| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611377
Identifier: 120611377
GI number: 120611377
Start: 2980035
End: 2980994
Strand: Direct
Name: 120611377
Synonym: Aave_2713
Alternate gene names: NA
Gene position: 2980035-2980994 (Clockwise)
Preceding gene: 120611376
Following gene: 120611378
Centisome position: 55.67
GC content: 65.62
Gene sequence:
>960_bases GTGTATTGTTTTGTAATACAATACATACAACAAACAGGGTTAGTCCGAGAGATTTATATGTCCAGCGAAGCAACTATCAC CGAGAAACTCATCATCCAAGCGTGTGAAGCTCTGGCTGCTGAGGGGACTCGGCCCACGAATGAGTCTGTGAGAAACCGTC TCGCACTGATGACCGGAACCAAGGGTGGCTCTTACGCGACGATCGGCCCGGTCGTGAGGGCGTGGAACGAGGCCCGCAAA GCAGCTGCGGCGGCGGGCAGCGCACGCGAGCCGGCTCCACAAATCGTGATGGACAAGCTCCAGGCGTGGTCGGCGGACCT ATGGGCGGCAGCGCTCAAGCTTGCAGACGATCGGCTCGCTGCCGAGCGCGAGGGACTGGAACGCGCCCGGGCCGAGCTCG AGAGCGAAGCGGCCGAAGCCCTGGACTTGGCAGAGCGGCGAGAAGCTGAGCGCGATGAGGCTCGCCGGGCTGCTGCCACC GAATCGGAGCAACTGCGCGGCGTCCTGGCGGCGGCGCAAGCAGAGGCGGGCGCTCAGGCCGCGCGCGCAGCCGCCGCCGA GGCGAGGGCAACGGAGATCGCAGTCCGGGTCGAAGATCTGCAGGCGCGCCTGCAAAATGAGGAGGCGCGCCACAAGTCGG CGAGCGAGGACCTGACGAGCATGCGCGCCGTGGTTGCCCGCCTGGAGCAGCAGACCACCGATCAATCGCGGCAGCTGGCC GCCGCGCTCGAAGAGATCAAACAGGCCCGCCACGCGTTGGAGGCCGAGCGAGATCGAGCCCGAGCAGAGCTTGCGGAGGA GCGGCGCCGACTCGAGGGAAGCGTGGACGAAGTGAAGCGCGAACTGGCGTCGGCACGAAAGGAAGCCCTGGACGCGACCA CCCAGCTGGCTCGTGCCGGAGGCCGCGTCGAGGCCCTTGAAGAGCAGTTGGCCAAGGTGCAGCCGGCGAAGCAGAAATAG
Upstream 100 bases:
>100_bases ATTCGTCGAGGTCGCATGACCTTTGCCCAGGGCGCCGCGAGGCGACCCTGGGCTTTTTTTATCAGACTGCCAGGCCCACC CCTAATAGGACGCTTGTGTT
Downstream 100 bases:
>100_bases TGGGGGCAGGTGGCATCTGCCAACTTTGAAATCCAGCGCATCAACCCCGGAGGGAATATGAATCAAACACGCTCCACGCG GATGACGTCCGCAGAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MYCFVIQYIQQTGLVREIYMSSEATITEKLIIQACEALAAEGTRPTNESVRNRLALMTGTKGGSYATIGPVVRAWNEARK AAAAAGSAREPAPQIVMDKLQAWSADLWAAALKLADDRLAAEREGLERARAELESEAAEALDLAERREAERDEARRAAAT ESEQLRGVLAAAQAEAGAQAARAAAAEARATEIAVRVEDLQARLQNEEARHKSASEDLTSMRAVVARLEQQTTDQSRQLA AALEEIKQARHALEAERDRARAELAEERRRLEGSVDEVKRELASARKEALDATTQLARAGGRVEALEEQLAKVQPAKQK
Sequences:
>Translated_319_residues MYCFVIQYIQQTGLVREIYMSSEATITEKLIIQACEALAAEGTRPTNESVRNRLALMTGTKGGSYATIGPVVRAWNEARK AAAAAGSAREPAPQIVMDKLQAWSADLWAAALKLADDRLAAEREGLERARAELESEAAEALDLAERREAERDEARRAAAT ESEQLRGVLAAAQAEAGAQAARAAAAEARATEIAVRVEDLQARLQNEEARHKSASEDLTSMRAVVARLEQQTTDQSRQLA AALEEIKQARHALEAERDRARAELAEERRRLEGSVDEVKRELASARKEALDATTQLARAGGRVEALEEQLAKVQPAKQK >Mature_319_residues MYCFVIQYIQQTGLVREIYMSSEATITEKLIIQACEALAAEGTRPTNESVRNRLALMTGTKGGSYATIGPVVRAWNEARK AAAAAGSAREPAPQIVMDKLQAWSADLWAAALKLADDRLAAEREGLERARAELESEAAEALDLAERREAERDEARRAAAT ESEQLRGVLAAAQAEAGAQAARAAAAEARATEIAVRVEDLQARLQNEEARHKSASEDLTSMRAVVARLEQQTTDQSRQLA AALEEIKQARHALEAERDRARAELAEERRRLEGSVDEVKRELASARKEALDATTQLARAGGRVEALEEQLAKVQPAKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34791; Mature: 34791
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCFVIQYIQQTGLVREIYMSSEATITEKLIIQACEALAAEGTRPTNESVRNRLALMTGT CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC KGGSYATIGPVVRAWNEARKAAAAAGSAREPAPQIVMDKLQAWSADLWAAALKLADDRLA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEREGLERARAELESEAAEALDLAERREAERDEARRAAATESEQLRGVLAAAQAEAGAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ARAAAAEARATEIAVRVEDLQARLQNEEARHKSASEDLTSMRAVVARLEQQTTDQSRQLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALEEIKQARHALEAERDRARAELAEERRRLEGSVDEVKRELASARKEALDATTQLARAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GRVEALEEQLAKVQPAKQK CHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYCFVIQYIQQTGLVREIYMSSEATITEKLIIQACEALAAEGTRPTNESVRNRLALMTGT CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC KGGSYATIGPVVRAWNEARKAAAAAGSAREPAPQIVMDKLQAWSADLWAAALKLADDRLA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEREGLERARAELESEAAEALDLAERREAERDEARRAAATESEQLRGVLAAAQAEAGAQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH ARAAAAEARATEIAVRVEDLQARLQNEEARHKSASEDLTSMRAVVARLEQQTTDQSRQLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALEEIKQARHALEAERDRARAELAEERRRLEGSVDEVKRELASARKEALDATTQLARAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC GRVEALEEQLAKVQPAKQK CHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA