| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611401
Identifier: 120611401
GI number: 120611401
Start: 3007073
End: 3008452
Strand: Direct
Name: 120611401
Synonym: Aave_2737
Alternate gene names: NA
Gene position: 3007073-3008452 (Clockwise)
Preceding gene: 120611400
Following gene: 120611402
Centisome position: 56.18
GC content: 72.32
Gene sequence:
>1380_bases GTGCCCCGTGCATGCTTCGCTTTCCAGACGATGTCCTCTGTTCCCTCGATCGCCCCGCCTCCGCTGCCCGGCATGCTGTC CCGGCAGATGGGCATCGCCATCCGCGCCTACGGCCGCCGCGCGGGTCTGCTGCGCGGCGGCCATACTGTCCGCGCCCTCA AGGCCGTGGACCAGCGGCTGGACGCCCTGCTTGCGGTCTGCCGCTACTATGGGCCCGCCTGCCTGGAAGCCGCTGCAGAG GCCGCCGCAGCAGCAACGGCAGAAGACCAGGCCGGCGCAGCCTTCGTGCGAACCATGCTGTCCGAACACCACGAGCCGGA CGCTGGCGCGCGCCTCGCACTCATCGAAGCACTGCTGGCCGAGCACCCCGACGCCGTGGGCGATGCCTTGTGGTTCCATG GCAAACCCGACACCTGCGCGCGGCTGCTCGCTGCCGCCAACCCCGTGCTGCGGGACTGCGGCGTGCAACTGGCCGGACGG CTGGCCCTGCCGGTGCAGGCCGATGCCGTCTATGCCGCAGCCCGCAACGGCGCTGACCAGGATGCCTGCCTGCTGGCATG CGCCGGCATGGACGCGCTGCCGCCGCGCGCAGAGGAACGCTGGGCCGACGTGCTGCAGGGCCAGGACCTGGCGCGCCAGA TCACGGCGTTGCGGGCGCTGGCCATCACCGGCGGGCAACGGCTGGCAACGGAGGTACGGAACTACATCACCCGCATCACC GCGCACGACGGCCCGACCGAGCAGTCCCATCCGGTCGGCTGGGCGCTGGCCGCCGATGCGGCCATGGCCCTCTGGGCGGC CCGCGAGCCCGACGCCGCGCTGGACGCGGTGGTGGGCGGGCTGCGTGTGCCCAATGACACCGCACTGCGCGTGGTGGCGC TCACCGGCAAGGCGCGCGGCCTGCTGCCCGTGCTGGATTTCATCGAACGACAGGACCGGCCCGTGAGCCCGGCAGAACGC GATGTGCTGCAACTGGTTTTCGGGCAAGTGCCGCCGGAGCTGGCCAACACGCAGGGGGCCAGCCCGGAGGCCCGGAAGGG CGCGCTGCGCGCACTCGCCTGTGGCGTGTTCGCCGCCAACGGCTGCACCGGCCTCGCGCCCGATGACATCACCTCCTGGG CCGATCCCGCCACGAAGGAGCGGCTCTGGGCGCTGGAGCCGGTACGACTGCGCGGTGCCCGCCCGTGGTCGTCGCGCGCC TGCCTGGAGCAGGCCTTCGATGTGGGCCATACCCTGCGGCGCTGGCTGTACACCGAGCACGCGCGCTACGGCGCCCGGTG CTTTCCCCTGCAGCCGGAAGACCTGGCCACGCGCCAGATGGCCGCCGTCGAGGCCGTGCAGCTGATCGCCTCGCTCGAAG ACGGCAGCGAGAACCCATGA
Upstream 100 bases:
>100_bases GAAACGCGCGCCCACCAGATCACGTCGGCCGCGGTCGAAACGCACCGCATCGAAGGCGGCTCCATCGAGCTCAACTGACC CGGCATGGTCACGGGGCTGC
Downstream 100 bases:
>100_bases GCTGCGAGATCCTCAACCACACGCCGTTCCGGGCCCAGGCGTTCCTGCACCGGGACACGCAAACCGGCCCCGCCCTGGTG GTCGCCGTGAAAGGCAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MPRACFAFQTMSSVPSIAPPPLPGMLSRQMGIAIRAYGRRAGLLRGGHTVRALKAVDQRLDALLAVCRYYGPACLEAAAE AAAAATAEDQAGAAFVRTMLSEHHEPDAGARLALIEALLAEHPDAVGDALWFHGKPDTCARLLAAANPVLRDCGVQLAGR LALPVQADAVYAAARNGADQDACLLACAGMDALPPRAEERWADVLQGQDLARQITALRALAITGGQRLATEVRNYITRIT AHDGPTEQSHPVGWALAADAAMALWAAREPDAALDAVVGGLRVPNDTALRVVALTGKARGLLPVLDFIERQDRPVSPAER DVLQLVFGQVPPELANTQGASPEARKGALRALACGVFAANGCTGLAPDDITSWADPATKERLWALEPVRLRGARPWSSRA CLEQAFDVGHTLRRWLYTEHARYGARCFPLQPEDLATRQMAAVEAVQLIASLEDGSENP
Sequences:
>Translated_459_residues MPRACFAFQTMSSVPSIAPPPLPGMLSRQMGIAIRAYGRRAGLLRGGHTVRALKAVDQRLDALLAVCRYYGPACLEAAAE AAAAATAEDQAGAAFVRTMLSEHHEPDAGARLALIEALLAEHPDAVGDALWFHGKPDTCARLLAAANPVLRDCGVQLAGR LALPVQADAVYAAARNGADQDACLLACAGMDALPPRAEERWADVLQGQDLARQITALRALAITGGQRLATEVRNYITRIT AHDGPTEQSHPVGWALAADAAMALWAAREPDAALDAVVGGLRVPNDTALRVVALTGKARGLLPVLDFIERQDRPVSPAER DVLQLVFGQVPPELANTQGASPEARKGALRALACGVFAANGCTGLAPDDITSWADPATKERLWALEPVRLRGARPWSSRA CLEQAFDVGHTLRRWLYTEHARYGARCFPLQPEDLATRQMAAVEAVQLIASLEDGSENP >Mature_458_residues PRACFAFQTMSSVPSIAPPPLPGMLSRQMGIAIRAYGRRAGLLRGGHTVRALKAVDQRLDALLAVCRYYGPACLEAAAEA AAAATAEDQAGAAFVRTMLSEHHEPDAGARLALIEALLAEHPDAVGDALWFHGKPDTCARLLAAANPVLRDCGVQLAGRL ALPVQADAVYAAARNGADQDACLLACAGMDALPPRAEERWADVLQGQDLARQITALRALAITGGQRLATEVRNYITRITA HDGPTEQSHPVGWALAADAAMALWAAREPDAALDAVVGGLRVPNDTALRVVALTGKARGLLPVLDFIERQDRPVSPAERD VLQLVFGQVPPELANTQGASPEARKGALRALACGVFAANGCTGLAPDDITSWADPATKERLWALEPVRLRGARPWSSRAC LEQAFDVGHTLRRWLYTEHARYGARCFPLQPEDLATRQMAAVEAVQLIASLEDGSENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48824; Mature: 48693
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRACFAFQTMSSVPSIAPPPLPGMLSRQMGIAIRAYGRRAGLLRGGHTVRALKAVDQRL CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH DALLAVCRYYGPACLEAAAEAAAAATAEDQAGAAFVRTMLSEHHEPDAGARLALIEALLA HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EHPDAVGDALWFHGKPDTCARLLAAANPVLRDCGVQLAGRLALPVQADAVYAAARNGADQ HCCCHHHCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCEECCCCHHHHHHHHCCCCCC DACLLACAGMDALPPRAEERWADVLQGQDLARQITALRALAITGGQRLATEVRNYITRIT HHHHHEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AHDGPTEQSHPVGWALAADAAMALWAAREPDAALDAVVGGLRVPNDTALRVVALTGKARG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCC LLPVLDFIERQDRPVSPAERDVLQLVFGQVPPELANTQGASPEARKGALRALACGVFAAN HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC GCTGLAPDDITSWADPATKERLWALEPVRLRGARPWSSRACLEQAFDVGHTLRRWLYTEH CCCCCCCHHHHHCCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARYGARCFPLQPEDLATRQMAAVEAVQLIASLEDGSENP HHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PRACFAFQTMSSVPSIAPPPLPGMLSRQMGIAIRAYGRRAGLLRGGHTVRALKAVDQRL CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH DALLAVCRYYGPACLEAAAEAAAAATAEDQAGAAFVRTMLSEHHEPDAGARLALIEALLA HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EHPDAVGDALWFHGKPDTCARLLAAANPVLRDCGVQLAGRLALPVQADAVYAAARNGADQ HCCCHHHCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCEECCCCHHHHHHHHCCCCCC DACLLACAGMDALPPRAEERWADVLQGQDLARQITALRALAITGGQRLATEVRNYITRIT HHHHHEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AHDGPTEQSHPVGWALAADAAMALWAAREPDAALDAVVGGLRVPNDTALRVVALTGKARG CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCC LLPVLDFIERQDRPVSPAERDVLQLVFGQVPPELANTQGASPEARKGALRALACGVFAAN HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCC GCTGLAPDDITSWADPATKERLWALEPVRLRGARPWSSRACLEQAFDVGHTLRRWLYTEH CCCCCCCHHHHHCCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARYGARCFPLQPEDLATRQMAAVEAVQLIASLEDGSENP HHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA