| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610833
Identifier: 120610833
GI number: 120610833
Start: 2371434
End: 2372630
Strand: Reverse
Name: 120610833
Synonym: Aave_2159
Alternate gene names: NA
Gene position: 2372630-2371434 (Counterclockwise)
Preceding gene: 120610834
Following gene: 120610831
Centisome position: 44.33
GC content: 75.86
Gene sequence:
>1197_bases ATGGCCACGCTGCTCACCATCGAAGACCCCCCGCGCACGCCCCACCGCGGCCCCTCGCTGTCCGCGCTGTTCGCGCTCGG CTTCCGCCCCTTCTACCTGCTGGCGACGGCCTTCGCGGCCATCTCCGTGCCGCTGTGGGCGCTGCAGTTCTCCGGCTGGC TGGGCCACCCCTACCTCGCGGGGCCGCTCTGGCATGCGCACGAAATGCTGTTCGGCTTCGCGCTCGCGGTGATCGTGGGC TTCCTGTTCACCGCAGGCCGCAACTGGACGGGCCAGCCCACGCCCGCCGGCGCGGGCCTGGCGGCGCTGGTGGCGCTCTG GCTGGCGGCGCGCGTGCTGGTGCTCACGCCTTTCGCGGCGGCCGCGGCCTGGGCGAACGTCGCTTTCCCCCTGGCGGCGG CCGTCGCGCTGGCCGTGCCGCTCGCACGTGCGCGCAACCGTCGCAACTACTTCTTCGCGGGCCTGCTGGCGATGATGGCC GCGGCGGCGGCGTGCATCCACTTCGCGCCGGCCGGCACGGGCACTTTGCCCTGGCGCGGCGTGCAGCTGGCGCTGGACGC GGTGCTGTTCATCCTCTGCGTCATGGGAGGGCGGGTGATACCGATGTTCACGCAGAACGGCGTGCCCGGCACCCTGCCGC GCCGCCATGCGCGGCTGGAGCAGGCCGCGCTGGGCGCCGTGCTCGCGCTCATGGCGGCCGATGCCGCGGGCGTGGCGGGC CTGCCGCTCGCGGCGCTGGCGGCCGTCGCCGCCGTCCTGCACGCCTGGCGCTGGTGGCTCTGGCAGCCATGGAGCACGCG CCGCGCACCCCTGGTCTGGATACTCCAGGCGGGCTATGCCTGGGTGCCCGTGCACCTGCTGCTGCGCGCCCTGGCCGCCG CCGGTGCGGTGGCGCCCACGCTGGCCACCCACGCGCTCACCGTCGGCGCCGTGGGCGGCCTCGTCGTCGGCATGGTCACG CGCACGGCGCGCGGCCACACGGGCCGGCCGCTGCGCGCAGACCGGTGGGAGACGGTCTGCTACGCGCTGGTGCTGATCGC AGCGCTCGTGCGCGTCGCCTGGCCACTGGCCGCGCCGGCCCACCTGCTGCACGCGGTGCTGGCCTCGGCCGTGCCGTGGT CGGCCGGGTTCGGGCTGTATGCGGTGCGCTACTGGCCCGCCCTCTCCCGCCCGCGCCTGGACGGCCGGCCGGGTTGA
Upstream 100 bases:
>100_bases GCGCCGGACGCGTTGGCCGTGTCCGCCACTTCGGCTCCCTGCTCCCACGGGGCGGCCCCGCTGCACGGCATTTCTTTCGC ATCCAGAAGGACTGCCTGCC
Downstream 100 bases:
>100_bases GCGCGGGAGCGCCGCGCCCACCCTTTCCGCAGCGGCCACGTGCTCCGACGGGTGCGGCGCCTCAGTGCCCGCCCGCCGCA GCTCCCGGCCCGCCACGGTA
Product: NnrS family protein
Products: NA
Alternate protein names: Heme/Copper Membrane Protein; Protein Involved In Response NO; Transmembrane Protein; Heme-Cu-Containing Membrane Protein; Nnrs Family Protein; Heme-Cu Protein NnrS; NnrS Protein
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MATLLTIEDPPRTPHRGPSLSALFALGFRPFYLLATAFAAISVPLWALQFSGWLGHPYLAGPLWHAHEMLFGFALAVIVG FLFTAGRNWTGQPTPAGAGLAALVALWLAARVLVLTPFAAAAAWANVAFPLAAAVALAVPLARARNRRNYFFAGLLAMMA AAAACIHFAPAGTGTLPWRGVQLALDAVLFILCVMGGRVIPMFTQNGVPGTLPRRHARLEQAALGAVLALMAADAAGVAG LPLAALAAVAAVLHAWRWWLWQPWSTRRAPLVWILQAGYAWVPVHLLLRALAAAGAVAPTLATHALTVGAVGGLVVGMVT RTARGHTGRPLRADRWETVCYALVLIAALVRVAWPLAAPAHLLHAVLASAVPWSAGFGLYAVRYWPALSRPRLDGRPG
Sequences:
>Translated_398_residues MATLLTIEDPPRTPHRGPSLSALFALGFRPFYLLATAFAAISVPLWALQFSGWLGHPYLAGPLWHAHEMLFGFALAVIVG FLFTAGRNWTGQPTPAGAGLAALVALWLAARVLVLTPFAAAAAWANVAFPLAAAVALAVPLARARNRRNYFFAGLLAMMA AAAACIHFAPAGTGTLPWRGVQLALDAVLFILCVMGGRVIPMFTQNGVPGTLPRRHARLEQAALGAVLALMAADAAGVAG LPLAALAAVAAVLHAWRWWLWQPWSTRRAPLVWILQAGYAWVPVHLLLRALAAAGAVAPTLATHALTVGAVGGLVVGMVT RTARGHTGRPLRADRWETVCYALVLIAALVRVAWPLAAPAHLLHAVLASAVPWSAGFGLYAVRYWPALSRPRLDGRPG >Mature_397_residues ATLLTIEDPPRTPHRGPSLSALFALGFRPFYLLATAFAAISVPLWALQFSGWLGHPYLAGPLWHAHEMLFGFALAVIVGF LFTAGRNWTGQPTPAGAGLAALVALWLAARVLVLTPFAAAAAWANVAFPLAAAVALAVPLARARNRRNYFFAGLLAMMAA AAACIHFAPAGTGTLPWRGVQLALDAVLFILCVMGGRVIPMFTQNGVPGTLPRRHARLEQAALGAVLALMAADAAGVAGL PLAALAAVAAVLHAWRWWLWQPWSTRRAPLVWILQAGYAWVPVHLLLRALAAAGAVAPTLATHALTVGAVGGLVVGMVTR TARGHTGRPLRADRWETVCYALVLIAALVRVAWPLAAPAHLLHAVLASAVPWSAGFGLYAVRYWPALSRPRLDGRPG
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42028; Mature: 41897
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLLTIEDPPRTPHRGPSLSALFALGFRPFYLLATAFAAISVPLWALQFSGWLGHPYLA CCEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GPLWHAHEMLFGFALAVIVGFLFTAGRNWTGQPTPAGAGLAALVALWLAARVLVLTPFAA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAAWANVAFPLAAAVALAVPLARARNRRNYFFAGLLAMMAAAAACIHFAPAGTGTLPWRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH VQLALDAVLFILCVMGGRVIPMFTQNGVPGTLPRRHARLEQAALGAVLALMAADAAGVAG HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LPLAALAAVAAVLHAWRWWLWQPWSTRRAPLVWILQAGYAWVPVHLLLRALAAAGAVAPT CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHH LATHALTVGAVGGLVVGMVTRTARGHTGRPLRADRWETVCYALVLIAALVRVAWPLAAPA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH HLLHAVLASAVPWSAGFGLYAVRYWPALSRPRLDGRPG HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ATLLTIEDPPRTPHRGPSLSALFALGFRPFYLLATAFAAISVPLWALQFSGWLGHPYLA CEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GPLWHAHEMLFGFALAVIVGFLFTAGRNWTGQPTPAGAGLAALVALWLAARVLVLTPFAA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAAWANVAFPLAAAVALAVPLARARNRRNYFFAGLLAMMAAAAACIHFAPAGTGTLPWRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH VQLALDAVLFILCVMGGRVIPMFTQNGVPGTLPRRHARLEQAALGAVLALMAADAAGVAG HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LPLAALAAVAAVLHAWRWWLWQPWSTRRAPLVWILQAGYAWVPVHLLLRALAAAGAVAPT CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHHH LATHALTVGAVGGLVVGMVTRTARGHTGRPLRADRWETVCYALVLIAALVRVAWPLAAPA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH HLLHAVLASAVPWSAGFGLYAVRYWPALSRPRLDGRPG HHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA