSTPTPQQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16816; Mature: 16685
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADDVRPPGSSAAAPLTDRVNTEPPIINGMSATEGGYVAAISLAFFLVVGFLLYLVTGY CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WHFIFASAVIGPFAVLWQASLYLQTVKRNKPEGWYVQAARLWLEDHGPGRKRYLRHHGYF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHH ELGRRLDLDAASPNRSAGADRARSTSTPTPQQP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AADDVRPPGSSAAAPLTDRVNTEPPIINGMSATEGGYVAAISLAFFLVVGFLLYLVTGY CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WHFIFASAVIGPFAVLWQASLYLQTVKRNKPEGWYVQAARLWLEDHGPGRKRYLRHHGYF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHH ELGRRLDLDAASPNRSAGADRARSTSTPTPQQP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA