| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611376
Identifier: 120611376
GI number: 120611376
Start: 2979495
End: 2979953
Strand: Direct
Name: 120611376
Synonym: Aave_2712
Alternate gene names: NA
Gene position: 2979495-2979953 (Clockwise)
Preceding gene: 120611374
Following gene: 120611377
Centisome position: 55.66
GC content: 63.18
Gene sequence:
>459_bases ATGATGAAAGAAGTTGACGCAACCGAGGCCAGGTACGGTTATCTGGTGCAACTGAACGCTGCGAGAGGCTCAGGAGACGT TGCCGCGGCTCGGCTCGCAGAGCTTGCGCTGCAGGCGCTTTGTCCGGAGCTTGTTGGGCTGGACCTCTGCAGCTGCTCGG GGTGGACCGAAGGCGCGAAGGCGTTGCTGAGCCAATCTCCGCCAGGCACCGCACTGGTGGACGAGGCTTGCGACGGGCTC GTCGTTCTCGTTCAGGGACAGGTCGTCGGTTTGCCGCGGCTTACTCGTGCGGGTGAGTGCTATCTCACCGAGGGAGGGCT CCCAGTCTTGGGCCGCGAGGCCAGCCCGGAGCACTGGGACTATGAAAGAAGGTGCTGGGAAGCTCATGAGCCCATGCACG CGAGAGACGTTCTTCTGTTCCCGCACCGGACCACGGTGCGATTCGTCGAGGTCGCATGA
Upstream 100 bases:
>100_bases TCCGCCGGCGGTTTCCTGCGCCTCCCCCCCTGTTCTCGCCATTCATTCGGCTTCGGCCGAGGGGGAGGGGCGCGCTTTAT TCACCTGTAAGTGGAGGACC
Downstream 100 bases:
>100_bases CCTTTGCCCAGGGCGCCGCGAGGCGACCCTGGGCTTTTTTTATCAGACTGCCAGGCCCACCCCTAATAGGACGCTTGTGT TGTGTATTGTTTTGTAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MMKEVDATEARYGYLVQLNAARGSGDVAAARLAELALQALCPELVGLDLCSCSGWTEGAKALLSQSPPGTALVDEACDGL VVLVQGQVVGLPRLTRAGECYLTEGGLPVLGREASPEHWDYERRCWEAHEPMHARDVLLFPHRTTVRFVEVA
Sequences:
>Translated_152_residues MMKEVDATEARYGYLVQLNAARGSGDVAAARLAELALQALCPELVGLDLCSCSGWTEGAKALLSQSPPGTALVDEACDGL VVLVQGQVVGLPRLTRAGECYLTEGGLPVLGREASPEHWDYERRCWEAHEPMHARDVLLFPHRTTVRFVEVA >Mature_152_residues MMKEVDATEARYGYLVQLNAARGSGDVAAARLAELALQALCPELVGLDLCSCSGWTEGAKALLSQSPPGTALVDEACDGL VVLVQGQVVGLPRLTRAGECYLTEGGLPVLGREASPEHWDYERRCWEAHEPMHARDVLLFPHRTTVRFVEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16447; Mature: 16447
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKEVDATEARYGYLVQLNAARGSGDVAAARLAELALQALCPELVGLDLCSCSGWTEGAK CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHH ALLSQSPPGTALVDEACDGLVVLVQGQVVGLPRLTRAGECYLTEGGLPVLGREASPEHWD HHHCCCCCCCCHHHHCCCCEEEEEECCEECCCCCCCCCEEEEECCCCEEECCCCCCCCCC YERRCWEAHEPMHARDVLLFPHRTTVRFVEVA HHHHHHHHCCCCCCCEEEEECCCCEEEEEEEC >Mature Secondary Structure MMKEVDATEARYGYLVQLNAARGSGDVAAARLAELALQALCPELVGLDLCSCSGWTEGAK CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHH ALLSQSPPGTALVDEACDGLVVLVQGQVVGLPRLTRAGECYLTEGGLPVLGREASPEHWD HHHCCCCCCCCHHHHCCCCEEEEEECCEECCCCCCCCCEEEEECCCCEEECCCCCCCCCC YERRCWEAHEPMHARDVLLFPHRTTVRFVEVA HHHHHHHHCCCCCCCEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA