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The map label for this gene is ygxB [H]

Identifier: 120610701

GI number: 120610701

Start: 2198564

End: 2199283

Strand: Reverse

Name: ygxB [H]

Synonym: Aave_2021

Alternate gene names: 120610701

Gene position: 2199283-2198564 (Counterclockwise)

Preceding gene: 120610702

Following gene: 120610699

Centisome position: 41.09

GC content: 72.08

Gene sequence:

>720_bases
ATGGACAACCTATCCATCCACCTGGAACCGGCCCGTGCCTTCCTCTTCCAGCTCGGCGCCTACCTGCCGCGCCTGCTCTT
CGCCCTGCTCATCCTCGCGGCGGGCTGGCTGGTGGCGAAGGCCGTGCGCTTCGCGGTCACGCGCGGGCTGCGCGCCATCA
ACTTCCACGTGCTCACCGAACGCGCGGGCCTGGACGACTTCCTGCGGCAGGCCGGCTCGCGCCGCGACGCCACGGCCATC
TTCGGCCTGCTGGCGTACGGCCTGGTGCTGCTGGCGGCCCTGCTGGTCGCCTTCAACAGCCTGGGCCTGAGCTACGTCAC
CGCCCTCCTCAGCCGCGTGCTGTGGTTCATCCCGAACCTCTTCGTCGCGCTGCTGATCCTGGTGCTGGGCACGTATTTCG
GCCGCGTGGTCGGCGAACTCGTCTCCGCGTACCTGCGCCGCGCCGGCATGGCCGACACGGCGCTGCCGGGCAAGGCGGCC
CAGTACGCCATCGTGGTGTTCTCGGTGCTGATCGCGCTCGACCAGCTCGGCATCGGCGGCGACATCGTGCGCCAGAGCTT
CCTCATCCTGCTCGCGGGCGTGGTCTTCGCGCTGGCCCTGGCCTTCGGCCTGGGCGGGCGGGACCGGGCCGCCGAGTGCA
TCGAGCAGTGGTGGCCGCGCCGGCGGCGCGAACCGCCCGCGGGCGCGGACAGGCTGCCGCCCCGGGATCCGCGACCCTGA

Upstream 100 bases:

>100_bases
CGCGGCCGCGGCGCCCACGCCCACGCCGAACCTGCCCGACACCCCCGCCTGACGGCGCCGCCGCTTTCCCGCCACCGACC
GATCCCCGAGGCTTCTTCCC

Downstream 100 bases:

>100_bases
ACGACGCCGGCCCCGGGCCGGCTTTTTCATTTCCCCTCCGGACGCTCCGGCCGCCCCGCCGATCCTGCCGCAGGGTGGAA
TCCACCGGTGCCGGCGGGCT

Product: TM helix repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MDNLSIHLEPARAFLFQLGAYLPRLLFALLILAAGWLVAKAVRFAVTRGLRAINFHVLTERAGLDDFLRQAGSRRDATAI
FGLLAYGLVLLAALLVAFNSLGLSYVTALLSRVLWFIPNLFVALLILVLGTYFGRVVGELVSAYLRRAGMADTALPGKAA
QYAIVVFSVLIALDQLGIGGDIVRQSFLILLAGVVFALALAFGLGGRDRAAECIEQWWPRRRREPPAGADRLPPRDPRP

Sequences:

>Translated_239_residues
MDNLSIHLEPARAFLFQLGAYLPRLLFALLILAAGWLVAKAVRFAVTRGLRAINFHVLTERAGLDDFLRQAGSRRDATAI
FGLLAYGLVLLAALLVAFNSLGLSYVTALLSRVLWFIPNLFVALLILVLGTYFGRVVGELVSAYLRRAGMADTALPGKAA
QYAIVVFSVLIALDQLGIGGDIVRQSFLILLAGVVFALALAFGLGGRDRAAECIEQWWPRRRREPPAGADRLPPRDPRP
>Mature_239_residues
MDNLSIHLEPARAFLFQLGAYLPRLLFALLILAAGWLVAKAVRFAVTRGLRAINFHVLTERAGLDDFLRQAGSRRDATAI
FGLLAYGLVLLAALLVAFNSLGLSYVTALLSRVLWFIPNLFVALLILVLGTYFGRVVGELVSAYLRRAGMADTALPGKAA
QYAIVVFSVLIALDQLGIGGDIVRQSFLILLAGVVFALALAFGLGGRDRAAECIEQWWPRRRREPPAGADRLPPRDPRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008910 [H]

Pfam domain/function: PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 26051; Mature: 26051

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLSIHLEPARAFLFQLGAYLPRLLFALLILAAGWLVAKAVRFAVTRGLRAINFHVLTE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGLDDFLRQAGSRRDATAIFGLLAYGLVLLAALLVAFNSLGLSYVTALLSRVLWFIPNL
HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FVALLILVLGTYFGRVVGELVSAYLRRAGMADTALPGKAAQYAIVVFSVLIALDQLGIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
DIVRQSFLILLAGVVFALALAFGLGGRDRAAECIEQWWPRRRREPPAGADRLPPRDPRP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNLSIHLEPARAFLFQLGAYLPRLLFALLILAAGWLVAKAVRFAVTRGLRAINFHVLTE
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGLDDFLRQAGSRRDATAIFGLLAYGLVLLAALLVAFNSLGLSYVTALLSRVLWFIPNL
HCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FVALLILVLGTYFGRVVGELVSAYLRRAGMADTALPGKAAQYAIVVFSVLIALDQLGIGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
DIVRQSFLILLAGVVFALALAFGLGGRDRAAECIEQWWPRRRREPPAGADRLPPRDPRP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469 [H]