| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611420
Identifier: 120611420
GI number: 120611420
Start: 3030791
End: 3031276
Strand: Reverse
Name: 120611420
Synonym: Aave_2756
Alternate gene names: NA
Gene position: 3031276-3030791 (Counterclockwise)
Preceding gene: 120611421
Following gene: 120611419
Centisome position: 56.63
GC content: 70.37
Gene sequence:
>486_bases ATGGCCTCGAATAGCCGCATCCTCGCTGTCCTATCGCTTTCCGCTACCCTGCTTGCCGGTTGCTCCGTCAGCGGTCCGAG AGAGAGCCCGCTCAAGGAGGTGACCGAAGGCAGTCCCACCGTCCTGGACGTCTACCGCGGCAAGGCCGCCGGCGGGGCGC CTGAGCGGTCCCTGGCCACGCCTCGGGACCGGCTGGAGCAGGACGCGCCCGCGCGCCCGCTCGCTGCCGACGATGGCCGG ACCCAGCGCTATTGGTCGGCCGTCGAGCCCATGCAGCAGCGCTTCGCCCGCCTGGCGAACCCCGATCTGGTGATGGTCGT GTACCCGCACTTGGCGAAGGGCAAGTACCCGGTGCCGGGATACGTCACGGTGTTCCCGATGTACGAGCAGACGGAGTACG CCCTCCCCGGCGAGGTGCAGGAAGATCTGCAGCGCGGCCGCGCCGCCGTCCAGGGCCGCTCGCCCGCCGAAGGAGGCCGT CGATGA
Upstream 100 bases:
>100_bases GTCGTACACCTGGACACCGAGGTTGCGATCGACAAGCCGGCGAACGCGCGAAAGATCCTCCACCGCACCCAATCCTCCAA CGTCCTCTCCGGAGCCCGCT
Downstream 100 bases:
>100_bases AGAAGTGGTTCGACGTGCTGCTTGGCCGCTCCTCGTCGGCAAGCGGGGAGCGCGCTGCGCCGTCGCCCGCAGCCTCCGGC GCGCCTGGCAAGCCGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Signal Recognition Particle GTPase; Signal Peptide
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MASNSRILAVLSLSATLLAGCSVSGPRESPLKEVTEGSPTVLDVYRGKAAGGAPERSLATPRDRLEQDAPARPLAADDGR TQRYWSAVEPMQQRFARLANPDLVMVVYPHLAKGKYPVPGYVTVFPMYEQTEYALPGEVQEDLQRGRAAVQGRSPAEGGR R
Sequences:
>Translated_161_residues MASNSRILAVLSLSATLLAGCSVSGPRESPLKEVTEGSPTVLDVYRGKAAGGAPERSLATPRDRLEQDAPARPLAADDGR TQRYWSAVEPMQQRFARLANPDLVMVVYPHLAKGKYPVPGYVTVFPMYEQTEYALPGEVQEDLQRGRAAVQGRSPAEGGR R >Mature_160_residues ASNSRILAVLSLSATLLAGCSVSGPRESPLKEVTEGSPTVLDVYRGKAAGGAPERSLATPRDRLEQDAPARPLAADDGRT QRYWSAVEPMQQRFARLANPDLVMVVYPHLAKGKYPVPGYVTVFPMYEQTEYALPGEVQEDLQRGRAAVQGRSPAEGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17438; Mature: 17307
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNSRILAVLSLSATLLAGCSVSGPRESPLKEVTEGSPTVLDVYRGKAAGGAPERSLAT CCCCCEEEEEEEHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC PRDRLEQDAPARPLAADDGRTQRYWSAVEPMQQRFARLANPDLVMVVYPHLAKGKYPVPG CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC YVTVFPMYEQTEYALPGEVQEDLQRGRAAVQGRSPAEGGRR EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ASNSRILAVLSLSATLLAGCSVSGPRESPLKEVTEGSPTVLDVYRGKAAGGAPERSLAT CCCCEEEEEEEHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC PRDRLEQDAPARPLAADDGRTQRYWSAVEPMQQRFARLANPDLVMVVYPHLAKGKYPVPG CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC YVTVFPMYEQTEYALPGEVQEDLQRGRAAVQGRSPAEGGRR EEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA