| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611421
Identifier: 120611421
GI number: 120611421
Start: 3031263
End: 3032717
Strand: Reverse
Name: 120611421
Synonym: Aave_2757
Alternate gene names: NA
Gene position: 3032717-3031263 (Counterclockwise)
Preceding gene: 120611422
Following gene: 120611420
Centisome position: 56.66
GC content: 67.35
Gene sequence:
>1455_bases ATGGCCGTCAAGAGCAATCGATTCATCCCGGTCCTGGCGATCGCCGCCATTGCGATCGTCGGCACCATCTTCATGATGAA CCGCAACCCATCGCCCGCCTCGGAGCCGATGAAGGCTGTTCCGCTGCCCAAGACGGCAGGAGCCGACGAGGACACGCCGG CAGAGACCCTGGCCACGGTGGTCGCGTCGAACCGTGAACTGCGGCAGTGGGCGGAGCGTGTACTCCGCGAGAACGAGGAA CTGAGGCGGCAGCTCAAGCTGGGCGGAATTCCATCGCAGGCCGTCAGCGCAGAGCCGACTGCGGCTACAGGCACTCCAGA CCAACCAGCACCGCCCCGCCAGGCGAAGGCGGGAGGTGCTTCCAATTCGCCCGTCGACGTCATCGCGAATGCCTGGGGCA ATGCCACAGACACGCTCGGCTCCCTGGGCAGGCATCCGGCCGCACCCGTTGATGGCGCTGTAGCGCAGGACATGCCCGCG GATGGCGCCGCGGGCGCAGTGGGCTACAAGGTCGTGCCGCCGATGGGGTATGTTGCGCAGACACAAAGCAACCAGGGAAT GACCACCACGCGCTACGTCCGCAGCCCGGGCAGCGCGACGGCTGCAGCCGCAGCGGCCGCTGGCGCAGGTGGATCCACTG GCACGGGCAGTGCGACGCGCGCCGCCCAGGCGGCGTCCGAGAAGCCGGAGGCCGAGCCGTATTTCACGCTTCCGGAGAAT TCCACGCTCACGGGCGTGACCGCCATGACGAGCCTCATCGGCCGCGTTCCTGTCAACGGGCGGGTGACCGATCCGATGCA GTTCAAGGCGATCGTCGGGCGCGAGAACCTGGCGGCCAACGGCTGGGAGCTTCCGGAAGATCTGGCGGGCATGGTGGTGA CCGGCGTGGCGATCGGCGACATGGCGCTGTCCTGCACCGAGGGCAAGGTCCGCAGCATGACCTTCGTCTTCAACGACGGA ACGATCCGCACGATCTCCGCTCGCCGCTCGGGGTCATCCACCAACGGGGGAATCGGCTCTGGCAATACCAGCGATCTCGG ATTCATCAGCGACCTGCACGGCAATCCTTGCATCCAGGGCAAGTTTGTCACGAACGCCCCGGCCTACCTGACCGACATCG TGGGCGCCAAGGGCCTCGGCGTCGCCGCCGAGGCGCTGGCCCAGGCGCAAACGACGACGCTCAACCGCGGCGACTCGACA TCCTCGGCCGTTACCGGCAATGCGGGCAGCTTCGCCCTGGGCCGCATGGGATCGGGCGCGGCCGACGAGCTCACGCGCTG GCTCACCGAGCGCCTCAAAAGCAGCTTCGACGCCGTGGTCACGCCGGCCGGCCAGCAGCTGGTCGTACACCTGGACACCG AGGTTGCGATCGACAAGCCGGCGAACGCGCGAAAGATCCTCCACCGCACCCAATCCTCCAACGTCCTCTCCGGAGCCCGC TATGGCCTCGAATAG
Upstream 100 bases:
>100_bases CTCAGCACGGTCGCATCGGGCCTGCTGGAAGTGATACCGACACCACGGCCATCTACCTGGTGTGCGAACGCGCGTTCGAG TCCTGTCTGTGAGGTAGCCC
Downstream 100 bases:
>100_bases CCGCATCCTCGCTGTCCTATCGCTTTCCGCTACCCTGCTTGCCGGTTGCTCCGTCAGCGGTCCGAGAGAGAGCCCGCTCA AGGAGGTGACCGAAGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MAVKSNRFIPVLAIAAIAIVGTIFMMNRNPSPASEPMKAVPLPKTAGADEDTPAETLATVVASNRELRQWAERVLRENEE LRRQLKLGGIPSQAVSAEPTAATGTPDQPAPPRQAKAGGASNSPVDVIANAWGNATDTLGSLGRHPAAPVDGAVAQDMPA DGAAGAVGYKVVPPMGYVAQTQSNQGMTTTRYVRSPGSATAAAAAAAGAGGSTGTGSATRAAQAASEKPEAEPYFTLPEN STLTGVTAMTSLIGRVPVNGRVTDPMQFKAIVGRENLAANGWELPEDLAGMVVTGVAIGDMALSCTEGKVRSMTFVFNDG TIRTISARRSGSSTNGGIGSGNTSDLGFISDLHGNPCIQGKFVTNAPAYLTDIVGAKGLGVAAEALAQAQTTTLNRGDST SSAVTGNAGSFALGRMGSGAADELTRWLTERLKSSFDAVVTPAGQQLVVHLDTEVAIDKPANARKILHRTQSSNVLSGAR YGLE
Sequences:
>Translated_484_residues MAVKSNRFIPVLAIAAIAIVGTIFMMNRNPSPASEPMKAVPLPKTAGADEDTPAETLATVVASNRELRQWAERVLRENEE LRRQLKLGGIPSQAVSAEPTAATGTPDQPAPPRQAKAGGASNSPVDVIANAWGNATDTLGSLGRHPAAPVDGAVAQDMPA DGAAGAVGYKVVPPMGYVAQTQSNQGMTTTRYVRSPGSATAAAAAAAGAGGSTGTGSATRAAQAASEKPEAEPYFTLPEN STLTGVTAMTSLIGRVPVNGRVTDPMQFKAIVGRENLAANGWELPEDLAGMVVTGVAIGDMALSCTEGKVRSMTFVFNDG TIRTISARRSGSSTNGGIGSGNTSDLGFISDLHGNPCIQGKFVTNAPAYLTDIVGAKGLGVAAEALAQAQTTTLNRGDST SSAVTGNAGSFALGRMGSGAADELTRWLTERLKSSFDAVVTPAGQQLVVHLDTEVAIDKPANARKILHRTQSSNVLSGAR YGLE >Mature_483_residues AVKSNRFIPVLAIAAIAIVGTIFMMNRNPSPASEPMKAVPLPKTAGADEDTPAETLATVVASNRELRQWAERVLRENEEL RRQLKLGGIPSQAVSAEPTAATGTPDQPAPPRQAKAGGASNSPVDVIANAWGNATDTLGSLGRHPAAPVDGAVAQDMPAD GAAGAVGYKVVPPMGYVAQTQSNQGMTTTRYVRSPGSATAAAAAAAGAGGSTGTGSATRAAQAASEKPEAEPYFTLPENS TLTGVTAMTSLIGRVPVNGRVTDPMQFKAIVGRENLAANGWELPEDLAGMVVTGVAIGDMALSCTEGKVRSMTFVFNDGT IRTISARRSGSSTNGGIGSGNTSDLGFISDLHGNPCIQGKFVTNAPAYLTDIVGAKGLGVAAEALAQAQTTTLNRGDSTS SAVTGNAGSFALGRMGSGAADELTRWLTERLKSSFDAVVTPAGQQLVVHLDTEVAIDKPANARKILHRTQSSNVLSGARY GLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49536; Mature: 49405
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKSNRFIPVLAIAAIAIVGTIFMMNRNPSPASEPMKAVPLPKTAGADEDTPAETLATV CCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH VASNRELRQWAERVLRENEELRRQLKLGGIPSQAVSAEPTAATGTPDQPAPPRQAKAGGA HHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHCCCCC SNSPVDVIANAWGNATDTLGSLGRHPAAPVDGAVAQDMPADGAAGAVGYKVVPPMGYVAQ CCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCEEE TQSNQGMTTTRYVRSPGSATAAAAAAAGAGGSTGTGSATRAAQAASEKPEAEPYFTLPEN CCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCC STLTGVTAMTSLIGRVPVNGRVTDPMQFKAIVGRENLAANGWELPEDLAGMVVTGVAIGD CCCHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC MALSCTEGKVRSMTFVFNDGTIRTISARRSGSSTNGGIGSGNTSDLGFISDLHGNPCIQG EEEECCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC KFVTNAPAYLTDIVGAKGLGVAAEALAQAQTTTLNRGDSTSSAVTGNAGSFALGRMGSGA EEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCCCCH ADELTRWLTERLKSSFDAVVTPAGQQLVVHLDTEVAIDKPANARKILHRTQSSNVLSGAR HHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCHHHCHH YGLE CCCC >Mature Secondary Structure AVKSNRFIPVLAIAAIAIVGTIFMMNRNPSPASEPMKAVPLPKTAGADEDTPAETLATV CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH VASNRELRQWAERVLRENEELRRQLKLGGIPSQAVSAEPTAATGTPDQPAPPRQAKAGGA HHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCHHCCCCC SNSPVDVIANAWGNATDTLGSLGRHPAAPVDGAVAQDMPADGAAGAVGYKVVPPMGYVAQ CCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCEEE TQSNQGMTTTRYVRSPGSATAAAAAAAGAGGSTGTGSATRAAQAASEKPEAEPYFTLPEN CCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEECCCC STLTGVTAMTSLIGRVPVNGRVTDPMQFKAIVGRENLAANGWELPEDLAGMVVTGVAIGD CCCHHHHHHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC MALSCTEGKVRSMTFVFNDGTIRTISARRSGSSTNGGIGSGNTSDLGFISDLHGNPCIQG EEEECCCCCEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC KFVTNAPAYLTDIVGAKGLGVAAEALAQAQTTTLNRGDSTSSAVTGNAGSFALGRMGSGA EEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCCCCH ADELTRWLTERLKSSFDAVVTPAGQQLVVHLDTEVAIDKPANARKILHRTQSSNVLSGAR HHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCHHHCHH YGLE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA