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The map label for this gene is 120610699

Identifier: 120610699

GI number: 120610699

Start: 2196550

End: 2197089

Strand: Reverse

Name: 120610699

Synonym: Aave_2019

Alternate gene names: NA

Gene position: 2197089-2196550 (Counterclockwise)

Preceding gene: 120610701

Following gene: 120610698

Centisome position: 41.05

GC content: 65.74

Gene sequence:

>540_bases
GTGACAGGACTCCTCCAACTGGCCAGGGGCATGGACTGGGTTTCCACCAGGCTCAGCAAGATCGCGGGCTGGGCCGTGCT
CGCCGCCGCCCTGATTTCCGCGGGCAACGCCCTGGTGCGCTACGGGCTGGATCTCAGCTCCAACGCGTGGCTCGAGATCC
AGTGGTACCTCTTCGGCACCACCGTGATGCTCGGCGCGCCGGTGGTGCTCAAGCTCAACGAACACGTGCGCGTGGACATC
ATCTACGGCAAGCTGCGCGGCCGCGGGCCGGTCCTCGTCGATCTGTTCGGCCTCATCTTCTTCCTGCTGCCCGTGATGGG
CCTGCTCACCTGGCTCACGTGGCCGTTCTTCTGGAACATGTATGTCACCAAGGAGATGTCGGGCAACATCGGCGGCCTGA
TCCGCTGGCCCGCGGCGCTGCTGCTGCCCGTGGGCTTCGGCGCGGTCTTCCTGCAGGGCCTGGCCGAGATCGTCAAGCGC
GTGGCCTACCTGACGGGGCACCTGCAGATCAGCACCCATTACGAGAAGCCGGTGCAGTAA

Upstream 100 bases:

>100_bases
CTGCGCGGCGGTGAGTCAACCCGTTCAGTGGCCAAGGCCGGCCGGCCTGCCTTGACGACTGAAGTTTGAACCAACTGAGA
CATATAAGGAGACAGCAAGC

Downstream 100 bases:

>100_bases
ACGCATCGACAAAAAGCGCCGACCGACCCGACTTCTCCAGGAAGACTCTCCCCATGCACATGGAAAACTTCGCCCCGATC
ATGTTCGCGGGGCTGATCGT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; Tripartite Transporter Small Subunit; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Large Permease Component; Permease Component Of C4 Dicarboxylate Transporter; TRAP-T Family Tripartite Transporter; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; Transmembrane Transporter Component; TRAP Transporter Small Subunit; TRAP C4-Dicarboxylate Transport System DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Tripartite ATP-Independent Periplasmic; TRAP Dicarboxylate Family Transporter DctQ Subunit; C4-Dicarboxylate Transporter Small Subunit; TRAP-Type Transporter Small Permease Component; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTGLLQLARGMDWVSTRLSKIAGWAVLAAALISAGNALVRYGLDLSSNAWLEIQWYLFGTTVMLGAPVVLKLNEHVRVDI
IYGKLRGRGPVLVDLFGLIFFLLPVMGLLTWLTWPFFWNMYVTKEMSGNIGGLIRWPAALLLPVGFGAVFLQGLAEIVKR
VAYLTGHLQISTHYEKPVQ

Sequences:

>Translated_179_residues
MTGLLQLARGMDWVSTRLSKIAGWAVLAAALISAGNALVRYGLDLSSNAWLEIQWYLFGTTVMLGAPVVLKLNEHVRVDI
IYGKLRGRGPVLVDLFGLIFFLLPVMGLLTWLTWPFFWNMYVTKEMSGNIGGLIRWPAALLLPVGFGAVFLQGLAEIVKR
VAYLTGHLQISTHYEKPVQ
>Mature_178_residues
TGLLQLARGMDWVSTRLSKIAGWAVLAAALISAGNALVRYGLDLSSNAWLEIQWYLFGTTVMLGAPVVLKLNEHVRVDII
YGKLRGRGPVLVDLFGLIFFLLPVMGLLTWLTWPFFWNMYVTKEMSGNIGGLIRWPAALLLPVGFGAVFLQGLAEIVKRV
AYLTGHLQISTHYEKPVQ

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19873; Mature: 19742

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLLQLARGMDWVSTRLSKIAGWAVLAAALISAGNALVRYGLDLSSNAWLEIQWYLFGT
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEEEEEEEHH
TVMLGAPVVLKLNEHVRVDIIYGKLRGRGPVLVDLFGLIFFLLPVMGLLTWLTWPFFWNM
HHHHCCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVTKEMSGNIGGLIRWPAALLLPVGFGAVFLQGLAEIVKRVAYLTGHLQISTHYEKPVQ
HEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCC
>Mature Secondary Structure 
TGLLQLARGMDWVSTRLSKIAGWAVLAAALISAGNALVRYGLDLSSNAWLEIQWYLFGT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEEEEEEEHH
TVMLGAPVVLKLNEHVRVDIIYGKLRGRGPVLVDLFGLIFFLLPVMGLLTWLTWPFFWNM
HHHHCCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVTKEMSGNIGGLIRWPAALLLPVGFGAVFLQGLAEIVKRVAYLTGHLQISTHYEKPVQ
HEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA