| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611402
Identifier: 120611402
GI number: 120611402
Start: 3008449
End: 3009600
Strand: Direct
Name: 120611402
Synonym: Aave_2738
Alternate gene names: NA
Gene position: 3008449-3009600 (Clockwise)
Preceding gene: 120611401
Following gene: 120611403
Centisome position: 56.2
GC content: 73.0
Gene sequence:
>1152_bases ATGAGCTGCGAGATCCTCAACCACACGCCGTTCCGGGCCCAGGCGTTCCTGCACCGGGACACGCAAACCGGCCCCGCCCT GGTGGTCGCCGTGAAAGGCAGCTGGCTGCTGTCCCACACAGAAGGCGCACCTGCGCGCCTCGCCCCTGCGGAACGGCAGG CCCCCATCTTCCGCAGCGGCCTGCAGCAAACGCTGGGCAGCCTGCCGCTCGAAGACGCACAGGCCGCCGCCATCCAGGAC CGAGCGAATGAATGCTGGAGCCGCATCGAATCCGAGCACGTGCCCCCGAAGCCCTGCTTCGACCTGCTGCTCCATGCCTG GGCCGTGGCGCCCGGGGGCCAGCCCGTGCGCGCCATGGAGGCCGCCGTCGATGTCCTGGCCGGCCCCGCGGCACGCCGCC TGCTGGCCCTGCGCGCCTTCGCGCCCCGGACATGGACGGCCGACTTCGGTGGCCTGGGCCGGTTGCGCCCGGACTGCGCG CACACGGCATCGCGCATCCCGCTGCTGCGCCCCTTCGCCTTCGGCGGCCAGTGCACCGACCCCGCCACGGGCCAGCACCA TGCCATCGAAGCCAACCCGGAAGGCATGGGCTACTACCGCTCGGCCGCCGATGCCCGGGGCCGGCCCCTGCCCTGGGTGG AGCCGGCCGACCGGCCGCTGCGCGATTGGGACGACCGGCCCGCTCCAGCGGCGCTGGGTCCCGTCCCGCCCCACCACGTG CCGCGCCGCGACCTGCAGGGCACCTTTGGCGACCACTGGCGCGCCACACGCGCACCGGAATTGCCGGAGGATTTCAATCC TCGGCACTACAACGCCGCGCCCGAGGCGCTGCAACTGCGCGAGTTTCCCCGCCCCGGCCATCGCCTGGCGCTGCACGGCA TGGACACAGCAGGTCCGCTGTTTTTCACCTGGCCGGAGATCGCGCTGACCGCCCAGGCGGAAACCACCGGGGGCACGCTG CTGCCTCCGCAGGAGATGCGCTGGGACACGCTGATGGCGGACACCGGCGAGCGGCTCGCCAGCCTGCTCTGGCGCACGGC CATCGCATTGCCGGCCCGGGAAGACATCGGCCTCGTGCACATCGCCGCCCACGCCCGTTCGCCTTCGGCCGTGCCATTCC ACGCCGCCCGACCTTCCGCGCAGCCCGCCTGA
Upstream 100 bases:
>100_bases GGTGCTTTCCCCTGCAGCCGGAAGACCTGGCCACGCGCCAGATGGCCGCCGTCGAGGCCGTGCAGCTGATCGCCTCGCTC GAAGACGGCAGCGAGAACCC
Downstream 100 bases:
>100_bases CGCACGCAGTTCCCATGGCCTCACCTTCCCCCGCTTCGCCCCACCGCCTCTGGCGCATCGAACACTGCGGCGCCGTCACT TCGGCCGGCACGCGCGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSCEILNHTPFRAQAFLHRDTQTGPALVVAVKGSWLLSHTEGAPARLAPAERQAPIFRSGLQQTLGSLPLEDAQAAAIQD RANECWSRIESEHVPPKPCFDLLLHAWAVAPGGQPVRAMEAAVDVLAGPAARRLLALRAFAPRTWTADFGGLGRLRPDCA HTASRIPLLRPFAFGGQCTDPATGQHHAIEANPEGMGYYRSAADARGRPLPWVEPADRPLRDWDDRPAPAALGPVPPHHV PRRDLQGTFGDHWRATRAPELPEDFNPRHYNAAPEALQLREFPRPGHRLALHGMDTAGPLFFTWPEIALTAQAETTGGTL LPPQEMRWDTLMADTGERLASLLWRTAIALPAREDIGLVHIAAHARSPSAVPFHAARPSAQPA
Sequences:
>Translated_383_residues MSCEILNHTPFRAQAFLHRDTQTGPALVVAVKGSWLLSHTEGAPARLAPAERQAPIFRSGLQQTLGSLPLEDAQAAAIQD RANECWSRIESEHVPPKPCFDLLLHAWAVAPGGQPVRAMEAAVDVLAGPAARRLLALRAFAPRTWTADFGGLGRLRPDCA HTASRIPLLRPFAFGGQCTDPATGQHHAIEANPEGMGYYRSAADARGRPLPWVEPADRPLRDWDDRPAPAALGPVPPHHV PRRDLQGTFGDHWRATRAPELPEDFNPRHYNAAPEALQLREFPRPGHRLALHGMDTAGPLFFTWPEIALTAQAETTGGTL LPPQEMRWDTLMADTGERLASLLWRTAIALPAREDIGLVHIAAHARSPSAVPFHAARPSAQPA >Mature_382_residues SCEILNHTPFRAQAFLHRDTQTGPALVVAVKGSWLLSHTEGAPARLAPAERQAPIFRSGLQQTLGSLPLEDAQAAAIQDR ANECWSRIESEHVPPKPCFDLLLHAWAVAPGGQPVRAMEAAVDVLAGPAARRLLALRAFAPRTWTADFGGLGRLRPDCAH TASRIPLLRPFAFGGQCTDPATGQHHAIEANPEGMGYYRSAADARGRPLPWVEPADRPLRDWDDRPAPAALGPVPPHHVP RRDLQGTFGDHWRATRAPELPEDFNPRHYNAAPEALQLREFPRPGHRLALHGMDTAGPLFFTWPEIALTAQAETTGGTLL PPQEMRWDTLMADTGERLASLLWRTAIALPAREDIGLVHIAAHARSPSAVPFHAARPSAQPA
Specific function: Unknown
COG id: COG5351
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41717; Mature: 41585
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCEILNHTPFRAQAFLHRDTQTGPALVVAVKGSWLLSHTEGAPARLAPAERQAPIFRSG CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHCCHHHHHH LQQTLGSLPLEDAQAAAIQDRANECWSRIESEHVPPKPCFDLLLHAWAVAPGGQPVRAME HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHH AAVDVLAGPAARRLLALRAFAPRTWTADFGGLGRLRPDCAHTASRIPLLRPFAFGGQCTD HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC PATGQHHAIEANPEGMGYYRSAADARGRPLPWVEPADRPLRDWDDRPAPAALGPVPPHHV CCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRRDLQGTFGDHWRATRAPELPEDFNPRHYNAAPEALQLREFPRPGHRLALHGMDTAGPL CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCE FFTWPEIALTAQAETTGGTLLPPQEMRWDTLMADTGERLASLLWRTAIALPAREDIGLVH EEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IAAHARSPSAVPFHAARPSAQPA EEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SCEILNHTPFRAQAFLHRDTQTGPALVVAVKGSWLLSHTEGAPARLAPAERQAPIFRSG CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCHHCCHHHHHH LQQTLGSLPLEDAQAAAIQDRANECWSRIESEHVPPKPCFDLLLHAWAVAPGGQPVRAME HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHH AAVDVLAGPAARRLLALRAFAPRTWTADFGGLGRLRPDCAHTASRIPLLRPFAFGGQCTD HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC PATGQHHAIEANPEGMGYYRSAADARGRPLPWVEPADRPLRDWDDRPAPAALGPVPPHHV CCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRRDLQGTFGDHWRATRAPELPEDFNPRHYNAAPEALQLREFPRPGHRLALHGMDTAGPL CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCE FFTWPEIALTAQAETTGGTLLPPQEMRWDTLMADTGERLASLLWRTAIALPAREDIGLVH EEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE IAAHARSPSAVPFHAARPSAQPA EEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA