| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610857
Identifier: 120610857
GI number: 120610857
Start: 2400601
End: 2401359
Strand: Reverse
Name: 120610857
Synonym: Aave_2183
Alternate gene names: NA
Gene position: 2401359-2400601 (Counterclockwise)
Preceding gene: 120610858
Following gene: 120610856
Centisome position: 44.86
GC content: 68.12
Gene sequence:
>759_bases ATGTCGATCCCGCAACACGCCGCGCCCATCGCGGCCCGCACGCCCACTTTCATCGATCTTCGCGAGTTCTCGCAGGACAC GAGCCAAGGCATCGTCCCGGCAGCCGGCGCAGGAGACGATCCGTTCCTGTCCCGCCGGCGCATCCTGGACTGGGCGCCAG GCCCGGTCACGGCCGGCGTCATTGCGCTGGATGCCGGCAGCGGCTCGGTGGCGAGCCTGCCGGGCGATGAGTGCATCCTC GTCACGGAAGGGCAACTGACCCTGCGGCAGCCGCAGCAGGACGCTCCCCTGGTGCTGGGCCCCGGACAAAGCGCCGTGAT TCCGCACGGCGCGGCCTTTTCCTGGTCGGCGCAAGGACCGGTATCGCTGGTCTTCACACGCTACAACCGCAGCCAGCCGG GCGACGGCGCCATCGTGCCGGTCCGGCAGGCGCCGGAACTCAAGCCGTCCGGCTCGCCGCCGCCCGACCTGCTCACCACG CCTGCGCCCTCGTGCCGCAACTTCACCGACTACACCAGTGCCGATGGCGAATTCATGTGCGGCACCTGGGATTCCACGCC CTATGCGCGCCGCCCGCTCTTCTACCGCCACTACGAACTGATGTACCTGCTCGAAGGCAGCGTGACATTCGTGGATGGGC AGGGGCGCACCCGCACGTTCTCGAAGGGCGACATCTTCCTGGTCGAACAGGGCGCCAGCTGCAGCTGGGACAGCCGCGAC CACGTGGCCAAGCTCTACGTGATCTATCGACCCAAGTGA
Upstream 100 bases:
>100_bases TCTTCGCCCTCGTCTCCCAGGCCCTCTGCTGACAGGCCACCGGGCTTGCCGCCGCATTGCAGCACCCCCTTCCGTTCCAC CAACGCATCGAGCAACCAGC
Downstream 100 bases:
>100_bases CACGCGCCACCCAGCGCCCAAGCCGCGAGTCACCATGAGCTTTCTCTACAAGTCCGACCCCGTGCGCGGCGCGGTGTGGG CGGAGCGCTTCGCGCTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSIPQHAAPIAARTPTFIDLREFSQDTSQGIVPAAGAGDDPFLSRRRILDWAPGPVTAGVIALDAGSGSVASLPGDECIL VTEGQLTLRQPQQDAPLVLGPGQSAVIPHGAAFSWSAQGPVSLVFTRYNRSQPGDGAIVPVRQAPELKPSGSPPPDLLTT PAPSCRNFTDYTSADGEFMCGTWDSTPYARRPLFYRHYELMYLLEGSVTFVDGQGRTRTFSKGDIFLVEQGASCSWDSRD HVAKLYVIYRPK
Sequences:
>Translated_252_residues MSIPQHAAPIAARTPTFIDLREFSQDTSQGIVPAAGAGDDPFLSRRRILDWAPGPVTAGVIALDAGSGSVASLPGDECIL VTEGQLTLRQPQQDAPLVLGPGQSAVIPHGAAFSWSAQGPVSLVFTRYNRSQPGDGAIVPVRQAPELKPSGSPPPDLLTT PAPSCRNFTDYTSADGEFMCGTWDSTPYARRPLFYRHYELMYLLEGSVTFVDGQGRTRTFSKGDIFLVEQGASCSWDSRD HVAKLYVIYRPK >Mature_251_residues SIPQHAAPIAARTPTFIDLREFSQDTSQGIVPAAGAGDDPFLSRRRILDWAPGPVTAGVIALDAGSGSVASLPGDECILV TEGQLTLRQPQQDAPLVLGPGQSAVIPHGAAFSWSAQGPVSLVFTRYNRSQPGDGAIVPVRQAPELKPSGSPPPDLLTTP APSCRNFTDYTSADGEFMCGTWDSTPYARRPLFYRHYELMYLLEGSVTFVDGQGRTRTFSKGDIFLVEQGASCSWDSRDH VAKLYVIYRPK
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27167; Mature: 27036
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPQHAAPIAARTPTFIDLREFSQDTSQGIVPAAGAGDDPFLSRRRILDWAPGPVTAGV CCCCCCCCCCCCCCCCEEEHHHHCCHHHCCCEECCCCCCCCHHHHHHEEECCCCCCCEEE IALDAGSGSVASLPGDECILVTEGQLTLRQPQQDAPLVLGPGQSAVIPHGAAFSWSAQGP EEEECCCCCEEECCCCCEEEEECCCEEEECCCCCCCEEECCCCCEEECCCCEEEECCCCC VSLVFTRYNRSQPGDGAIVPVRQAPELKPSGSPPPDLLTTPAPSCRNFTDYTSADGEFMC EEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GTWDSTPYARRPLFYRHYELMYLLEGSVTFVDGQGRTRTFSKGDIFLVEQGASCSWDSRD ECCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCC HVAKLYVIYRPK CEEEEEEEEECC >Mature Secondary Structure SIPQHAAPIAARTPTFIDLREFSQDTSQGIVPAAGAGDDPFLSRRRILDWAPGPVTAGV CCCCCCCCCCCCCCCEEEHHHHCCHHHCCCEECCCCCCCCHHHHHHEEECCCCCCCEEE IALDAGSGSVASLPGDECILVTEGQLTLRQPQQDAPLVLGPGQSAVIPHGAAFSWSAQGP EEEECCCCCEEECCCCCEEEEECCCEEEECCCCCCCEEECCCCCEEECCCCEEEECCCCC VSLVFTRYNRSQPGDGAIVPVRQAPELKPSGSPPPDLLTTPAPSCRNFTDYTSADGEFMC EEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE GTWDSTPYARRPLFYRHYELMYLLEGSVTFVDGQGRTRTFSKGDIFLVEQGASCSWDSRD ECCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCC HVAKLYVIYRPK CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA